| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yfeH [C]
Identifier: 78067788
GI number: 78067788
Start: 3484170
End: 3485201
Strand: Direct
Name: yfeH [C]
Synonym: Bcep18194_A6319
Alternate gene names: 78067788
Gene position: 3484170-3485201 (Clockwise)
Preceding gene: 78067784
Following gene: 78067789
Centisome position: 94.32
GC content: 69.77
Gene sequence:
>1032_bases ATGGCCCGTCCCCGTTTTCTTCCCGACAACTTCACGCTCGCGCTCGTCGGCACCGTCGTGCTCGCGAGCCTCCTGCCGTG CCGCGGCCCGGCCGCTCACGCGTTCAACTGGGCAACCAACATTGCCGTCGGCCTGCTGTTCTTCCTGCACGGCGCGAAGC TGTCGCGTGAAGCCGTCGTCGCGGGTGCGACGCACTGGCGGCTGCACGCGGTCGTGCTGCTCAGCACGTTCGCGCTGTTC CCGCTGCTCGGCCTTGCGCTGAAACCCGTGCTGCAGCCGCTCGTCACGCCGACGCTGTATGCGGGTGTGCTGTTCCTGTG CACGCTGCCGTCGACGGTCCAGTCGTCGATCGCGTTCACGTCGATCGCGAAGGGCAACGTGCCGGCCGCCGTGTGCGCGG CCTCCGCGTCGAGCCTGCTCGGGATCTTCGTCACGCCGGCGCTCGTCGGGCTGATGATCACGTCGCAGTCGGCGGCCGCC GCGTCGCCGTGGAGCACCGTCGGCAGCATCGTGATGCAGCTGCTCGTGCCGTTCATCGCCGGCCAGTTGCTGCGGCCCGT GATCGGCGGCTGGATCGACCGCAACCGCGGCGTGCTGCGCTTCGTCGACCAGGGCTCGATCCTGCTCGTCGTCTACGTCG CCTTCAGCGAGGCCGTCAACGAAGGCCTGTGGCACCAGATCCCGCCGCGCGCGCTCGGCGGCCTGCTCGTCGTCAACCTC GTGCTGCTCGCGATCGCGCTGTTGCTGACCGCGTTCGTCAGCAAGCGGCTCGGCTTCAACCGCGCCGACCAGATCACGAT CATCTTCTGCGGGTCGAAGAAGAGCCTCGCGGCCGGCGTGCCGATGGCGAAGGTGATCTTCTCGGCGAACGCGGTCGGCG CGATCGTGCTGCCGCTGATGCTGTTCCACCAGATCCAGCTGATGGCGTGCGCGGCGCTCGCGCAGCGCTGGGGGGCGCGC GACATGAGCGGCGAGCACGACGAGGGCGACGCGACGTCGGCGCCCGGCGCGCTGAGCGCAGGCAAGCGCTGA
Upstream 100 bases:
>100_bases CGATTCCCACAATGAATTTGTGTAGTTAATCGCCAACCCGGACAATGGCGCCATCCGCGCGCGCGACGCGCATCTCCGTC GTTTCCGAATCGAGTTCCCG
Downstream 100 bases:
>100_bases CGATCCAGGGCGACGGGACGGCCAGCGAGTGGTGCCGTCCCGGTGTTTCCGCTTTTCCGCTTTTCCGCTTTTCCGCTTTT CCGCTTTTCCGCTTTTCCGC
Product: bile acid/sodium symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MARPRFLPDNFTLALVGTVVLASLLPCRGPAAHAFNWATNIAVGLLFFLHGAKLSREAVVAGATHWRLHAVVLLSTFALF PLLGLALKPVLQPLVTPTLYAGVLFLCTLPSTVQSSIAFTSIAKGNVPAAVCAASASSLLGIFVTPALVGLMITSQSAAA ASPWSTVGSIVMQLLVPFIAGQLLRPVIGGWIDRNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPRALGGLLVVNL VLLAIALLLTAFVSKRLGFNRADQITIIFCGSKKSLAAGVPMAKVIFSANAVGAIVLPLMLFHQIQLMACAALAQRWGAR DMSGEHDEGDATSAPGALSAGKR
Sequences:
>Translated_343_residues MARPRFLPDNFTLALVGTVVLASLLPCRGPAAHAFNWATNIAVGLLFFLHGAKLSREAVVAGATHWRLHAVVLLSTFALF PLLGLALKPVLQPLVTPTLYAGVLFLCTLPSTVQSSIAFTSIAKGNVPAAVCAASASSLLGIFVTPALVGLMITSQSAAA ASPWSTVGSIVMQLLVPFIAGQLLRPVIGGWIDRNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPRALGGLLVVNL VLLAIALLLTAFVSKRLGFNRADQITIIFCGSKKSLAAGVPMAKVIFSANAVGAIVLPLMLFHQIQLMACAALAQRWGAR DMSGEHDEGDATSAPGALSAGKR >Mature_342_residues ARPRFLPDNFTLALVGTVVLASLLPCRGPAAHAFNWATNIAVGLLFFLHGAKLSREAVVAGATHWRLHAVVLLSTFALFP LLGLALKPVLQPLVTPTLYAGVLFLCTLPSTVQSSIAFTSIAKGNVPAAVCAASASSLLGIFVTPALVGLMITSQSAAAA SPWSTVGSIVMQLLVPFIAGQLLRPVIGGWIDRNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPRALGGLLVVNLV LLAIALLLTAFVSKRLGFNRADQITIIFCGSKKSLAAGVPMAKVIFSANAVGAIVLPLMLFHQIQLMACAALAQRWGARD MSGEHDEGDATSAPGALSAGKR
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfeH [H]
Homologues:
Organism=Homo sapiens, GI71725371, Length=304, Percent_Identity=27.6315789473684, Blast_Score=106, Evalue=4e-23, Organism=Escherichia coli, GI1788749, Length=330, Percent_Identity=53.9393939393939, Blast_Score=315, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6323677, Length=353, Percent_Identity=22.0963172804533, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002657 - InterPro: IPR016833 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 35941; Mature: 35810
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPRFLPDNFTLALVGTVVLASLLPCRGPAAHAFNWATNIAVGLLFFLHGAKLSREAVV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AGATHWRLHAVVLLSTFALFPLLGLALKPVLQPLVTPTLYAGVLFLCTLPSTVQSSIAFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SIAKGNVPAAVCAASASSLLGIFVTPALVGLMITSQSAAAASPWSTVGSIVMQLLVPFIA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH GQLLRPVIGGWIDRNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPRALGGLLVVNL HHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VLLAIALLLTAFVSKRLGFNRADQITIIFCGSKKSLAAGVPMAKVIFSANAVGAIVLPLM HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHCCHHHHHHHHHH LFHQIQLMACAALAQRWGARDMSGEHDEGDATSAPGALSAGKR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARPRFLPDNFTLALVGTVVLASLLPCRGPAAHAFNWATNIAVGLLFFLHGAKLSREAVV CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AGATHWRLHAVVLLSTFALFPLLGLALKPVLQPLVTPTLYAGVLFLCTLPSTVQSSIAFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SIAKGNVPAAVCAASASSLLGIFVTPALVGLMITSQSAAAASPWSTVGSIVMQLLVPFIA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH GQLLRPVIGGWIDRNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPRALGGLLVVNL HHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VLLAIALLLTAFVSKRLGFNRADQITIIFCGSKKSLAAGVPMAKVIFSANAVGAIVLPLM HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHCCHHHHHHHHHH LFHQIQLMACAALAQRWGARDMSGEHDEGDATSAPGALSAGKR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]