| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067566
Identifier: 78067566
GI number: 78067566
Start: 3241826
End: 3242641
Strand: Direct
Name: 78067566
Synonym: Bcep18194_A6097
Alternate gene names: NA
Gene position: 3241826-3242641 (Clockwise)
Preceding gene: 78067565
Following gene: 78067567
Centisome position: 87.76
GC content: 72.3
Gene sequence:
>816_bases ATGACACTCACCGCCTTCATCGAAAGCATCGGCCTGATCGGCCCCGGATTGACCGACTGGCCGCACGCGGCCGACGTGCT CGCGGGCCACGCACCGTATGCGCCCGCCCGCACCGAGCTGCCGCCGCCAGCCGGCCTGCCGTCGGCCGAGCGGCGCCGCA CCGGCCCCGTCGTGCGCGTGGCGCTCGCGGCCGGCCACGAAGCGGTGGCCGCGAGCGGACGCGACGCCGCGACGCTCGCG ACCGTGTTCAGCGCATCGGGCGGCGACGGCCAGAATTGCCACGCGATCTGCGAGACGCTCGCCGGTGACGATCGCCAGCT GTCGCCGACGCGCTTCCACAATTCCGTGCACAACGCACCGGCCGGCTACTGGAGCATCGCGACCCGCGCGATGGCGACGT CGAACGTGCTGTGCGCGCACGACGGCAGCTTTGCCGCGGGCCTGCTCGAAAGCCTGTGCCAGGTCGTGGTCGATCGCGTG CCGAGCCTGCTGATCGCGTACGACACCGACTATCCTGAACCGCTGCGCGCGGTGCGCCCGATCGGCGACGCATTCGGCGT GGCCCTCGTGCTCGCGCCCGAACCGAGCGAACGCGCGCTCGCCCGTATCGACGTGCAACTCACCGACGCGCCCGCCACGA CGCTCGCGCATGCCGAGCTCGACACGCTGCGCGCCGGCAATCCGGCCGCGCGCGTGCTGCCGCTGCTCGACGCGCTCGCC GCACGGCGTTCGACGCGCGTCGTGCTCGATTACCTGGCCGACACACGCGTACAAGTCGACGTCGCGATGCCGGATACGTT CACGGAGCGCGCGTGA
Upstream 100 bases:
>100_bases CGCGCGTGCGTGCCGTCCTCTCCAATTCGTTCGGCTTCGGCGGCACGAATTGCAGCCTGATCCTCGGCCGCGCCGACCAC GCACGCCGTTGAGGCCCGCC
Downstream 100 bases:
>100_bases TGACCGCGACGATCCCGCTCGCGCCGCCGCTCAACCACGCGTGGATCGCCTCGCACATTCCGCACGACGGCGCGATGTGC ATGCTCGATACGGTCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTLTAFIESIGLIGPGLTDWPHAADVLAGHAPYAPARTELPPPAGLPSAERRRTGPVVRVALAAGHEAVAASGRDAATLA TVFSASGGDGQNCHAICETLAGDDRQLSPTRFHNSVHNAPAGYWSIATRAMATSNVLCAHDGSFAAGLLESLCQVVVDRV PSLLIAYDTDYPEPLRAVRPIGDAFGVALVLAPEPSERALARIDVQLTDAPATTLAHAELDTLRAGNPAARVLPLLDALA ARRSTRVVLDYLADTRVQVDVAMPDTFTERA
Sequences:
>Translated_271_residues MTLTAFIESIGLIGPGLTDWPHAADVLAGHAPYAPARTELPPPAGLPSAERRRTGPVVRVALAAGHEAVAASGRDAATLA TVFSASGGDGQNCHAICETLAGDDRQLSPTRFHNSVHNAPAGYWSIATRAMATSNVLCAHDGSFAAGLLESLCQVVVDRV PSLLIAYDTDYPEPLRAVRPIGDAFGVALVLAPEPSERALARIDVQLTDAPATTLAHAELDTLRAGNPAARVLPLLDALA ARRSTRVVLDYLADTRVQVDVAMPDTFTERA >Mature_270_residues TLTAFIESIGLIGPGLTDWPHAADVLAGHAPYAPARTELPPPAGLPSAERRRTGPVVRVALAAGHEAVAASGRDAATLAT VFSASGGDGQNCHAICETLAGDDRQLSPTRFHNSVHNAPAGYWSIATRAMATSNVLCAHDGSFAAGLLESLCQVVVDRVP SLLIAYDTDYPEPLRAVRPIGDAFGVALVLAPEPSERALARIDVQLTDAPATTLAHAELDTLRAGNPAARVLPLLDALAA RRSTRVVLDYLADTRVQVDVAMPDTFTERA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28362; Mature: 28231
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTAFIESIGLIGPGLTDWPHAADVLAGHAPYAPARTELPPPAGLPSAERRRTGPVVRV CHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEE ALAAGHEAVAASGRDAATLATVFSASGGDGQNCHAICETLAGDDRQLSPTRFHNSVHNAP EECCCCHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCC AGYWSIATRAMATSNVLCAHDGSFAAGLLESLCQVVVDRVPSLLIAYDTDYPEPLRAVRP CCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHC IGDAFGVALVLAPEPSERALARIDVQLTDAPATTLAHAELDTLRAGNPAARVLPLLDALA CCCCCCEEEEECCCCCHHCEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH ARRSTRVVLDYLADTRVQVDVAMPDTFTERA HHCCHHHHHHHHHCCEEEEEEECCCHHCCCC >Mature Secondary Structure TLTAFIESIGLIGPGLTDWPHAADVLAGHAPYAPARTELPPPAGLPSAERRRTGPVVRV HHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEE ALAAGHEAVAASGRDAATLATVFSASGGDGQNCHAICETLAGDDRQLSPTRFHNSVHNAP EECCCCHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCC AGYWSIATRAMATSNVLCAHDGSFAAGLLESLCQVVVDRVPSLLIAYDTDYPEPLRAVRP CCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHC IGDAFGVALVLAPEPSERALARIDVQLTDAPATTLAHAELDTLRAGNPAARVLPLLDALA CCCCCCEEEEECCCCCHHCEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH ARRSTRVVLDYLADTRVQVDVAMPDTFTERA HHCCHHHHHHHHHCCEEEEEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA