| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ycgM [C]
Identifier: 78067724
GI number: 78067724
Start: 3412512
End: 3413504
Strand: Reverse
Name: ycgM [C]
Synonym: Bcep18194_A6255
Alternate gene names: 78067724
Gene position: 3413504-3412512 (Counterclockwise)
Preceding gene: 78067730
Following gene: 78067723
Centisome position: 92.4
GC content: 68.78
Gene sequence:
>993_bases ATGAAACTTGCTTCGCTGAAGGACGGCACGCGCGACGGCCAGCTGATCGTCGTGTCGCGCGACCTGCACACCGCGGCGAT CGCCGACGCGATCGCGCCGACGCTGCAGCGCGTCCTCGACGACTGGGCGTTCTACGCGCCGCAGCTGCGCGACCTGTACG ACGCGCTGAACCACGGCCGCGCGCGCAATGCCTTCACGTTCGATCCGGCCAACTGCATGGCGCCGCTGCCGCGAGCGTTC CAGTGGGCCGACGGCTCCGCGTACGTGAACCACGTCGAGCTCGTGCGCCGCGCGCGCGGCGCGGAGATGCCGCCCGAATT CTGGACCGACCCGCTGATGTACCAGGGCGGCAGCGACGATTTTCTCGGGGCCCGCGACGACGTCGTGTGCCCGTCCGAGG AATGGGGCGTCGATTTCGAGGCGGAAGTCGCGGTGATCACCGGCGACGTGCGGATGAGCGCGACGCCCGACGAAGCGCTG AAGGCCGTGCGGCTCGTCACGCTCGTGAACGACGTGTCGCTGCGCAACCTGATTCCGGCCGAGCTCGCGAAGGGCTTTGG CTTCTTCCAGAGCAAGCCGGCTACCGCGTTCGCGCCGGTCGCCGTGACGCCCGACGAGCTCGGCGACGAATGGCGCGAAG GCCGCGTGCACCGGCCGATGATCGTCCACTGGAACGGCAAGAAGGTCGGCCAGCCCGATGCGGGCACCGACATGGTGTTC CACTTCGGCCAGCTGGTCGCGCATGCGGCGAAGACGCGCAACCTGCGCGCCGGCTCGATCGTCGGCTCGGGCACGGTGTC GAACAAGGACGCGAAGCGCGGCTATTGCTGCATCGCCGAGAAGCGCTGCCTCGAGACGATCGAGCACGGTGCGCCGCAGA CCGAATTCATGCGCTACGGCGATACCGTGCGCATCGAGATGTTCGACACGGCCGGCAAGTCGATCTTCGGTGCGATCGAG CAGTCGGTCGCCCCGCCGGACGGCGCGGCGTAA
Upstream 100 bases:
>100_bases AATCGGGGCGAAAACGGCGCGCACAATCGCGGCGCGCCGCAGGGATTCACCATCGTAAAATAGATTCCCTCCATCGTCAC TACAACGCCAGAGTCCCCTT
Downstream 100 bases:
>100_bases GTCACGCGGAGCGCGTAGCGCTCCGCGTTCGCGAAACCCGGGCCCGGCCCGCGCGCCGGGTTTCGCCTGATGTTTGCCCG CGCGGGCTTGGCTACACTCG
Product: fumarylacetoacetate (FAA) hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Hydroxylase; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGRARNAFTFDPANCMAPLPRAF QWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDDFLGARDDVVCPSEEWGVDFEAEVAVITGDVRMSATPDEAL KAVRLVTLVNDVSLRNLIPAELAKGFGFFQSKPATAFAPVAVTPDELGDEWREGRVHRPMIVHWNGKKVGQPDAGTDMVF HFGQLVAHAAKTRNLRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYGDTVRIEMFDTAGKSIFGAIE QSVAPPDGAA
Sequences:
>Translated_330_residues MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGRARNAFTFDPANCMAPLPRAF QWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDDFLGARDDVVCPSEEWGVDFEAEVAVITGDVRMSATPDEAL KAVRLVTLVNDVSLRNLIPAELAKGFGFFQSKPATAFAPVAVTPDELGDEWREGRVHRPMIVHWNGKKVGQPDAGTDMVF HFGQLVAHAAKTRNLRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYGDTVRIEMFDTAGKSIFGAIE QSVAPPDGAA >Mature_330_residues MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGRARNAFTFDPANCMAPLPRAF QWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDDFLGARDDVVCPSEEWGVDFEAEVAVITGDVRMSATPDEAL KAVRLVTLVNDVSLRNLIPAELAKGFGFFQSKPATAFAPVAVTPDELGDEWREGRVHRPMIVHWNGKKVGQPDAGTDMVF HFGQLVAHAAKTRNLRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYGDTVRIEMFDTAGKSIFGAIE QSVAPPDGAA
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36063; Mature: 36063
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGR CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC ARNAFTFDPANCMAPLPRAFQWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDD CCCCEEECCHHHHCCCCHHEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEECCCCCC FLGARDDVVCPSEEWGVDFEAEVAVITGDVRMSATPDEALKAVRLVTLVNDVSLRNLIPA CCCCCCCCCCCCHHHCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHH ELAKGFGFFQSKPATAFAPVAVTPDELGDEWREGRVHRPMIVHWNGKKVGQPDAGTDMVF HHHHHCCCCCCCCCCEEECEEECHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHH HFGQLVAHAAKTRNLRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYG HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHCC DTVRIEMFDTAGKSIFGAIEQSVAPPDGAA CEEEEEEECCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGR CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC ARNAFTFDPANCMAPLPRAFQWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDD CCCCEEECCHHHHCCCCHHEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEECCCCCC FLGARDDVVCPSEEWGVDFEAEVAVITGDVRMSATPDEALKAVRLVTLVNDVSLRNLIPA CCCCCCCCCCCCHHHCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHH ELAKGFGFFQSKPATAFAPVAVTPDELGDEWREGRVHRPMIVHWNGKKVGQPDAGTDMVF HHHHHCCCCCCCCCCEEECEEECHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHH HFGQLVAHAAKTRNLRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYG HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHCC DTVRIEMFDTAGKSIFGAIEQSVAPPDGAA CEEEEEEECCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA