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The map label for this gene is yfgC [C]

Identifier: 78067437

GI number: 78067437

Start: 3096850

End: 3098616

Strand: Reverse

Name: yfgC [C]

Synonym: Bcep18194_A5968

Alternate gene names: 78067437

Gene position: 3098616-3096850 (Counterclockwise)

Preceding gene: 78067440

Following gene: 78067430

Centisome position: 83.88

GC content: 71.19

Gene sequence:

>1767_bases
ATGACCCGAATATTCAGACCAAACGCCGCGATGCGCGCCCGGCGCGCGGGACGGCGTCGTTTTCATCCTGCCATGCGTGT
CAAACAGTTGCTTGCCGTGTCGCTGTCGGTGGCGCTCGCATTGCCGCCGAGCGGCCATGCGCAGAGTGCGTCCGCGCCGC
CGCTCGAATCGGCGGCCGGCGGCGCCCGGTCGATTTCCACGGTGCCGTCCGGCATCGCGGCCGGCGTGTTCGGCACGTAC
GGCGGGGCGGAGAGCCGGTTTTCGGACACCGGCGGCGCGTCGGCGCCGGCCGCGAGCCTGCGGGCGCCGCTTCGCTCGCT
CGAGCTGCCCGACCTGGGCGACGGTTCCGGCGGTTCGCTGACGCCTCAGGCCGAGCGCCGGCTCGGCGAGCGCGTAATGC
GCGAAGTGCGGCGCGATCCCGACTATCTCGACGACTGGCTCGTGCGCGACTACCTGAATGCGATGGCGGCGCGGCTCGCG
GCCGCGGCGGCCGCGCGCTTCATCGGCGGCTACACGCCGGACTTCGACCTGTTCCCGGTTCGCGATCCGCAGATCAACGC
ATTCTCGATGCCGGGCGGCTTCATCGGGATCAACAGTGGCCTCGTCGTCACGACACAGACGGAGTCGGAACTCGCATCGG
TGGTCGGCCACGAGATGGGGCACGTGCTGCAGCGGCACATCGCGCGGATGATCGGTGCGAACGAGAAAACCGGCTATACG
GCGCTCGCGACGATGCTGCTCGGCGTGCTGGCCGGCGTGCTCGCGAGAAGCGGCGACCTCGGGAGTGCGATCGCGGTGGG
CGGGCAGGCATATGCGGTGGACAACCAGCTGCGCTTTTCGCGATCGGCCGAGCGCGAGGCCGATCGTGTCGGTTTCCAGT
TGCTCGCGGGCGCGGGCTATGACCCGTACGGGATGCCGGGCTTCTTCGAGCGGCTCGACCGCGCGTCGATGGGCGATGCG
GGCGTGCCGGCGTACGCGCGCACGCACCCGCTGACCGGCGAGCGGATCGCCGACATGGAGGATCGCGCGCGCCGCGCGCC
GTACCGGCAGCCGCGCCAGTCGCCCGAGTACGGTTTCGTGCGCGCGCGGCTGCGCGTCCTGCAGAACCGCGCGCCGACCG
ACATCGCGGCCGAGGCGCGGCGAATGCAGTTCGAGATCGACGATCGCACCGCGCCGAACGTCGCGGCGAACTGGTACGGC
ATTGCGCTCGCGGATGCGCTGCTCGGCGAGTATGACGCCGCCGGCAAGGCACTTGCGTCGGCGCGCAGCGCGTTCGACGC
GCGCGAGCGGCGCGAGGACGATCCGGCGACGAGTTCGCCGAGCCTCGACGTGCTGGCCGCCGACATCGCGCGCCGCGCGG
GTCGGGCCGACGACGCGGTGCGACTTGCGGCGCTCGCGCAGCGCCGCTGGCCGGCATCGCACGCCGCGATCGTCACGCAT
CTTCAGGCGCTGATCGCGGCGCGCCGTTTCGGTGAAGCGCAGGCGCAGGCCCGCGCGCAGGCGAAGGCCGACCCCGAACA
GCCGGACTGGTGGGACTATCTCGCGAAGGCGAGCGACGGCAAGGGCGACCTGCTGGCGCGGCGCCGCGCGCTCGCGGAGA
AGCTTGCGCTCGACGGCGCGTGGCCGTCGGCGATTCGCCAACTGAAGGAAGCGCGCGATGCGAAAGACGTGTCGTTCTAC
GAGCAGTCGATGATCGGTGCTCGGCTGCTGGAATTCGAAGCGCGCTACAAGGAAGAGCGCGAAGACGAGAAGAACGGCCG
CGGGTAG

Upstream 100 bases:

>100_bases
CAACGTTTCAACGGGCGCCTATCATAGCAGTGGCATTCGCGGCGCCGGGTATGCAGATGGCGCGCATCCCGCACGGGACA
GTCGCGATGTCGCCGGTACA

Downstream 100 bases:

>100_bases
CGGCCGGCGCGCGGCAAGCGCGGGCGAGACCGCTGCGGGTCAGTTGCCGCCGTCAGCCGTGTCGCGGGCCTGTTGCGCCG
GGCTTGCGACATAGCCGAAT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MTRIFRPNAAMRARRAGRRRFHPAMRVKQLLAVSLSVALALPPSGHAQSASAPPLESAAGGARSISTVPSGIAAGVFGTY
GGAESRFSDTGGASAPAASLRAPLRSLELPDLGDGSGGSLTPQAERRLGERVMREVRRDPDYLDDWLVRDYLNAMAARLA
AAAAARFIGGYTPDFDLFPVRDPQINAFSMPGGFIGINSGLVVTTQTESELASVVGHEMGHVLQRHIARMIGANEKTGYT
ALATMLLGVLAGVLARSGDLGSAIAVGGQAYAVDNQLRFSRSAEREADRVGFQLLAGAGYDPYGMPGFFERLDRASMGDA
GVPAYARTHPLTGERIADMEDRARRAPYRQPRQSPEYGFVRARLRVLQNRAPTDIAAEARRMQFEIDDRTAPNVAANWYG
IALADALLGEYDAAGKALASARSAFDARERREDDPATSSPSLDVLAADIARRAGRADDAVRLAALAQRRWPASHAAIVTH
LQALIAARRFGEAQAQARAQAKADPEQPDWWDYLAKASDGKGDLLARRRALAEKLALDGAWPSAIRQLKEARDAKDVSFY
EQSMIGARLLEFEARYKEEREDEKNGRG

Sequences:

>Translated_588_residues
MTRIFRPNAAMRARRAGRRRFHPAMRVKQLLAVSLSVALALPPSGHAQSASAPPLESAAGGARSISTVPSGIAAGVFGTY
GGAESRFSDTGGASAPAASLRAPLRSLELPDLGDGSGGSLTPQAERRLGERVMREVRRDPDYLDDWLVRDYLNAMAARLA
AAAAARFIGGYTPDFDLFPVRDPQINAFSMPGGFIGINSGLVVTTQTESELASVVGHEMGHVLQRHIARMIGANEKTGYT
ALATMLLGVLAGVLARSGDLGSAIAVGGQAYAVDNQLRFSRSAEREADRVGFQLLAGAGYDPYGMPGFFERLDRASMGDA
GVPAYARTHPLTGERIADMEDRARRAPYRQPRQSPEYGFVRARLRVLQNRAPTDIAAEARRMQFEIDDRTAPNVAANWYG
IALADALLGEYDAAGKALASARSAFDARERREDDPATSSPSLDVLAADIARRAGRADDAVRLAALAQRRWPASHAAIVTH
LQALIAARRFGEAQAQARAQAKADPEQPDWWDYLAKASDGKGDLLARRRALAEKLALDGAWPSAIRQLKEARDAKDVSFY
EQSMIGARLLEFEARYKEEREDEKNGRG
>Mature_587_residues
TRIFRPNAAMRARRAGRRRFHPAMRVKQLLAVSLSVALALPPSGHAQSASAPPLESAAGGARSISTVPSGIAAGVFGTYG
GAESRFSDTGGASAPAASLRAPLRSLELPDLGDGSGGSLTPQAERRLGERVMREVRRDPDYLDDWLVRDYLNAMAARLAA
AAAARFIGGYTPDFDLFPVRDPQINAFSMPGGFIGINSGLVVTTQTESELASVVGHEMGHVLQRHIARMIGANEKTGYTA
LATMLLGVLAGVLARSGDLGSAIAVGGQAYAVDNQLRFSRSAEREADRVGFQLLAGAGYDPYGMPGFFERLDRASMGDAG
VPAYARTHPLTGERIADMEDRARRAPYRQPRQSPEYGFVRARLRVLQNRAPTDIAAEARRMQFEIDDRTAPNVAANWYGI
ALADALLGEYDAAGKALASARSAFDARERREDDPATSSPSLDVLAADIARRAGRADDAVRLAALAQRRWPASHAAIVTHL
QALIAARRFGEAQAQARAQAKADPEQPDWWDYLAKASDGKGDLLARRRALAEKLALDGAWPSAIRQLKEARDAKDVSFYE
QSMIGARLLEFEARYKEEREDEKNGRG

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=317, Percent_Identity=30.9148264984227, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI87082185, Length=184, Percent_Identity=30.9782608695652, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 63436; Mature: 63305

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIFRPNAAMRARRAGRRRFHPAMRVKQLLAVSLSVALALPPSGHAQSASAPPLESAAG
CCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHCC
GARSISTVPSGIAAGVFGTYGGAESRFSDTGGASAPAASLRAPLRSLELPDLGDGSGGSL
CCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
TPQAERRLGERVMREVRRDPDYLDDWLVRDYLNAMAARLAAAAAARFIGGYTPDFDLFPV
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RDPQINAFSMPGGFIGINSGLVVTTQTESELASVVGHEMGHVLQRHIARMIGANEKTGYT
CCCCCCEEECCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALATMLLGVLAGVLARSGDLGSAIAVGGQAYAVDNQLRFSRSAEREADRVGFQLLAGAGY
HHHHHHHHHHHHHHHCCCCCCCHHEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
DPYGMPGFFERLDRASMGDAGVPAYARTHPLTGERIADMEDRARRAPYRQPRQSPEYGFV
CCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHCHHHHHHCCCCCCCCCCCCHHHH
RARLRVLQNRAPTDIAAEARRMQFEIDDRTAPNVAANWYGIALADALLGEYDAAGKALAS
HHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSAFDARERREDDPATSSPSLDVLAADIARRAGRADDAVRLAALAQRRWPASHAAIVTH
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHH
LQALIAARRFGEAQAQARAQAKADPEQPDWWDYLAKASDGKGDLLARRRALAEKLALDGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
WPSAIRQLKEARDAKDVSFYEQSMIGARLLEFEARYKEEREDEKNGRG
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRIFRPNAAMRARRAGRRRFHPAMRVKQLLAVSLSVALALPPSGHAQSASAPPLESAAG
CCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHCC
GARSISTVPSGIAAGVFGTYGGAESRFSDTGGASAPAASLRAPLRSLELPDLGDGSGGSL
CCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
TPQAERRLGERVMREVRRDPDYLDDWLVRDYLNAMAARLAAAAAARFIGGYTPDFDLFPV
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RDPQINAFSMPGGFIGINSGLVVTTQTESELASVVGHEMGHVLQRHIARMIGANEKTGYT
CCCCCCEEECCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALATMLLGVLAGVLARSGDLGSAIAVGGQAYAVDNQLRFSRSAEREADRVGFQLLAGAGY
HHHHHHHHHHHHHHHCCCCCCCHHEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
DPYGMPGFFERLDRASMGDAGVPAYARTHPLTGERIADMEDRARRAPYRQPRQSPEYGFV
CCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHCHHHHHHCCCCCCCCCCCCHHHH
RARLRVLQNRAPTDIAAEARRMQFEIDDRTAPNVAANWYGIALADALLGEYDAAGKALAS
HHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSAFDARERREDDPATSSPSLDVLAADIARRAGRADDAVRLAALAQRRWPASHAAIVTH
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHH
LQALIAARRFGEAQAQARAQAKADPEQPDWWDYLAKASDGKGDLLARRRALAEKLALDGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
WPSAIRQLKEARDAKDVSFYEQSMIGARLLEFEARYKEEREDEKNGRG
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]