| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ascD [H]
Identifier: 78067291
GI number: 78067291
Start: 2936646
End: 2937677
Strand: Direct
Name: ascD [H]
Synonym: Bcep18194_A5822
Alternate gene names: 78067291
Gene position: 2936646-2937677 (Clockwise)
Preceding gene: 78067289
Following gene: 78067292
Centisome position: 79.5
GC content: 65.7
Gene sequence:
>1032_bases ATGGCATTCAACGTCACTCTCAAGCAAAGCGGCCGGCAATTCCAGGTCGAGTCGGACGAAACCGTGCTGGCGGCTGCGCT GCGCCAGAACGTCCATCTGCCGTACGGCTGCAAGAACGGCGCGTGCGGCTCCTGCAAGGGCCAGATCGTGTCGGGCCAGA TCGAACAGGGCCCGCACGCCGCGTCGGCACTGTCCAACGACGAACGCACGCGCGGCCTCGCGCTGCTGTGCTGCTCGAAG GCGCAGTGCGATCTCGAAATCGACGTGCGTGAAATCGCCGGCGTCGACGGCGTGCAGGTCAAGAAGCTGCCGTGCCGGAT CGCCGCACTCGAGCGCAAGGCCGACGACGTGATGGTCGTGAAGCTCCAGTTGCCCGCCAACGAACGCCTGCAGTATCTCG CGGGCCAGTACGTCGAGTTCATCCTGAAGGACGGCTCGCGCCGCAGCTACTCGATGGCGAACGCGCCGCACGAGGAAGGC CCGGTTGAGCTGCACATCCGCCACATGCCGGGCGGCAAGTTCACCGACCACGTGTTCGGTGCGATGAAGGAGCGCGACAT CCTGCGCTTCGAAGGCCCGCTCGGCACATTCTTCCTGCGTGAAGATTCCGACAAGCCGATCGTGCTGCTCGCATCGGGCA CGGGCTTCGCGCCGATCAAGGCGATCATCGAGCACGTGAAGCACACGGGCATCACGCGCCCGATGACGCTCTACTGGGGC GCGCGCCGCAAGAAGGACATCTATCTCGGCGAGCTCGCCGAACAATGGGCGCGCGAGATCCCGAACTTCAAGTACGTGCC GGTGCTCTCCGAGCCGGACGCCGGCGACCAGTGGACGGGCCGCACCGGTTTCGTCCATCGTGCGGTGATCGAGGACCTGC CCGATCTGTCGGGCCACCAGGTGTATGCATGCGGCGCGCCGGTGATGGTCGAATCCGCACAGCGCGACTTCACGCAGCAC CACGCACTGCCCGCCGACGAGTTCTACGCGGACTCGTTCACGAGCGCCGCCGATCTCGCGCATCCGGTCTAA
Upstream 100 bases:
>100_bases GCGAAATCAGTAGCCACCGCTGCGCGACGCGCAACGGGTTTGCATTGTAGCTGCCGTGCTCGACATGCACGGTCCCCACA TTTTGTTCTAGTTTGGTTCT
Downstream 100 bases:
>100_bases CGCCTGCGCACCCGCGTACCGCACTGCGCCCCGCGATGTCACATCCGTGGCATCGCGGCGGTTTACAGTGAGGCGCGGGA TGCCTTATGCTTGCGCACAT
Product: CDP-6-deoxy-delta-3,4-glucoseen reductase
Products: NAD(P); FMNH2; 2-octaprenyl-6-hydroxyphenol [C]
Alternate protein names: CDP-6-deoxy-delta-3,4-glucoseen reductase; E3 [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MAFNVTLKQSGRQFQVESDETVLAAALRQNVHLPYGCKNGACGSCKGQIVSGQIEQGPHAASALSNDERTRGLALLCCSK AQCDLEIDVREIAGVDGVQVKKLPCRIAALERKADDVMVVKLQLPANERLQYLAGQYVEFILKDGSRRSYSMANAPHEEG PVELHIRHMPGGKFTDHVFGAMKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWG ARRKKDIYLGELAEQWAREIPNFKYVPVLSEPDAGDQWTGRTGFVHRAVIEDLPDLSGHQVYACGAPVMVESAQRDFTQH HALPADEFYADSFTSAADLAHPV
Sequences:
>Translated_343_residues MAFNVTLKQSGRQFQVESDETVLAAALRQNVHLPYGCKNGACGSCKGQIVSGQIEQGPHAASALSNDERTRGLALLCCSK AQCDLEIDVREIAGVDGVQVKKLPCRIAALERKADDVMVVKLQLPANERLQYLAGQYVEFILKDGSRRSYSMANAPHEEG PVELHIRHMPGGKFTDHVFGAMKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWG ARRKKDIYLGELAEQWAREIPNFKYVPVLSEPDAGDQWTGRTGFVHRAVIEDLPDLSGHQVYACGAPVMVESAQRDFTQH HALPADEFYADSFTSAADLAHPV >Mature_342_residues AFNVTLKQSGRQFQVESDETVLAAALRQNVHLPYGCKNGACGSCKGQIVSGQIEQGPHAASALSNDERTRGLALLCCSKA QCDLEIDVREIAGVDGVQVKKLPCRIAALERKADDVMVVKLQLPANERLQYLAGQYVEFILKDGSRRSYSMANAPHEEGP VELHIRHMPGGKFTDHVFGAMKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWGA RRKKDIYLGELAEQWAREIPNFKYVPVLSEPDAGDQWTGRTGFVHRAVIEDLPDLSGHQVYACGAPVMVESAQRDFTQHH ALPADEFYADSFTSAADLAHPV
Specific function: Participates in the conversion of CDP-6-deoxy-D-glycero- L-threo-4-hexulose to 3,6-dideoxy-D-glycero-D-glycero-4-hexulose together with CDP-6-deoxy-D-glycero-L-threo-4-hexulose-3-dehydrase (E1) in two consecutive steps. The detailed mechanism of E3 is not
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI2367314, Length=235, Percent_Identity=30.2127659574468, Blast_Score=121, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6322146, Length=174, Percent_Identity=31.0344827586207, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322699, Length=216, Percent_Identity=24.0740740740741, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6323552, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.5.1.29 [C]
Molecular weight: Translated: 37838; Mature: 37706
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNVTLKQSGRQFQVESDETVLAAALRQNVHLPYGCKNGACGSCKGQIVSGQIEQGPHA CEEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCH ASALSNDERTRGLALLCCSKAQCDLEIDVREIAGVDGVQVKKLPCRIAALERKADDVMVV HHHCCCCHHHCCEEEEEECCCCCCEEEEHHHHCCCCCCEEECCCHHHHHHHCCCCCEEEE KLQLPANERLQYLAGQYVEFILKDGSRRSYSMANAPHEEGPVELHIRHMPGGKFTDHVFG EEECCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCCCHHHHHHH AMKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWG HHHCCCEEEEECCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEC ARRKKDIYLGELAEQWAREIPNFKYVPVLSEPDAGDQWTGRTGFVHRAVIEDLPDLSGHQ CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE VYACGAPVMVESAQRDFTQHHALPADEFYADSFTSAADLAHPV EEECCCCCEEHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure AFNVTLKQSGRQFQVESDETVLAAALRQNVHLPYGCKNGACGSCKGQIVSGQIEQGPHA EEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCH ASALSNDERTRGLALLCCSKAQCDLEIDVREIAGVDGVQVKKLPCRIAALERKADDVMVV HHHCCCCHHHCCEEEEEECCCCCCEEEEHHHHCCCCCCEEECCCHHHHHHHCCCCCEEEE KLQLPANERLQYLAGQYVEFILKDGSRRSYSMANAPHEEGPVELHIRHMPGGKFTDHVFG EEECCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCCCHHHHHHH AMKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWG HHHCCCEEEEECCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEC ARRKKDIYLGELAEQWAREIPNFKYVPVLSEPDAGDQWTGRTGFVHRAVIEDLPDLSGHQ CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE VYACGAPVMVESAQRDFTQHHALPADEFYADSFTSAADLAHPV EEECCCCCEEHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD(P)H2; FMN [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H2; FMN; 2 2-octaprenylphenol; O2 [C]
Specific reaction: NAD(P)H2 + FMN = NAD(P) + FMNH2 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10931327; 11586360; 12142430 [H]