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The map label for this gene is omp32 [H]

Identifier: 78067786

GI number: 78067786

Start: 3481919

End: 3482995

Strand: Reverse

Name: omp32 [H]

Synonym: Bcep18194_A6317

Alternate gene names: 78067786

Gene position: 3482995-3481919 (Counterclockwise)

Preceding gene: 78067787

Following gene: 78067785

Centisome position: 94.28

GC content: 65.37

Gene sequence:

>1077_bases
ATGAAAGCATTCGCTCGCCGTGCGTCGCGCACGTCCGTCAAGCTGATCGCCGCGGCTGCCTGCGTGGCGGCTACCGCTCC
CGTCCATGCACAGTCGAGCGTGTCGCTCTACGGTCAGGTCGACGAATGGGTCGGCGCAACCAAGTTCCCGGGCGGAGACC
GCGCGTGGAACGTGAGCGGCGGCGGGATGTCGACGTCGTACTGGGGTTTGCACGGCGCCGAGGATCTCGGCAACGGCTAC
AAGGCGATCTTCACGCTGGAAAGCTTCTTCCGCGCGCAGAACGGCCAGTTCGGCCGCTTCCAGGGTGACACGTTCTTCGC
ACGCAACGCATACGTCGGCATCGATTCGCCGTACGGCACGGTGACGGCCGGCCGCCTGACGACGCACCTGTTCCTGTCGA
CGATCCTGTTCAACCCGTTCTACGACTCGTACACCTTCTCGCCGATGGTGTACCACGTGTTCCTCGGCCTCGGCACGTTC
CCGACCTACCCGAGCGACCAGGGTGCCGTCGGCGATTCGGGCTGGAACAACGCGCTGTCGTACACGTCGCCGTCGTTCGG
TGGCCTGAATTTCGGCGCGATGTACGCGCTCGGCAACCAGGCCGGCGACAACGGCTCGAAGAAGTGGAGCGCGCAGTTCA
ACTATGCGAACGGCCCGTTCGCGGCGACCGCGGTCTACCAGTACGTGAACTTCAACAACGGCCCGCGCGACCTGAGCGCG
CTGGTGGCCGGCATGAAGAGCCAGGGCATCGCGCAAGTCGGCGCGACCTACGACCTGAAGTACGTGAAGCTGTTCGGCCA
GTACATGTATACGAAGAATGACCAGGTCGCGGGCAGCTGGCACGTGAATACCGCGCAGGGCGGCGTGTCGGTGCCGCTCG
GCGTCGGCAACGCGATGGCGTCGTACGCGTACTCGCGCGATTCGGGCGGCCTCGACCAGACGCGCCAGACCTGGGCCGTC
GGCTACGACTATCCGCTGTCCAAGCGCACGGACGTCTACGCTGCGTACATGAACGACCACATCAGCGGCCTGTCGACCGG
CAACACGTTCGGCGCCGGCATCCGCGCGAAGTTCTGA

Upstream 100 bases:

>100_bases
GATCCGTAAAGATGGCTGCGCCCCATACGACGCAAGCACTCGGCTCCAAAAAACAACGCTCGCGCCACTTATCGACAATT
CGACAAAATCTGGAGATCCA

Downstream 100 bases:

>100_bases
CGCGCACGCACGACCGCTGCGCCGGACGCGCGTGAAAAGCGCGTCCGAACTGCATGTTTTCCCGCCCAAACGGCGCCGCG
ACCCCGCGGCGCCGTTTTGC

Product: outer membrane protein, (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKAFARRASRTSVKLIAAAACVAATAPVHAQSSVSLYGQVDEWVGATKFPGGDRAWNVSGGGMSTSYWGLHGAEDLGNGY
KAIFTLESFFRAQNGQFGRFQGDTFFARNAYVGIDSPYGTVTAGRLTTHLFLSTILFNPFYDSYTFSPMVYHVFLGLGTF
PTYPSDQGAVGDSGWNNALSYTSPSFGGLNFGAMYALGNQAGDNGSKKWSAQFNYANGPFAATAVYQYVNFNNGPRDLSA
LVAGMKSQGIAQVGATYDLKYVKLFGQYMYTKNDQVAGSWHVNTAQGGVSVPLGVGNAMASYAYSRDSGGLDQTRQTWAV
GYDYPLSKRTDVYAAYMNDHISGLSTGNTFGAGIRAKF

Sequences:

>Translated_358_residues
MKAFARRASRTSVKLIAAAACVAATAPVHAQSSVSLYGQVDEWVGATKFPGGDRAWNVSGGGMSTSYWGLHGAEDLGNGY
KAIFTLESFFRAQNGQFGRFQGDTFFARNAYVGIDSPYGTVTAGRLTTHLFLSTILFNPFYDSYTFSPMVYHVFLGLGTF
PTYPSDQGAVGDSGWNNALSYTSPSFGGLNFGAMYALGNQAGDNGSKKWSAQFNYANGPFAATAVYQYVNFNNGPRDLSA
LVAGMKSQGIAQVGATYDLKYVKLFGQYMYTKNDQVAGSWHVNTAQGGVSVPLGVGNAMASYAYSRDSGGLDQTRQTWAV
GYDYPLSKRTDVYAAYMNDHISGLSTGNTFGAGIRAKF
>Mature_358_residues
MKAFARRASRTSVKLIAAAACVAATAPVHAQSSVSLYGQVDEWVGATKFPGGDRAWNVSGGGMSTSYWGLHGAEDLGNGY
KAIFTLESFFRAQNGQFGRFQGDTFFARNAYVGIDSPYGTVTAGRLTTHLFLSTILFNPFYDSYTFSPMVYHVFLGLGTF
PTYPSDQGAVGDSGWNNALSYTSPSFGGLNFGAMYALGNQAGDNGSKKWSAQFNYANGPFAATAVYQYVNFNNGPRDLSA
LVAGMKSQGIAQVGATYDLKYVKLFGQYMYTKNDQVAGSWHVNTAQGGVSVPLGVGNAMASYAYSRDSGGLDQTRQTWAV
GYDYPLSKRTDVYAAYMNDHISGLSTGNTFGAGIRAKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38389; Mature: 38389

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFARRASRTSVKLIAAAACVAATAPVHAQSSVSLYGQVDEWVGATKFPGGDRAWNVSG
CCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHCCCCCCCCCCEEEEECC
GGMSTSYWGLHGAEDLGNGYKAIFTLESFFRAQNGQFGRFQGDTFFARNAYVGIDSPYGT
CCCCCCCCCCCCHHHHCCCEEEEEEHHHHHHHCCCCCCEECCCEEEECCEEEECCCCCCC
VTAGRLTTHLFLSTILFNPFYDSYTFSPMVYHVFLGLGTFPTYPSDQGAVGDSGWNNALS
EEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
YTSPSFGGLNFGAMYALGNQAGDNGSKKWSAQFNYANGPFAATAVYQYVNFNNGPRDLSA
CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH
LVAGMKSQGIAQVGATYDLKYVKLFGQYMYTKNDQVAGSWHVNTAQGGVSVPLGVGNAMA
HHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCHHHH
SYAYSRDSGGLDQTRQTWAVGYDYPLSKRTDVYAAYMNDHISGLSTGNTFGAGIRAKF
HHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKAFARRASRTSVKLIAAAACVAATAPVHAQSSVSLYGQVDEWVGATKFPGGDRAWNVSG
CCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHCCCCCCCCCCEEEEECC
GGMSTSYWGLHGAEDLGNGYKAIFTLESFFRAQNGQFGRFQGDTFFARNAYVGIDSPYGT
CCCCCCCCCCCCHHHHCCCEEEEEEHHHHHHHCCCCCCEECCCEEEECCEEEECCCCCCC
VTAGRLTTHLFLSTILFNPFYDSYTFSPMVYHVFLGLGTFPTYPSDQGAVGDSGWNNALS
EEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
YTSPSFGGLNFGAMYALGNQAGDNGSKKWSAQFNYANGPFAATAVYQYVNFNNGPRDLSA
CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH
LVAGMKSQGIAQVGATYDLKYVKLFGQYMYTKNDQVAGSWHVNTAQGGVSVPLGVGNAMA
HHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCHHHH
SYAYSRDSGGLDQTRQTWAVGYDYPLSKRTDVYAAYMNDHISGLSTGNTFGAGIRAKF
HHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]