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The map label for this gene is ybgL [C]

Identifier: 78067749

GI number: 78067749

Start: 3442328

End: 3443110

Strand: Direct

Name: ybgL [C]

Synonym: Bcep18194_A6280

Alternate gene names: 78067749

Gene position: 3442328-3443110 (Clockwise)

Preceding gene: 78067747

Following gene: 78067750

Centisome position: 93.18

GC content: 67.82

Gene sequence:

>783_bases
ATGAGGAAGCACAGCGTCGACCTGAACTCCGACATGGGAGAGGGCTTCGGTCCGTGGACGATCGGCGACGGCGTCGACGA
GCAGATCATGCCGCTCATCAGCTCGGCAAACATCGCCACCGGCTTTCACGCCGGCGATCCGAACATCATGGCGCGCACGG
TGCAGCTCGCGCGCGACGCCGGCGTCGGCATCGGCGCGCACCCGGGCTTTCGCGATCTCGTCGGCTTCGGCCGCCGCACG
ATCGCCGAAACGCCGCAGGCGCTCGTCAACGACATCCTGTACCAGCTCGGCGCACTGCGCGAGTTCGCGCGCCTGAACGG
CGTCACCCTGCAGCACGTGAAGCCGCACGGCGCGCTCTACATGCATGCAGCAGGCAACGAAGCGTTCTCACGGTTGCTGA
TCGAAACGCTGCAGCGCGTCGACCCGGGCCTGTGGCTGTACTGCATGGAAGCGTCGGTCACGTACCGCGTCGCCGTCGAA
TACGGGCAGCCGGTGATCCGCGAGTTCTACGCGGATCGCGACTACGACCGCAGCGGTTCGATCGTGTTCACGCGTCGCGT
CGGCCGCCTCGATCCGCGCCAGGTCGCCGACAAGGTGCTGCGCGCGTGCATCGACGGCAAGGTGCGCACGATCGACGGCG
ACGACATCGACATCGACTTCGACTCGGTCTGCATCCACAGCGACACGCCGGGCGCGCTCGACCTCGTGCGCGAAACGCGC
CACGCGCTGATCCGCGAAGGCATCCGGACCGCCGGGCCGCAACCGCTCGCCGCCCATCACTGA

Upstream 100 bases:

>100_bases
GAACTTTTTTGACGCACCCCACGCGGCTAACCTGCGTTCAACACGGTTTCGGCATGCGCCACGACGCACGCGAACCGGAG
AACCTGGAGGAGCACACCGT

Downstream 100 bases:

>100_bases
TTCAAGGAGACCCACGATGGCATTGCACGATATCGTCAGCCCGCTGCCGGGCACCTTCTACCGGCGTCCGTCGCCCGATG
CGGACTACTACGTCGCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRKHSVDLNSDMGEGFGPWTIGDGVDEQIMPLISSANIATGFHAGDPNIMARTVQLARDAGVGIGAHPGFRDLVGFGRRT
IAETPQALVNDILYQLGALREFARLNGVTLQHVKPHGALYMHAAGNEAFSRLLIETLQRVDPGLWLYCMEASVTYRVAVE
YGQPVIREFYADRDYDRSGSIVFTRRVGRLDPRQVADKVLRACIDGKVRTIDGDDIDIDFDSVCIHSDTPGALDLVRETR
HALIREGIRTAGPQPLAAHH

Sequences:

>Translated_260_residues
MRKHSVDLNSDMGEGFGPWTIGDGVDEQIMPLISSANIATGFHAGDPNIMARTVQLARDAGVGIGAHPGFRDLVGFGRRT
IAETPQALVNDILYQLGALREFARLNGVTLQHVKPHGALYMHAAGNEAFSRLLIETLQRVDPGLWLYCMEASVTYRVAVE
YGQPVIREFYADRDYDRSGSIVFTRRVGRLDPRQVADKVLRACIDGKVRTIDGDDIDIDFDSVCIHSDTPGALDLVRETR
HALIREGIRTAGPQPLAAHH
>Mature_260_residues
MRKHSVDLNSDMGEGFGPWTIGDGVDEQIMPLISSANIATGFHAGDPNIMARTVQLARDAGVGIGAHPGFRDLVGFGRRT
IAETPQALVNDILYQLGALREFARLNGVTLQHVKPHGALYMHAAGNEAFSRLLIETLQRVDPGLWLYCMEASVTYRVAVE
YGQPVIREFYADRDYDRSGSIVFTRRVGRLDPRQVADKVLRACIDGKVRTIDGDDIDIDFDSVCIHSDTPGALDLVRETR
HALIREGIRTAGPQPLAAHH

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=248, Percent_Identity=37.5, Blast_Score=160, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 28612; Mature: 28612

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHSVDLNSDMGEGFGPWTIGDGVDEQIMPLISSANIATGFHAGDPNIMARTVQLARDA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHC
GVGIGAHPGFRDLVGFGRRTIAETPQALVNDILYQLGALREFARLNGVTLQHVKPHGALY
CCCCCCCCCHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE
MHAAGNEAFSRLLIETLQRVDPGLWLYCMEASVTYRVAVEYGQPVIREFYADRDYDRSGS
EEECCHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCHHHHHHHCCCCCCCCCC
IVFTRRVGRLDPRQVADKVLRACIDGKVRTIDGDDIDIDFDSVCIHSDTPGALDLVRETR
EEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEECCCCEEEECCCCHHHHHHHHHH
HALIREGIRTAGPQPLAAHH
HHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRKHSVDLNSDMGEGFGPWTIGDGVDEQIMPLISSANIATGFHAGDPNIMARTVQLARDA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHC
GVGIGAHPGFRDLVGFGRRTIAETPQALVNDILYQLGALREFARLNGVTLQHVKPHGALY
CCCCCCCCCHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE
MHAAGNEAFSRLLIETLQRVDPGLWLYCMEASVTYRVAVEYGQPVIREFYADRDYDRSGS
EEECCHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCHHHHHHHCCCCCCCCCC
IVFTRRVGRLDPRQVADKVLRACIDGKVRTIDGDDIDIDFDSVCIHSDTPGALDLVRETR
EEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEECCCCEEEECCCCHHHHHHHHHH
HALIREGIRTAGPQPLAAHH
HHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA