Click here to switch to the map view.

The map label for this gene is bioC [C]

Identifier: 78067647

GI number: 78067647

Start: 3327010

End: 3327975

Strand: Reverse

Name: bioC [C]

Synonym: Bcep18194_A6178

Alternate gene names: 78067647

Gene position: 3327975-3327010 (Counterclockwise)

Preceding gene: 78067650

Following gene: 78067646

Centisome position: 90.09

GC content: 70.7

Gene sequence:

>966_bases
ATGTCCCCAGCTTCGACTTCAACCGGCCGTCCGGCCAATGACGCAAGGCGCCTGCGGCGGATTTTCGACCGCCGTGCCGC
CACGTTCGATGCGGTCGCGTTCCTGCCGCGCGAGATCGCGCAGCGCATGAACGAGCGCCTCGAATACATCAAGGTGAGCC
CCGCAGCCGTGCTGGACGCGGGTTGCGGCCCGGGCGACGATCTGCCGGCGCTGCGCGCACGCTTTCCGGAGGCGCCCGTA
TTCGGCGTCGATCTGTCCGGTGCGATGCTCGCACGAGCGGGGCAGCGCGAGGTCGAGCAGACGAGCTGGCGCCGCTGGCT
GCCGGCCTCGCTCGGCCGCGCCCTGGGCCAGCGCGGCCCGCGCGTCGCGCAGGCCGATTTCGCCGCGCTGCCGTTCCCCG
GCGGCGCATTCGACCTGATCTGGTCGAATCTCGCCCTCCACTGGCATTCGCGCCCGGACGCGGTGTTGCCCGAATGGCAG
CGCGTGCTGCGCGTGAACGGGCTGCTGATGTTCAGCACGCTCGGCCCCGATACGCTGCGTGAACTGCGCGCGGCCTGCGC
GGACGCCGAGGCGGCGCTCGGCATGGCGCCGCCCGCCGCGCGCGTGATCGATTTCGTCGACATGCACGACCTCGGCGACA
TGCTCGTCGAGAGCGGCTTCGAGATTCCCGTGATGGATCAGGAAGTGCTGACCGTCACCTACAAATCCCCCGACTCCCTG
CTGGCCGACGTGCGCCGCTGGGGCGCCTATCCGTTCGACCGCGAGGCGCCGCAGCGCGCGACACGGCGCTTCCGCGCGGC
GCTCGGCGATGCGCTGGAGGCCCGCCGGCGCGCGGACGGCACGATTCCGCTGACGTTCGAAGTGATCTACGGCCACGCGT
GGAAGGCCGTACCGCGCACGACAGCCGAAGGGCATGGGATCGTGCGCATCGAGGACATCGGCAAGGGGCGTCCGAAGAAT
CGGTAA

Upstream 100 bases:

>100_bases
GGGCGGAACTGCGGATCATCGCAACACTCCTGACACCCCGCCTCAATGAAGCCCGCGGGGCGAGCGAGTATACTTCGGGC
TCTTCGCCAGTGTGCCCGAC

Downstream 100 bases:

>100_bases
AGCGGTAAAGAGGGGTTTTGTTATGTCTGAAATTAGCGGCGCAAAGCGGGGTCGAATTGGCGCCTAAAATGGCCGAAAAG
CTTGTCGCGCTTGGCTCGCG

Product: ubiquinone/menaquinone biosynthesis methylase-like protein

Products: NA

Alternate protein names: Methyltransferase Type; Biotin Synthesis Protein BioC; Biotin Synthesis Protein; Methyltransferase; SAM-Dependent Methyltransferase; Biotin Synthesis Protein Bioc; Biotin Synthase BioC; Methyltransferase Domain Family; Biotin Biosynthesis-Like Protein; LOW QUALITY PROTEIN Biotin Synthesis Protein; S-Adenosyl-L-Methionine-Dependent Methyltransferases; Methyltransferase Domain-Containing Protein; BIOTIN SYNSIS METHYLTRANSFERASE BioC; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Biotin Synthesis BioC Proein; Biotin Biosynthesis Methyltransferase BioC; UDP-N-Acetylglucosamine 1-Carboxyvinyltransferase; Biotin Biosynthesis Protein Bioc; SAM-Dependent Methyltransferase Protein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSPASTSTGRPANDARRLRRIFDRRAATFDAVAFLPREIAQRMNERLEYIKVSPAAVLDAGCGPGDDLPALRARFPEAPV
FGVDLSGAMLARAGQREVEQTSWRRWLPASLGRALGQRGPRVAQADFAALPFPGGAFDLIWSNLALHWHSRPDAVLPEWQ
RVLRVNGLLMFSTLGPDTLRELRAACADAEAALGMAPPAARVIDFVDMHDLGDMLVESGFEIPVMDQEVLTVTYKSPDSL
LADVRRWGAYPFDREAPQRATRRFRAALGDALEARRRADGTIPLTFEVIYGHAWKAVPRTTAEGHGIVRIEDIGKGRPKN
R

Sequences:

>Translated_321_residues
MSPASTSTGRPANDARRLRRIFDRRAATFDAVAFLPREIAQRMNERLEYIKVSPAAVLDAGCGPGDDLPALRARFPEAPV
FGVDLSGAMLARAGQREVEQTSWRRWLPASLGRALGQRGPRVAQADFAALPFPGGAFDLIWSNLALHWHSRPDAVLPEWQ
RVLRVNGLLMFSTLGPDTLRELRAACADAEAALGMAPPAARVIDFVDMHDLGDMLVESGFEIPVMDQEVLTVTYKSPDSL
LADVRRWGAYPFDREAPQRATRRFRAALGDALEARRRADGTIPLTFEVIYGHAWKAVPRTTAEGHGIVRIEDIGKGRPKN
R
>Mature_320_residues
SPASTSTGRPANDARRLRRIFDRRAATFDAVAFLPREIAQRMNERLEYIKVSPAAVLDAGCGPGDDLPALRARFPEAPVF
GVDLSGAMLARAGQREVEQTSWRRWLPASLGRALGQRGPRVAQADFAALPFPGGAFDLIWSNLALHWHSRPDAVLPEWQR
VLRVNGLLMFSTLGPDTLRELRAACADAEAALGMAPPAARVIDFVDMHDLGDMLVESGFEIPVMDQEVLTVTYKSPDSLL
ADVRRWGAYPFDREAPQRATRRFRAALGDALEARRRADGTIPLTFEVIYGHAWKAVPRTTAEGHGIVRIEDIGKGRPKNR

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=327, Percent_Identity=25.6880733944954, Blast_Score=88, Evalue=9e-18,
Organism=Escherichia coli, GI1786994, Length=129, Percent_Identity=34.8837209302326, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17535003, Length=311, Percent_Identity=26.0450160771704, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI19922210, Length=312, Percent_Identity=28.2051282051282, Blast_Score=88, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35426; Mature: 35295

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPASTSTGRPANDARRLRRIFDRRAATFDAVAFLPREIAQRMNERLEYIKVSPAAVLDA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHCC
GCGPGDDLPALRARFPEAPVFGVDLSGAMLARAGQREVEQTSWRRWLPASLGRALGQRGP
CCCCCCCCCHHHHCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCC
RVAQADFAALPFPGGAFDLIWSNLALHWHSRPDAVLPEWQRVLRVNGLLMFSTLGPDTLR
CCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCEEEEECCCHHHHH
ELRAACADAEAALGMAPPAARVIDFVDMHDLGDMLVESGFEIPVMDQEVLTVTYKSPDSL
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHH
LADVRRWGAYPFDREAPQRATRRFRAALGDALEARRRADGTIPLTFEVIYGHAWKAVPRT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHCCCC
TAEGHGIVRIEDIGKGRPKNR
CCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
SPASTSTGRPANDARRLRRIFDRRAATFDAVAFLPREIAQRMNERLEYIKVSPAAVLDA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHCC
GCGPGDDLPALRARFPEAPVFGVDLSGAMLARAGQREVEQTSWRRWLPASLGRALGQRGP
CCCCCCCCCHHHHCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCC
RVAQADFAALPFPGGAFDLIWSNLALHWHSRPDAVLPEWQRVLRVNGLLMFSTLGPDTLR
CCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCEEEEECCCHHHHH
ELRAACADAEAALGMAPPAARVIDFVDMHDLGDMLVESGFEIPVMDQEVLTVTYKSPDSL
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHH
LADVRRWGAYPFDREAPQRATRRFRAALGDALEARRRADGTIPLTFEVIYGHAWKAVPRT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHCCCC
TAEGHGIVRIEDIGKGRPKNR
CCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA