| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ucpA [C]
Identifier: 78067734
GI number: 78067734
Start: 3424624
End: 3425397
Strand: Direct
Name: ucpA [C]
Synonym: Bcep18194_A6265
Alternate gene names: 78067734
Gene position: 3424624-3425397 (Clockwise)
Preceding gene: 78067733
Following gene: 78067735
Centisome position: 92.7
GC content: 70.28
Gene sequence:
>774_bases ATGACTACTCCGCTGAAGGTCTTCATCACCGGCGCATCGAGCGGCCTCGGCCTCGCGATGGCCGAGGAATACGCCCGCCA GGGCGCCACGCTCGCACTCGTCGCGCGACGCACCGAGGCTCTCGATGCGTTCGCGCGGCGCTTCCCGAAGCTGTCCATCT CCGTCTATTCCGCCGACGTGCGCAACGCCGAAGCGCTCGCGACGGCCGCTGCGTCGTTCATCGCGACGCACGGCTGCCCC GACGTCGTGATCGCGAACGCAGGCATCAGCCAGGGCGCCGTCACGGGCCAGGGCGATCTCGCGACGTTTCGCGACGTGAT GGACATCAACTACTACGGGATGGTCGCGACGTTCGAGCCGTTCGTCGCCCCGATGACGGCCACGCGCCACGGCACGCTGG TCGGTGTCGCGAGCGTCGCCGGCGTGCGCGGGCTGCCCGGCTCCGGTGCGTACAGCGCGTCGAAATCGGCCGCGATCAAG TATCTCGAAGCGCTGCGCGTCGAGCTGCGGCCCGCCGGCGTCGGCGTCGTGACGATCGCGCCCGGCTACATCCGTACGCC GATGACCGCGCACAACCCGTACCGGATGCCGTTCCTGATGGACGCCGACCGCTTCGCCGCGCGTGCGGCCCAGGCGATCG CGCGGCAGCACGCGTTCCGCGTGATTCCGTGGCAGATGGGCGTCGTCGCGAAGGTGCTGCACGTGCTGCCGCGCTGGCTG TACGACCGCCTGTTCGAGAAGGCGCCGCGCAAGCCGAAGGCGGGGGCGCACTGA
Upstream 100 bases:
>100_bases CCCGCTTACGCGAACAGCATCCCGGGCACGGCCCAGGTGCTCGACTTCCTCGTGAAGCAGGTTCAGGACAAGAAGCTCTG ATCCCCGCCCGCGCGCCGGC
Downstream 100 bases:
>100_bases CGCTCCGGTGAGCACCGGCCCGCGCGAAGCTTCGCGGGCCGTCTCTCCGCTTCTCCGCCTTCCGCCTTCCGCCTTCCGCC TTCCGCCTTCCGCCTTCCGC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTTPLKVFITGASSGLGLAMAEEYARQGATLALVARRTEALDAFARRFPKLSISVYSADVRNAEALATAAASFIATHGCP DVVIANAGISQGAVTGQGDLATFRDVMDINYYGMVATFEPFVAPMTATRHGTLVGVASVAGVRGLPGSGAYSASKSAAIK YLEALRVELRPAGVGVVTIAPGYIRTPMTAHNPYRMPFLMDADRFAARAAQAIARQHAFRVIPWQMGVVAKVLHVLPRWL YDRLFEKAPRKPKAGAH
Sequences:
>Translated_257_residues MTTPLKVFITGASSGLGLAMAEEYARQGATLALVARRTEALDAFARRFPKLSISVYSADVRNAEALATAAASFIATHGCP DVVIANAGISQGAVTGQGDLATFRDVMDINYYGMVATFEPFVAPMTATRHGTLVGVASVAGVRGLPGSGAYSASKSAAIK YLEALRVELRPAGVGVVTIAPGYIRTPMTAHNPYRMPFLMDADRFAARAAQAIARQHAFRVIPWQMGVVAKVLHVLPRWL YDRLFEKAPRKPKAGAH >Mature_256_residues TTPLKVFITGASSGLGLAMAEEYARQGATLALVARRTEALDAFARRFPKLSISVYSADVRNAEALATAAASFIATHGCPD VVIANAGISQGAVTGQGDLATFRDVMDINYYGMVATFEPFVAPMTATRHGTLVGVASVAGVRGLPGSGAYSASKSAAIKY LEALRVELRPAGVGVVTIAPGYIRTPMTAHNPYRMPFLMDADRFAARAAQAIARQHAFRVIPWQMGVVAKVLHVLPRWLY DRLFEKAPRKPKAGAH
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=31.0880829015544, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI7706318, Length=196, Percent_Identity=29.0816326530612, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI40807363, Length=231, Percent_Identity=29.4372294372294, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI157739938, Length=191, Percent_Identity=28.7958115183246, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI4758504, Length=244, Percent_Identity=31.1475409836066, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4503817, Length=202, Percent_Identity=32.6732673267327, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI142976729, Length=260, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI31543615, Length=226, Percent_Identity=24.7787610619469, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI7657478, Length=191, Percent_Identity=29.3193717277487, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI310128830, Length=248, Percent_Identity=28.2258064516129, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI310115468, Length=248, Percent_Identity=28.2258064516129, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI223718074, Length=191, Percent_Identity=33.5078534031414, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI210032110, Length=242, Percent_Identity=23.9669421487603, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI40254992, Length=181, Percent_Identity=27.0718232044199, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI150247226, Length=216, Percent_Identity=30.5555555555556, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI109715829, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI32483357, Length=201, Percent_Identity=25.8706467661692, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI87082100, Length=218, Percent_Identity=31.1926605504587, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1786701, Length=186, Percent_Identity=32.258064516129, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=26.2569832402235, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787335, Length=230, Percent_Identity=25.6521739130435, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17508895, Length=243, Percent_Identity=26.7489711934156, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17567345, Length=225, Percent_Identity=28.8888888888889, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17570069, Length=186, Percent_Identity=32.258064516129, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI71997402, Length=186, Percent_Identity=30.6451612903226, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17507613, Length=191, Percent_Identity=31.9371727748691, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32563809, Length=191, Percent_Identity=31.9371727748691, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17555706, Length=203, Percent_Identity=29.5566502463054, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17564282, Length=241, Percent_Identity=26.1410788381743, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193203115, Length=224, Percent_Identity=26.3392857142857, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193203117, Length=224, Percent_Identity=26.3392857142857, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71994604, Length=186, Percent_Identity=28.494623655914, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17563726, Length=188, Percent_Identity=28.7234042553192, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534660, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147288, Length=188, Percent_Identity=26.063829787234, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=229, Percent_Identity=28.82096069869, Blast_Score=82, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6322067, Length=195, Percent_Identity=29.2307692307692, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320089, Length=194, Percent_Identity=25.7731958762887, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI21358495, Length=191, Percent_Identity=31.413612565445, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI23397609, Length=203, Percent_Identity=32.512315270936, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI21357041, Length=188, Percent_Identity=30.8510638297872, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI24649181, Length=264, Percent_Identity=25.7575757575758, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24644339, Length=207, Percent_Identity=31.4009661835749, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI28571526, Length=185, Percent_Identity=30.2702702702703, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355631, Length=205, Percent_Identity=29.2682926829268, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI281364892, Length=216, Percent_Identity=26.8518518518519, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24640442, Length=188, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24580925, Length=190, Percent_Identity=30, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI17737361, Length=249, Percent_Identity=28.1124497991968, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24640492, Length=241, Percent_Identity=27.3858921161826, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24639444, Length=189, Percent_Identity=26.984126984127, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24641388, Length=193, Percent_Identity=32.1243523316062, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24581726, Length=254, Percent_Identity=25.1968503937008, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355319, Length=185, Percent_Identity=26.4864864864865, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24644337, Length=185, Percent_Identity=33.5135135135135, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 27361; Mature: 27230
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLKVFITGASSGLGLAMAEEYARQGATLALVARRTEALDAFARRFPKLSISVYSADV CCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEECCC RNAEALATAAASFIATHGCPDVVIANAGISQGAVTGQGDLATFRDVMDINYYGMVATFEP CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC FVAPMTATRHGTLVGVASVAGVRGLPGSGAYSASKSAAIKYLEALRVELRPAGVGVVTIA HHCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCEEEEEEC PGYIRTPMTAHNPYRMPFLMDADRFAARAAQAIARQHAFRVIPWQMGVVAKVLHVLPRWL CCHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHH YDRLFEKAPRKPKAGAH HHHHHHHCCCCCCCCCC >Mature Secondary Structure TTPLKVFITGASSGLGLAMAEEYARQGATLALVARRTEALDAFARRFPKLSISVYSADV CCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEECCC RNAEALATAAASFIATHGCPDVVIANAGISQGAVTGQGDLATFRDVMDINYYGMVATFEP CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC FVAPMTATRHGTLVGVASVAGVRGLPGSGAYSASKSAAIKYLEALRVELRPAGVGVVTIA HHCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCEEEEEEC PGYIRTPMTAHNPYRMPFLMDADRFAARAAQAIARQHAFRVIPWQMGVVAKVLHVLPRWL CCHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHH YDRLFEKAPRKPKAGAH HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1730672 [H]