| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yjgI [H]
Identifier: 78067180
GI number: 78067180
Start: 2819117
End: 2819857
Strand: Reverse
Name: yjgI [H]
Synonym: Bcep18194_A5711
Alternate gene names: 78067180
Gene position: 2819857-2819117 (Counterclockwise)
Preceding gene: 78067182
Following gene: 78067178
Centisome position: 76.33
GC content: 70.18
Gene sequence:
>741_bases ATGAACCGACTTCAGGGCAAGCGTGCACTCATCACGGGCGGCAGCCGCGGCATCGGTGCGGCGATCGCGAAACGGCTGGC GGCCGATGGCGCGGACGTCGCGATTACCTACGAGAAATCGGCCGAGCGGGCGCAGGCCGTCGTCGCCGGCATCGAGGCGC TGGGCCGCCGCGCCGTCGCGATCCAGGCCGACAGCGCCGATCCGGTGGCCGTGCGCGACGCGGTCGATCGTGCTGCGGAG GCGTTCGGCGGCCTCGACATTCTCGTCAACAACGCGGGGATCTTCAGGGCCGGCGCGCTGGGCGACCTCACGCTCGACGA TATCGACGCAACGTTGAACGTGAACGTGCGCGCGGTGATCGTCGCGTCGCAGGCGGCGGCACGGCATCTCGGGGAGGGCG GGCGCATCGTGTCGACCGGCAGTTGCCTCGCGACGCGCGTGCCCGATGCGGGGATGAGCCTCTATGCGGCGAGCAAGGCC GCGCTGATCGGCTGGACGCAGGGGCTCGCGCGCGATCTCGGTTCGCGCGGCATCACGGTCAATATCGTGCATCCGGGGTC GACGGATACCGACATGAACCCGGCCGGCGGTGAGCATGCCGATGCGCAGCGTTCGCGGATGGCGATCCCGCAGTACGGCA AAGCCGACGACGTGGCGGCGCTCGTCGCGTTCGTGGTCGGGCCGGAAGGGCGGTCGATCAACGGGACGGGGTTGACGATC GATGGTGGCGCGAACGCGTGA
Upstream 100 bases:
>100_bases GCAGATATCTGTATCGATCGATAAATTAAATCAATTGACTGTGTCGCGCAACTTGCCACATTCTGTGTCGGTCGTTACAT AAATGAGGAAAGGAACCGAC
Downstream 100 bases:
>100_bases TTGCGTGAATGCCGACGCCCGGCGTGGGTTTTCGACCGGGCGGTGTTGCGTTCGTTATCGGCAGCCGAGCTGGTGATGCT CGGTTTCGAGATCGGCGCGC
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVAIQADSADPVAVRDAVDRAAE AFGGLDILVNNAGIFRAGALGDLTLDDIDATLNVNVRAVIVASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKA ALIGWTQGLARDLGSRGITVNIVHPGSTDTDMNPAGGEHADAQRSRMAIPQYGKADDVAALVAFVVGPEGRSINGTGLTI DGGANA
Sequences:
>Translated_246_residues MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVAIQADSADPVAVRDAVDRAAE AFGGLDILVNNAGIFRAGALGDLTLDDIDATLNVNVRAVIVASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKA ALIGWTQGLARDLGSRGITVNIVHPGSTDTDMNPAGGEHADAQRSRMAIPQYGKADDVAALVAFVVGPEGRSINGTGLTI DGGANA >Mature_246_residues MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVAIQADSADPVAVRDAVDRAAE AFGGLDILVNNAGIFRAGALGDLTLDDIDATLNVNVRAVIVASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKA ALIGWTQGLARDLGSRGITVNIVHPGSTDTDMNPAGGEHADAQRSRMAIPQYGKADDVAALVAFVVGPEGRSINGTGLTI DGGANA
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=33.0677290836653, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=31.9148936170213, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=34.375, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI5031737, Length=255, Percent_Identity=32.156862745098, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=33.6734693877551, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=30.8, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=35.978835978836, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI224922801, Length=182, Percent_Identity=32.967032967033, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI40254986, Length=194, Percent_Identity=30.9278350515464, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=27.5590551181102, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=35.2040816326531, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4758504, Length=256, Percent_Identity=31.25, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI4557649, Length=199, Percent_Identity=28.643216080402, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=28.4, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=28.4974093264249, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI32455239, Length=180, Percent_Identity=30.5555555555556, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI5031765, Length=180, Percent_Identity=30.5555555555556, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI83715985, Length=190, Percent_Identity=33.1578947368421, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI2367365, Length=242, Percent_Identity=48.3471074380165, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=38.9558232931727, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=36.5758754863813, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1789378, Length=214, Percent_Identity=39.7196261682243, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=36.0323886639676, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=33.9920948616601, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=33.0578512396694, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=31.7073170731707, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=30.6122448979592, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=32.3886639676113, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=30.5882352941176, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=28.125, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=34.156378600823, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=33.2075471698113, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=32.295719844358, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=31.4285714285714, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=33.9622641509434, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=32.1138211382114, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=32.8063241106719, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=32.8301886792453, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=33.0798479087452, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=33.8289962825279, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=32.4427480916031, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=29.3172690763052, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=32.4626865671642, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=27.8625954198473, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=31.9391634980989, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=33.5820895522388, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17562904, Length=244, Percent_Identity=32.7868852459016, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17560332, Length=244, Percent_Identity=31.1475409836066, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=32.0754716981132, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=31.3432835820896, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=32.0610687022901, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=30.1526717557252, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=31.0861423220974, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=28.8617886178862, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17565030, Length=242, Percent_Identity=30.1652892561983, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=32.4742268041237, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17538182, Length=258, Percent_Identity=29.8449612403101, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=27.979274611399, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536025, Length=249, Percent_Identity=29.718875502008, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=28.3505154639175, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=29.5719844357977, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508651, Length=252, Percent_Identity=26.1904761904762, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=27.6381909547739, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=232, Percent_Identity=29.7413793103448, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=23.6947791164659, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=35.5731225296443, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=32.9317269076305, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=31.7647058823529, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI28571526, Length=261, Percent_Identity=32.5670498084291, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=30.952380952381, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21357041, Length=260, Percent_Identity=31.5384615384615, Blast_Score=94, Evalue=8e-20, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=30.8641975308642, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24641232, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI116007234, Length=239, Percent_Identity=29.2887029288703, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24644337, Length=250, Percent_Identity=30.8, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI17737361, Length=250, Percent_Identity=30.4, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24665243, Length=197, Percent_Identity=32.48730964467, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221331218, Length=197, Percent_Identity=32.48730964467, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI221331216, Length=198, Percent_Identity=32.3232323232323, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24665247, Length=198, Percent_Identity=32.3232323232323, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571387, Length=235, Percent_Identity=28.936170212766, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007236, Length=240, Percent_Identity=27.0833333333333, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24648944, Length=196, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI24663911, Length=241, Percent_Identity=27.3858921161826, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24656154, Length=206, Percent_Identity=30.5825242718447, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI19922628, Length=206, Percent_Identity=30.5825242718447, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641388, Length=242, Percent_Identity=28.099173553719, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007232, Length=133, Percent_Identity=35.3383458646617, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 24819; Mature: 24819
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVA CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEE IQADSADPVAVRDAVDRAAEAFGGLDILVNNAGIFRAGALGDLTLDDIDATLNVNVRAVI EEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCCCCCCCCEEEECCEEEEE VASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKAALIGWTQGLARDLGSRGITV EECHHHHHHHCCCCEEEECCCEEEECCCCCCCEEEECCCCCEEEHHHHHHHHHCCCCCEE NIVHPGSTDTDMNPAGGEHADAQRSRMAIPQYGKADDVAALVAFVVGPEGRSINGTGLTI EEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHEECCCCCEECCCEEEE DGGANA CCCCCC >Mature Secondary Structure MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVA CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEE IQADSADPVAVRDAVDRAAEAFGGLDILVNNAGIFRAGALGDLTLDDIDATLNVNVRAVI EEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCCCCCCCCEEEECCEEEEE VASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKAALIGWTQGLARDLGSRGITV EECHHHHHHHCCCCEEEECCCEEEECCCCCCCEEEECCCCCEEEHHHHHHHHHCCCCCEE NIVHPGSTDTDMNPAGGEHADAQRSRMAIPQYGKADDVAALVAFVVGPEGRSINGTGLTI EEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHEECCCCCEECCCEEEE DGGANA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]