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The map label for this gene is yafE [H]

Identifier: 78067223

GI number: 78067223

Start: 2863671

End: 2864423

Strand: Reverse

Name: yafE [H]

Synonym: Bcep18194_A5754

Alternate gene names: 78067223

Gene position: 2864423-2863671 (Counterclockwise)

Preceding gene: 78067225

Following gene: 161702955

Centisome position: 77.54

GC content: 70.78

Gene sequence:

>753_bases
ATGAAACACCACGATCAGGTCGCCGACGCATTCGGCACGACGGCCGCCGCCTATCTGACGAGCACGGTCCACGCGACGGG
CGCCGATCTGCAGACGCTCGCCGACGCAGTGCGCGCGACGCCCGACGCCGCGGTGCTCGATCTCGGCTGCGGCGCCGGCC
ATGCGAGCTTCGCGGTCGCGCCGCACGTGCGCGACGTGGTCGCCTACGATCTCGCCGCGCAGATGCTCGCGACCGTCGAC
GCGGCCGCGCGCGAGCGCGGGCTCGCGAACATCCGCACGCAGCAGGGCCCGGCCGAGCAACTGCCGTTCGAGACGGCGAC
GTTCGACTGGGTCGTGAGCCGGATGAGCGCGCACCACTGGCACGACATGCGCGCGGCGCTCGCCGAGGTGCGCCGCGTGC
TGAAACCGGGTGGCCGTGTGCTGATGATCGACATCGCCGGCAACGAGCATCCGCTTCTCGATACGTACCTGCAGGCCGCG
GAAGTGCTGCGCGACGCGTCGCACGTGCGCGATTACCGGGCGGACGAATGGCTCGCGATGTTCCGCGACGCCGGCTTCGA
CGCGCACGTGCACAGCCGCTGGCGGCTGCCGATCGATTTCGATACGTGGGTTGCGCGCATCCGCACGCCGGCCGACAGCG
TCACCGGCATTCGCGCGCTGTGGGCGCATGCGCCGGACGAGGTGCGCGGCTACTACGCGGTGCAGCCCGATGGCTCGTTC
GAGCACGACGCACTGCTGATCGATGCGCACTGA

Upstream 100 bases:

>100_bases
GCGCTGGCAGGGCAGCGAGCGTCCCACAAAACGCGTTGCATGGGGCCGGAGCAGGCGCTGATGCGTCTGTCGCACCGGCA
ACGGTACAAAGGAGCGAACG

Downstream 100 bases:

>100_bases
GCGCGAGGTGTGCCGCCGCGGTTTCGCCCGCGCATGAAAAAAGCCGCGATACGCACCATTGCGTATCGCGGCTTTCGTTA
TCCGGGCCGGCGCGGAACCG

Product: UbiE/COQ5 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKHHDQVADAFGTTAAAYLTSTVHATGADLQTLADAVRATPDAAVLDLGCGAGHASFAVAPHVRDVVAYDLAAQMLATVD
AAARERGLANIRTQQGPAEQLPFETATFDWVVSRMSAHHWHDMRAALAEVRRVLKPGGRVLMIDIAGNEHPLLDTYLQAA
EVLRDASHVRDYRADEWLAMFRDAGFDAHVHSRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRGYYAVQPDGSF
EHDALLIDAH

Sequences:

>Translated_250_residues
MKHHDQVADAFGTTAAAYLTSTVHATGADLQTLADAVRATPDAAVLDLGCGAGHASFAVAPHVRDVVAYDLAAQMLATVD
AAARERGLANIRTQQGPAEQLPFETATFDWVVSRMSAHHWHDMRAALAEVRRVLKPGGRVLMIDIAGNEHPLLDTYLQAA
EVLRDASHVRDYRADEWLAMFRDAGFDAHVHSRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRGYYAVQPDGSF
EHDALLIDAH
>Mature_250_residues
MKHHDQVADAFGTTAAAYLTSTVHATGADLQTLADAVRATPDAAVLDLGCGAGHASFAVAPHVRDVVAYDLAAQMLATVD
AAARERGLANIRTQQGPAEQLPFETATFDWVVSRMSAHHWHDMRAALAEVRRVLKPGGRVLMIDIAGNEHPLLDTYLQAA
EVLRDASHVRDYRADEWLAMFRDAGFDAHVHSRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRGYYAVQPDGSF
EHDALLIDAH

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=202, Percent_Identity=49.009900990099, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27415; Mature: 27415

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHHDQVADAFGTTAAAYLTSTVHATGADLQTLADAVRATPDAAVLDLGCGAGHASFAVA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEC
PHVRDVVAYDLAAQMLATVDAAARERGLANIRTQQGPAEQLPFETATFDWVVSRMSAHHW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHH
HDMRAALAEVRRVLKPGGRVLMIDIAGNEHPLLDTYLQAAEVLRDASHVRDYRADEWLAM
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
FRDAGFDAHVHSRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRGYYAVQPDGSF
HHHCCCCCEECCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCEEEECCCCCC
EHDALLIDAH
CCCEEEEECC
>Mature Secondary Structure
MKHHDQVADAFGTTAAAYLTSTVHATGADLQTLADAVRATPDAAVLDLGCGAGHASFAVA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEC
PHVRDVVAYDLAAQMLATVDAAARERGLANIRTQQGPAEQLPFETATFDWVVSRMSAHHW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHH
HDMRAALAEVRRVLKPGGRVLMIDIAGNEHPLLDTYLQAAEVLRDASHVRDYRADEWLAM
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
FRDAGFDAHVHSRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRGYYAVQPDGSF
HHHCCCCCEECCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCEEEECCCCCC
EHDALLIDAH
CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]