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The map label for this gene is nqo2 [H]

Identifier: 78067042

GI number: 78067042

Start: 2671596

End: 2672081

Strand: Reverse

Name: nqo2 [H]

Synonym: Bcep18194_A5573

Alternate gene names: 78067042

Gene position: 2672081-2671596 (Counterclockwise)

Preceding gene: 78067043

Following gene: 78067041

Centisome position: 72.33

GC content: 60.49

Gene sequence:

>486_bases
ATGATCTCAGCTGAAGGCCTGAAGGAAATCGATCGAGCGTTGACGAAGTATCCCGCCGATCAGAAACAGTCCGCCGTGAT
GTCGGCATTGGCCGTTGCTCAGGAAGAGCACGGCTGGCTGTCGCCCGAACTGATGCAGTTCGTCGCGGACTATCTCGGCA
TGCCGGCCGTTGCCGTGCAGGAAGTCGCGACGTTCTACACGATGTACGAGCTCAACCCGGTCGGCAAGCACAAGATCACG
CTCTGCACGAACCTGCCGTGCCAGCTCGGCCCGGACGGTGGCGCGGAAGCGACTGCCGACTACCTGAAACAGAAGCTCGG
CATCGGCTTCGGCGAGACCACGCCCGACGGCAAGTTCACGCTGAAGGAAGGCGAATGCATGGGCTCGTGCGGCGATGCGC
CGGTGCTGCTGGTGAACAATCACAGAATGTGCAGCTTCATGAGCCGCGAGAAGATCGACCAGCTGCTTGAGGAGCTCTCG
AAATGA

Upstream 100 bases:

>100_bases
CGCAAGCTGTCAACAGAGTGAGCGCCAGGTCTGCCGTCCATGCACCCCAATGTGCGGCAGGTTGTTCGTTCGGTAGGAAT
TGAAAGAGTCGTGTCTGAAA

Downstream 100 bases:

>100_bases
CGTCCCTCCACGACCGTCACATCAAACCGCTGATCCTCGCTGGTCTGAACGGCGAGAACTGGCATCTCGAAGATTACGTT
GCGCGCGGCGGCTACAAGCA

Product: NADH dehydrogenase subunit E

Products: NA

Alternate protein names: NADH dehydrogenase I chain 2; NDH-1 subunit 2 [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MISAEGLKEIDRALTKYPADQKQSAVMSALAVAQEEHGWLSPELMQFVADYLGMPAVAVQEVATFYTMYELNPVGKHKIT
LCTNLPCQLGPDGGAEATADYLKQKLGIGFGETTPDGKFTLKEGECMGSCGDAPVLLVNNHRMCSFMSREKIDQLLEELS
K

Sequences:

>Translated_161_residues
MISAEGLKEIDRALTKYPADQKQSAVMSALAVAQEEHGWLSPELMQFVADYLGMPAVAVQEVATFYTMYELNPVGKHKIT
LCTNLPCQLGPDGGAEATADYLKQKLGIGFGETTPDGKFTLKEGECMGSCGDAPVLLVNNHRMCSFMSREKIDQLLEELS
K
>Mature_161_residues
MISAEGLKEIDRALTKYPADQKQSAVMSALAVAQEEHGWLSPELMQFVADYLGMPAVAVQEVATFYTMYELNPVGKHKIT
LCTNLPCQLGPDGGAEATADYLKQKLGIGFGETTPDGKFTLKEGECMGSCGDAPVLLVNNHRMCSFMSREKIDQLLEELS
K

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is menaquinone. Couples the redox reaction to proton translocation (for every

COG id: COG1905

COG function: function code C; NADH:ubiquinone oxidoreductase 24 kD subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 24 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI222080062, Length=158, Percent_Identity=39.873417721519, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1788621, Length=156, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17561328, Length=158, Percent_Identity=37.9746835443038, Blast_Score=116, Evalue=5e-27,
Organism=Drosophila melanogaster, GI18859877, Length=154, Percent_Identity=39.6103896103896, Blast_Score=120, Evalue=3e-28,
Organism=Drosophila melanogaster, GI21355353, Length=139, Percent_Identity=37.410071942446, Blast_Score=105, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 17564; Mature: 17564

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS01099 COMPLEX1_24K

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAEGLKEIDRALTKYPADQKQSAVMSALAVAQEEHGWLSPELMQFVADYLGMPAVAVQ
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
EVATFYTMYELNPVGKHKITLCTNLPCQLGPDGGAEATADYLKQKLGIGFGETTPDGKFT
HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEE
LKEGECMGSCGDAPVLLVNNHRMCSFMSREKIDQLLEELSK
EECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISAEGLKEIDRALTKYPADQKQSAVMSALAVAQEEHGWLSPELMQFVADYLGMPAVAVQ
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
EVATFYTMYELNPVGKHKITLCTNLPCQLGPDGGAEATADYLKQKLGIGFGETTPDGKFT
HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEE
LKEGECMGSCGDAPVLLVNNHRMCSFMSREKIDQLLEELSK
EECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9020134 [H]