| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067342
Identifier: 78067342
GI number: 78067342
Start: 2993730
End: 2994941
Strand: Direct
Name: 78067342
Synonym: Bcep18194_A5873
Alternate gene names: NA
Gene position: 2993730-2994941 (Clockwise)
Preceding gene: 78067341
Following gene: 78067345
Centisome position: 81.04
GC content: 73.6
Gene sequence:
>1212_bases TTGAGCACGTCGACCGCCTCCGCTCCCTCCCGCCATCCGTGGCCGGTGTTCGTCGCGTTCCTGCGGCTCGGCCTCACGTC GTTCGGCGGCCCGGTCGCGCATCTCGGCTACTTCCGCACCGAATTCGTCACGCGGCGCGGCTGGCTCACCGAGCGCGCGT ACGCGGATCTCGTCGGGCTGTGCCAGTTCCTGCCGGGGCCCGCGAGCAGCCAGGTCGGGATGGCAATCGGCCTCGCGCGC GCCGGCTACGCGGGCATGTTCGCCGCGTGGCTCGGCTTCACGCTGCCGTCCGCGTTGCTGATGATGCTGTTCGCGCTCGG CGTGCATGCGACGGGCGCGCCAATCGAAGCCGGTGCGCTGCACGGGCTGCGCATCGTGTCGGTCGCCGTGATCGCGCAAG CCGTGTGGGGCATGGCACGCACGCTGTGCCCGGATGCACGCCGCGCCACGCTGATGGCCGCGGCCGCCTGCGTCGCGCTG CTCGCGCCGGCCGCGTGGACCCAGGTTGCGGTGATCGTCGCGGCCGGGTTGGCCGGCCTCGTGCTGCTGCCGCAGCCGGC GCGCGGCGCGCACGATCCGTTGCCGCTGCACGTGTCGCCCCGCGCAGGCATGCTGTGGCTCGCGCTGTTCGCGGCGCTCC TCGTGGTGCTCCCGTTCGCGGCCCGCGCGCTGCGCTCCGATACGCTGGCCGTCGTCGATGCGTTCTTCCGCACGGGTGCG CTCGTATTCGGCGGCGGGCACGTCGTGCTGCCACTGCTGCAGGCGGCTGTCGTCGCGCCCGGCTGGGTCGGCGATGCGGC GTTCCTGGCCGGATATGGCGTCACGCAGGCCGTGCCGGGGCCGCTGTTCACGTTTTCGGCGTTCCTTGGCGCATCGCTGC GCAACGCGCCGAACGGCTGGCTCGGTGGCACGATCGCGCTGGTGTCGATCTTCGCGCCGTCGTTCCTGCTGGTGGCCGGC ACCGCGCCGTTCTGGGAACGGCTGCGCCGCAGCACACGGATGCAGGCCGCGCTCGCGGGCGTGAACGCGGCCGTCGTCGG GCTGCTGGTCGCGGCGCTCTATCACCCGGTCTGGACCGACACGATCGTGGCGCCGCGCGATCTGGCCGCCGCGCTCGTCG CATTCGTCGCGCTGGTGTTCTGGCGCGTGCCGCCGTGGGCCGTCGTGATCGCGAGCGCCGCGCTCGGCTGGGGGCTCGGC GTCGCGGCCTGA
Upstream 100 bases:
>100_bases ACAGCCTGCGCTGAGCCCCGGCACCGCCGTCGCGCGGCCTCCCCGCCGTCACCGCGTTGCGCTATCGTGGCGGCTCGTCC GTTCATCCGCCCGCACCGCC
Downstream 100 bases:
>100_bases CCGGACACGCAGGGCACGTTCCACCTCGACAGAAAACAAAAAAGCCCTCGTTTCGAGGGCTCTTTTTGCGGGGTGCCGCG CGCCGTAGCGGCGCGCAGGC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSTSTASAPSRHPWPVFVAFLRLGLTSFGGPVAHLGYFRTEFVTRRGWLTERAYADLVGLCQFLPGPASSQVGMAIGLAR AGYAGMFAAWLGFTLPSALLMMLFALGVHATGAPIEAGALHGLRIVSVAVIAQAVWGMARTLCPDARRATLMAAAACVAL LAPAAWTQVAVIVAAGLAGLVLLPQPARGAHDPLPLHVSPRAGMLWLALFAALLVVLPFAARALRSDTLAVVDAFFRTGA LVFGGGHVVLPLLQAAVVAPGWVGDAAFLAGYGVTQAVPGPLFTFSAFLGASLRNAPNGWLGGTIALVSIFAPSFLLVAG TAPFWERLRRSTRMQAALAGVNAAVVGLLVAALYHPVWTDTIVAPRDLAAALVAFVALVFWRVPPWAVVIASAALGWGLG VAA
Sequences:
>Translated_403_residues MSTSTASAPSRHPWPVFVAFLRLGLTSFGGPVAHLGYFRTEFVTRRGWLTERAYADLVGLCQFLPGPASSQVGMAIGLAR AGYAGMFAAWLGFTLPSALLMMLFALGVHATGAPIEAGALHGLRIVSVAVIAQAVWGMARTLCPDARRATLMAAAACVAL LAPAAWTQVAVIVAAGLAGLVLLPQPARGAHDPLPLHVSPRAGMLWLALFAALLVVLPFAARALRSDTLAVVDAFFRTGA LVFGGGHVVLPLLQAAVVAPGWVGDAAFLAGYGVTQAVPGPLFTFSAFLGASLRNAPNGWLGGTIALVSIFAPSFLLVAG TAPFWERLRRSTRMQAALAGVNAAVVGLLVAALYHPVWTDTIVAPRDLAAALVAFVALVFWRVPPWAVVIASAALGWGLG VAA >Mature_402_residues STSTASAPSRHPWPVFVAFLRLGLTSFGGPVAHLGYFRTEFVTRRGWLTERAYADLVGLCQFLPGPASSQVGMAIGLARA GYAGMFAAWLGFTLPSALLMMLFALGVHATGAPIEAGALHGLRIVSVAVIAQAVWGMARTLCPDARRATLMAAAACVALL APAAWTQVAVIVAAGLAGLVLLPQPARGAHDPLPLHVSPRAGMLWLALFAALLVVLPFAARALRSDTLAVVDAFFRTGAL VFGGGHVVLPLLQAAVVAPGWVGDAAFLAGYGVTQAVPGPLFTFSAFLGASLRNAPNGWLGGTIALVSIFAPSFLLVAGT APFWERLRRSTRMQAALAGVNAAVVGLLVAALYHPVWTDTIVAPRDLAAALVAFVALVFWRVPPWAVVIASAALGWGLGV AA
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 41690; Mature: 41558
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSTASAPSRHPWPVFVAFLRLGLTSFGGPVAHLGYFRTEFVTRRGWLTERAYADLVGL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH CQFLPGPASSQVGMAIGLARAGYAGMFAAWLGFTLPSALLMMLFALGVHATGAPIEAGAL HHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH HGLRIVSVAVIAQAVWGMARTLCPDARRATLMAAAACVALLAPAAWTQVAVIVAAGLAGL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VLLPQPARGAHDPLPLHVSPRAGMLWLALFAALLVVLPFAARALRSDTLAVVDAFFRTGA EECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LVFGGGHVVLPLLQAAVVAPGWVGDAAFLAGYGVTQAVPGPLFTFSAFLGASLRNAPNGW EEEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCC LGGTIALVSIFAPSFLLVAGTAPFWERLRRSTRMQAALAGVNAAVVGLLVAALYHPVWTD CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TIVAPRDLAAALVAFVALVFWRVPPWAVVIASAALGWGLGVAA CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STSTASAPSRHPWPVFVAFLRLGLTSFGGPVAHLGYFRTEFVTRRGWLTERAYADLVGL CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH CQFLPGPASSQVGMAIGLARAGYAGMFAAWLGFTLPSALLMMLFALGVHATGAPIEAGAL HHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH HGLRIVSVAVIAQAVWGMARTLCPDARRATLMAAAACVALLAPAAWTQVAVIVAAGLAGL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VLLPQPARGAHDPLPLHVSPRAGMLWLALFAALLVVLPFAARALRSDTLAVVDAFFRTGA EECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LVFGGGHVVLPLLQAAVVAPGWVGDAAFLAGYGVTQAVPGPLFTFSAFLGASLRNAPNGW EEEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCC LGGTIALVSIFAPSFLLVAGTAPFWERLRRSTRMQAALAGVNAAVVGLLVAALYHPVWTD CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TIVAPRDLAAALVAFVALVFWRVPPWAVVIASAALGWGLGVAA CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]