| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067680
Identifier: 78067680
GI number: 78067680
Start: 3365599
End: 3366171
Strand: Reverse
Name: 78067680
Synonym: Bcep18194_A6211
Alternate gene names: NA
Gene position: 3366171-3365599 (Counterclockwise)
Preceding gene: 78067682
Following gene: 78067678
Centisome position: 91.12
GC content: 71.9
Gene sequence:
>573_bases ATGCCGAAGGAAGTCACCGTTTCGTTGCGCCCCCTTTTTCGTCCGCTGCGACACTTCGCCGCGCTTGCGTGCCTGAGCGC GGTGCTGGCCGCGTGCTCGCCGTCGTACGACTGGCGCACGCTGCACAACGATGCCGGCTACACGATCGACCTGCCGGCGA AGCCGACCGTCGAGGAGCAGCCGGTGGCGATCGGCGGCGCGTCGATGCCGATGCGGATGCAGGCTGCGCACGTGGACGGC GCGGTGTTCGCGGTCGGCACGCTGACGCTGCCGGACGACCGTGACGACACGCGCCGCGCGGCGCTCGAATTCCTGCGCGC CGGGCTGTCCCGCAACCTCGAAGGCGCGCCGCAGACGGCTTCGGTGCCCGTGCCGCTCGCGGCCGGCGGCGCGGTGAACG GGCTCGAGCTGCGCATCGCGGGCGCGGCCGCCGGCGGCGATCGCACGCACAAGACGATCGTCGCACGGCTCGCCGCGCGC GGCCGGCACGCGTACCAGGCCGTCGTGATTGCCGACGGGCCGCTGACGCAGGAGCAGCTGGACCAGTTTTTCGGGTCGTT CAAACTCGACTGA
Upstream 100 bases:
>100_bases CTCATTTTAGCGCGAATGCGGCAAGCGTACCGACGGCGGCCACGCATCCCGGATTTCAGCTTCAGCGGATAATGCCCGTT TTGCCTGCCCGATCCACGCC
Downstream 100 bases:
>100_bases CGGCGGCCGGAGAGGGCGCTCAGACACTCTGTGACAACTGAAAGTTCATTCGCAGCTTTCGACGCTAGTCGCCGGATTTT GCGGGGTTTTTTCGACTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPKEVTVSLRPLFRPLRHFAALACLSAVLAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVAIGGASMPMRMQAAHVDG AVFAVGTLTLPDDRDDTRRAALEFLRAGLSRNLEGAPQTASVPVPLAAGGAVNGLELRIAGAAAGGDRTHKTIVARLAAR GRHAYQAVVIADGPLTQEQLDQFFGSFKLD
Sequences:
>Translated_190_residues MPKEVTVSLRPLFRPLRHFAALACLSAVLAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVAIGGASMPMRMQAAHVDG AVFAVGTLTLPDDRDDTRRAALEFLRAGLSRNLEGAPQTASVPVPLAAGGAVNGLELRIAGAAAGGDRTHKTIVARLAAR GRHAYQAVVIADGPLTQEQLDQFFGSFKLD >Mature_189_residues PKEVTVSLRPLFRPLRHFAALACLSAVLAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVAIGGASMPMRMQAAHVDGA VFAVGTLTLPDDRDDTRRAALEFLRAGLSRNLEGAPQTASVPVPLAAGGAVNGLELRIAGAAAGGDRTHKTIVARLAARG RHAYQAVVIADGPLTQEQLDQFFGSFKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20109; Mature: 19978
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKEVTVSLRPLFRPLRHFAALACLSAVLAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQ CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCCCCCC PVAIGGASMPMRMQAAHVDGAVFAVGTLTLPDDRDDTRRAALEFLRAGLSRNLEGAPQTA CEEECCCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SVPVPLAAGGAVNGLELRIAGAAAGGDRTHKTIVARLAARGRHAYQAVVIADGPLTQEQL CCCCCEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHH DQFFGSFKLD HHHHCCCCCC >Mature Secondary Structure PKEVTVSLRPLFRPLRHFAALACLSAVLAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQ CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCCCCCC PVAIGGASMPMRMQAAHVDGAVFAVGTLTLPDDRDDTRRAALEFLRAGLSRNLEGAPQTA CEEECCCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SVPVPLAAGGAVNGLELRIAGAAAGGDRTHKTIVARLAARGRHAYQAVVIADGPLTQEQL CCCCCEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHH DQFFGSFKLD HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA