| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067430
Identifier: 78067430
GI number: 78067430
Start: 3091292
End: 3092047
Strand: Reverse
Name: 78067430
Synonym: Bcep18194_A5961
Alternate gene names: NA
Gene position: 3092047-3091292 (Counterclockwise)
Preceding gene: 78067437
Following gene: 78067429
Centisome position: 83.7
GC content: 67.06
Gene sequence:
>756_bases ATGCTCGCTCGATTGTCCGCCACCGACCGCTTCGCGCTGATCCAGGGCGCGCGCGATTATTCCCCGACGCTGATGGCGAT TTTCTCGTGGGGGCTCGTCACCGGCATCGCGATGAGCAAGTCGGTGATGACACTCGGGCAGGCGAGCGCGATGTCGCTGC TGGTCTACGCGGGCTCGTCGCAGCTCGCGGTGCTGCCGCTCCTCGCGGCGAAGCTGCCGATCTGGACCATCCTGCTCACG GCCGCGATGGTCAACACGCGCTTCGTGATCTTCAGCGCCGGGCTTGCTCCCCATTTCTCCTACCTGCCGCTGTGGCGGCG CCTCGCGATCGGCTATTTCAACGGCGACGTAATCTACCTGCTGTTCCAGAAACAGGGCTTCGCGTATGGCCACGTGCCCG GCAAGGAGGCGTATTTCTGGGGGATGGCGCTCGCGAGCTGGCTGTCGTGGCAGGTGTCGTCGCTCGCCGGCATCCTGCTC GCGAGCTTCTTCCCCGCGAGCTGGGGGCTGGAACTGGCCGGCACGCTCGCGCTGATCCCGATCATGGTGTCGGCGGTCGC GAACCGTTCGACGCTCGCGGCCGTCGCGGTCGCCGGTGTCGTGTCGCTGATCGCGTTCGACCTGCCGTACCGGCTCGCGC TGCCGCTTGCGGTGCTCGCCGCGCTCGCGGCGGGCTGCACGGCCGATTTCTTCGTCGAGCGGGCCGACTGGCGGCGCATC CGCACCGAAACCGTGCACGAAAAGGAAATCGAATGA
Upstream 100 bases:
>100_bases GCCGGCGCTATAATCGCCCGGTACCGATTCCAATAACGACGGGTCGTACCGGCAGGAGGCGCCGGCGCCCCGACGAACCG CCCGCTGCGGCCCGCTTCCC
Downstream 100 bases:
>100_bases GCGCGACGGATATCTGGATCGTCATCATCGGGATGACGATCGTCACGGCCGTCACGCGCGCGCTGTTCCTGATCGGCGGC GAACGCACGGTGCTGCCCGA
Product: AzlC-like efflux pump
Products: NA
Alternate protein names: Branched-Chain Amino Acid Permease; Branched-Chain Amino Acid Transport Protein AzlC; AzlC-Like; AzlC-Like Protein; Inner Membrane Protein; Branched Chain Amino Acid Efflux Pump LivE; Inner Membrane Protein YgaZ; AzlC Family; AzlC Protein; Azlc Family Protein; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLARLSATDRFALIQGARDYSPTLMAIFSWGLVTGIAMSKSVMTLGQASAMSLLVYAGSSQLAVLPLLAAKLPIWTILLT AAMVNTRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAYGHVPGKEAYFWGMALASWLSWQVSSLAGILL ASFFPASWGLELAGTLALIPIMVSAVANRSTLAAVAVAGVVSLIAFDLPYRLALPLAVLAALAAGCTADFFVERADWRRI RTETVHEKEIE
Sequences:
>Translated_251_residues MLARLSATDRFALIQGARDYSPTLMAIFSWGLVTGIAMSKSVMTLGQASAMSLLVYAGSSQLAVLPLLAAKLPIWTILLT AAMVNTRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAYGHVPGKEAYFWGMALASWLSWQVSSLAGILL ASFFPASWGLELAGTLALIPIMVSAVANRSTLAAVAVAGVVSLIAFDLPYRLALPLAVLAALAAGCTADFFVERADWRRI RTETVHEKEIE >Mature_251_residues MLARLSATDRFALIQGARDYSPTLMAIFSWGLVTGIAMSKSVMTLGQASAMSLLVYAGSSQLAVLPLLAAKLPIWTILLT AAMVNTRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAYGHVPGKEAYFWGMALASWLSWQVSSLAGILL ASFFPASWGLELAGTLALIPIMVSAVANRSTLAAVAVAGVVSLIAFDLPYRLALPLAVLAALAAGCTADFFVERADWRRI RTETVHEKEIE
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27137; Mature: 27137
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARLSATDRFALIQGARDYSPTLMAIFSWGLVTGIAMSKSVMTLGQASAMSLLVYAGSS CCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCC QLAVLPLLAAKLPIWTILLTAAMVNTRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYL CHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHEECCCEEEE LFQKQGFAYGHVPGKEAYFWGMALASWLSWQVSSLAGILLASFFPASWGLELAGTLALIP EEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IMVSAVANRSTLAAVAVAGVVSLIAFDLPYRLALPLAVLAALAAGCTADFFVERADWRRI HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RTETVHEKEIE HHHHHHHHCCC >Mature Secondary Structure MLARLSATDRFALIQGARDYSPTLMAIFSWGLVTGIAMSKSVMTLGQASAMSLLVYAGSS CCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCC QLAVLPLLAAKLPIWTILLTAAMVNTRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYL CHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHEECCCEEEE LFQKQGFAYGHVPGKEAYFWGMALASWLSWQVSSLAGILLASFFPASWGLELAGTLALIP EEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IMVSAVANRSTLAAVAVAGVVSLIAFDLPYRLALPLAVLAALAAGCTADFFVERADWRRI HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RTETVHEKEIE HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA