| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yjeS [H]
Identifier: 78067362
GI number: 78067362
Start: 3013046
End: 3014194
Strand: Reverse
Name: yjeS [H]
Synonym: Bcep18194_A5893
Alternate gene names: 78067362
Gene position: 3014194-3013046 (Counterclockwise)
Preceding gene: 78067365
Following gene: 78067361
Centisome position: 81.59
GC content: 69.63
Gene sequence:
>1149_bases TTGACTGCGCTCGCCGCGCGCATCAGGGCGTGGGGGCGCGAATTGGGTTTCGGGGCGATCGGCATCAGCGATACCGATCT CTCGGATGCCGAAGCAGGCCTCGCCGCCTGGCTGGAAGCCGGATACCACGGCGAAATGGATTATATGGCGAAACATGGGA TGAAACGCGCGCGTCCGGCCGAACTTGTGGCCGGTACGCGACGCGTGATCTCCGCGCGACTCGCCTATCTGCCGGCCGAA ACGCTGGCCGCCGACGCACCTGAAAGCGAGCCAGGCACGCTCGCGCTGCACGACTGGCGTGCGCGCGAACGGGCCCGGCT CGACGATCCGCAGGCGGCCGTCGTGTCGATCTACGCACGCGGCCGCGACTATCACAAGGTGCTGCGCAACCGCCTGCAGA CACTCGCGGAGCGCATCGAGCAGGAGATCGGCGCGTTCGGCTACCGCGTGTTCACCGATTCGGCGCCCGTGCTCGAGGTC GAGCTCGCGCAGAAGGCCGGCGTCGGCTGGCGCGGCAAGCACACGCTGCTGCTGCAGCGCGATGCGGGCTCGCTGTTCTT CCTCGGCGAAATCTACGTCGACGTCCCGCTGCCGACCGACGCGCACACGTCCCCCGACACCGCGCCCGAAACGCCCGGCG CGCACTGCGGCAGCTGCACGCGCTGCATCGGCGCCTGCCCGACCGGCGCGATCGTCGAGCCGTACCGCGTCGACGCGCGC CGCTGCATCTCGTACCTGACGATCGAACTGAAAGGCAGCATCCCCGAGCCGCTGCGGCCGATGATCGGCAATCGCGTGTA CGGCTGCGACGACTGCCAGCTCGTGTGCCCGTGGAACAAGTTCGCGCAGGCCGCGCCCGTCGCCGATTTCGACGTACGGC ACGGCCTCGACCGCGCGACGCTCGTCGAGCTGTTTGCGTGGGATGCGGACACGTTCGATACGCGCATGCAGGGCAGTGCG ATCCGACGCATCGGCTACGAAAGCTGGCTGCGCAATCTCGCGGTCGGGCTCGGCAATGCGCTGCGCGCGGACGCGGGCCG GCTCACGCCGCAGGCGCGCGAGGCGATCGTCGCTGCGTTGCGCGCGCGGGCCGACGATCCGTCGCCGGTCGTGCGCGAGC ATGTCGAATGGGCGCTGCGTGCCGTGTGA
Upstream 100 bases:
>100_bases GTAAAATAGTGCGATGAACCGATTACCGGAACTCGCCGCATCCGACAGGCCTTCGACTTGTGCCGAAGGCGCGGCACCGT GCGCGCTCGACGATGCGGCG
Downstream 100 bases:
>100_bases AGGCGGCGTAAAGTGTCGTCGGCGCGCGGTGGTGCCGCGCGCATCCATCGGTCAGGAGAGGGCCATGTTCAATGCAGTCA TCGACGCGCCGTTCGGCAAA
Product: 4Fe-4S cluster binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTALAARIRAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAKHGMKRARPAELVAGTRRVISARLAYLPAE TLAADAPESEPGTLALHDWRARERARLDDPQAAVVSIYARGRDYHKVLRNRLQTLAERIEQEIGAFGYRVFTDSAPVLEV ELAQKAGVGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAHTSPDTAPETPGAHCGSCTRCIGACPTGAIVEPYRVDAR RCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRATLVELFAWDADTFDTRMQGSA IRRIGYESWLRNLAVGLGNALRADAGRLTPQAREAIVAALRARADDPSPVVREHVEWALRAV
Sequences:
>Translated_382_residues MTALAARIRAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAKHGMKRARPAELVAGTRRVISARLAYLPAE TLAADAPESEPGTLALHDWRARERARLDDPQAAVVSIYARGRDYHKVLRNRLQTLAERIEQEIGAFGYRVFTDSAPVLEV ELAQKAGVGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAHTSPDTAPETPGAHCGSCTRCIGACPTGAIVEPYRVDAR RCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRATLVELFAWDADTFDTRMQGSA IRRIGYESWLRNLAVGLGNALRADAGRLTPQAREAIVAALRARADDPSPVVREHVEWALRAV >Mature_381_residues TALAARIRAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAKHGMKRARPAELVAGTRRVISARLAYLPAET LAADAPESEPGTLALHDWRARERARLDDPQAAVVSIYARGRDYHKVLRNRLQTLAERIEQEIGAFGYRVFTDSAPVLEVE LAQKAGVGWRGKHTLLLQRDAGSLFFLGEIYVDVPLPTDAHTSPDTAPETPGAHCGSCTRCIGACPTGAIVEPYRVDARR CISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRATLVELFAWDADTFDTRMQGSAI RRIGYESWLRNLAVGLGNALRADAGRLTPQAREAIVAALRARADDPSPVVREHVEWALRAV
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=379, Percent_Identity=52.2427440633245, Blast_Score=395, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 41838; Mature: 41707
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALAARIRAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAKHGMKRARPA CCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHH ELVAGTRRVISARLAYLPAETLAADAPESEPGTLALHDWRARERARLDDPQAAVVSIYAR HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECHHHHHHCCCCCCHHHHHHHHHC GRDYHKVLRNRLQTLAERIEQEIGAFGYRVFTDSAPVLEVELAQKAGVGWRGKHTLLLQR CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEHHHCCCCCCCCEEEEEEE DAGSLFFLGEIYVDVPLPTDAHTSPDTAPETPGAHCGSCTRCIGACPTGAIVEPYRVDAR CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHH RCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRAT HHHHHEEEEECCCCCCCHHHHHCCCCCCCCCCEEECCCHHHHHHCCCCCCHHHHCCCHHH LVELFAWDADTFDTRMQGSAIRRIGYESWLRNLAVGLGNALRADAGRLTPQAREAIVAAL HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHH RARADDPSPVVREHVEWALRAV HHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TALAARIRAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAKHGMKRARPA CHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHH ELVAGTRRVISARLAYLPAETLAADAPESEPGTLALHDWRARERARLDDPQAAVVSIYAR HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECHHHHHHCCCCCCHHHHHHHHHC GRDYHKVLRNRLQTLAERIEQEIGAFGYRVFTDSAPVLEVELAQKAGVGWRGKHTLLLQR CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEHHHCCCCCCCCEEEEEEE DAGSLFFLGEIYVDVPLPTDAHTSPDTAPETPGAHCGSCTRCIGACPTGAIVEPYRVDAR CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHH RCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHGLDRAT HHHHHEEEEECCCCCCCHHHHHCCCCCCCCCCEEECCCHHHHHHCCCCCCHHHHCCCHHH LVELFAWDADTFDTRMQGSAIRRIGYESWLRNLAVGLGNALRADAGRLTPQAREAIVAAL HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHH RARADDPSPVVREHVEWALRAV HHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]