Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is 78067225

Identifier: 78067225

GI number: 78067225

Start: 2865455

End: 2866456

Strand: Reverse

Name: 78067225

Synonym: Bcep18194_A5756

Alternate gene names: NA

Gene position: 2866456-2865455 (Counterclockwise)

Preceding gene: 78067231

Following gene: 78067223

Centisome position: 77.59

GC content: 67.86

Gene sequence:

>1002_bases
ATGGCGGATGAGCGATTCGACACGGCGCGCGGCTGGCTGCGCATGCTGTCGTGCCTGCTGCTGGTCGTGGCGCTCGGCGC
GCCGTGGGCGTCGGCACGCGCGGATGCCTGTTCGGTCACGCCACCGGCGCCGAGCTTCGGCTCCGTCAGCCCGATCCGGC
TGCTGGCCGTCACGACCACCAGCACGATGACCGTCAACTGCACGTGGGATGTGCTGAGCCTGAACACGGGCGTGCTCGTC
TGCGTGAACCTCGGCGGCACGAGCCCGCGCTACCTGAGCAACGGGACGAACCAGATGCAGTACGACCTGTACCAGGACTC
CGGTTACTCGCAGGCGTGGGGTTCCGTCAGCGCCGGCACCACGCCGATCTCCGTGACGTTGCAGAAACCGTTGCTCGGCA
CCAGCGCGAGCGCGAATATCACCATCTATGGCCGCGTCACGGCCAACCAGCCGACCGTGCCGACCGTGAACAACAGCAGC
ACCGTCTACACCCAGAGCTTCAGCGGCAACCAGGCGACCTACAGCCAGAGCTTTTCGCTGCTCAGCATCCTGCCGACGCT
GACCTGCGCGGCGCAGTCGGCGGCCGGCACGGTGAGCTTCTCCGCCACGGCCACGGTCGCCAACGACTGCATCATCACCG
CGACCGGCGTCGCGTTTCCGGCCACCGGCGTATTGACGTCTCCGCTGGCAGCGGCCGGGTCGATCAATGCGCGCTGCACG
AACGGCGACGCGTTCCAGATTGCGCTGAACGGCGGCAGCAGCGGCAACGTCGCCGCACGCACCATGTCGCGTACGGGCGG
CGGCGGGTCGGTCGGCTATCAGCTTTACGCGGACGGCGGCTATACGACGCCATGGGGCGACGGTACCGGCGGCACGTCGA
TGGCGACGGGGTCGGGCAGCGGATTCAGCCAGACGATACCCGTGTACGGGCGCGTGCCCGCGCAGACAACCCCCGCGCCG
GGCAACTACAGCGATTCGATTACTGCAACGATCAGCTTCTGA

Upstream 100 bases:

>100_bases
AAGAATCGGCGCGAACGACGCAGTACGCGGCCGGCTACCATCGAGGGGCGCGTGGCCTGGCGACGGTTGTCGCGGGGCGA
GCGTGCTTACGGGGAAAACC

Downstream 100 bases:

>100_bases
GTTGCGTCAGTCGCGCACCAGCACCACCAGCTTCAGGTCTTCGCGGTGCGCGGGCTTCAGCGTGATCTGCTGGTACACGA
GGCGGCCGTCGGCCGGATGG

Product: secreted pili protein involved in motility and biofilm formation

Products: NA

Alternate protein names: Spore Coat Protein U Domain-Containing; Spore Coat U Domain Protein; Lipoprotein; Lipoprotein Signal Peptide; Spore Coat Protein U Domain Protein; Spore Coat Protein U; Signal Peptide Protein; Spore Coat Family Protein; Secreted Protein-Like

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MADERFDTARGWLRMLSCLLLVVALGAPWASARADACSVTPPAPSFGSVSPIRLLAVTTTSTMTVNCTWDVLSLNTGVLV
CVNLGGTSPRYLSNGTNQMQYDLYQDSGYSQAWGSVSAGTTPISVTLQKPLLGTSASANITIYGRVTANQPTVPTVNNSS
TVYTQSFSGNQATYSQSFSLLSILPTLTCAAQSAAGTVSFSATATVANDCIITATGVAFPATGVLTSPLAAAGSINARCT
NGDAFQIALNGGSSGNVAARTMSRTGGGGSVGYQLYADGGYTTPWGDGTGGTSMATGSGSGFSQTIPVYGRVPAQTTPAP
GNYSDSITATISF

Sequences:

>Translated_333_residues
MADERFDTARGWLRMLSCLLLVVALGAPWASARADACSVTPPAPSFGSVSPIRLLAVTTTSTMTVNCTWDVLSLNTGVLV
CVNLGGTSPRYLSNGTNQMQYDLYQDSGYSQAWGSVSAGTTPISVTLQKPLLGTSASANITIYGRVTANQPTVPTVNNSS
TVYTQSFSGNQATYSQSFSLLSILPTLTCAAQSAAGTVSFSATATVANDCIITATGVAFPATGVLTSPLAAAGSINARCT
NGDAFQIALNGGSSGNVAARTMSRTGGGGSVGYQLYADGGYTTPWGDGTGGTSMATGSGSGFSQTIPVYGRVPAQTTPAP
GNYSDSITATISF
>Mature_332_residues
ADERFDTARGWLRMLSCLLLVVALGAPWASARADACSVTPPAPSFGSVSPIRLLAVTTTSTMTVNCTWDVLSLNTGVLVC
VNLGGTSPRYLSNGTNQMQYDLYQDSGYSQAWGSVSAGTTPISVTLQKPLLGTSASANITIYGRVTANQPTVPTVNNSST
VYTQSFSGNQATYSQSFSLLSILPTLTCAAQSAAGTVSFSATATVANDCIITATGVAFPATGVLTSPLAAAGSINARCTN
GDAFQIALNGGSSGNVAARTMSRTGGGGSVGYQLYADGGYTTPWGDGTGGTSMATGSGSGFSQTIPVYGRVPAQTTPAPG
NYSDSITATISF

Specific function: Unknown

COG id: COG5430

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33818; Mature: 33687

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADERFDTARGWLRMLSCLLLVVALGAPWASARADACSVTPPAPSFGSVSPIRLLAVTTT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
STMTVNCTWDVLSLNTGVLVCVNLGGTSPRYLSNGTNQMQYDLYQDSGYSQAWGSVSAGT
CEEEEEEEEEEEECCCCEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC
TPISVTLQKPLLGTSASANITIYGRVTANQPTVPTVNNSSTVYTQSFSGNQATYSQSFSL
CEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEECCCCEEEEEECCCCCCCHHHCHHH
LSILPTLTCAAQSAAGTVSFSATATVANDCIITATGVAFPATGVLTSPLAAAGSINARCT
HHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCHHHCCHHHCCCCCEEEC
NGDAFQIALNGGSSGNVAARTMSRTGGGGSVGYQLYADGGYTTPWGDGTGGTSMATGSGS
CCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCC
GFSQTIPVYGRVPAQTTPAPGNYSDSITATISF
CCCEECCEEECCCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
ADERFDTARGWLRMLSCLLLVVALGAPWASARADACSVTPPAPSFGSVSPIRLLAVTTT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
STMTVNCTWDVLSLNTGVLVCVNLGGTSPRYLSNGTNQMQYDLYQDSGYSQAWGSVSAGT
CEEEEEEEEEEEECCCCEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC
TPISVTLQKPLLGTSASANITIYGRVTANQPTVPTVNNSSTVYTQSFSGNQATYSQSFSL
CEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEECCCCEEEEEECCCCCCCHHHCHHH
LSILPTLTCAAQSAAGTVSFSATATVANDCIITATGVAFPATGVLTSPLAAAGSINARCT
HHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCHHHCCHHHCCCCCEEEC
NGDAFQIALNGGSSGNVAARTMSRTGGGGSVGYQLYADGGYTTPWGDGTGGTSMATGSGS
CCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCC
GFSQTIPVYGRVPAQTTPAPGNYSDSITATISF
CCCEECCEEECCCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA