| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067006
Identifier: 78067006
GI number: 78067006
Start: 2630030
End: 2630581
Strand: Reverse
Name: 78067006
Synonym: Bcep18194_A5537
Alternate gene names: NA
Gene position: 2630581-2630030 (Counterclockwise)
Preceding gene: 78067007
Following gene: 78067005
Centisome position: 71.21
GC content: 62.86
Gene sequence:
>552_bases ATGTTGGGTTCTTCGTTCATCCGCACGACGGTTGCGGTAGCGGCGGCGCTTGCCGCGATGTCGGCCTCGGCTGCCGAATA TCCGATCGGCAAGCAGCAGATCCAGGGCGGCATGGAAATCGGCGCGGTGTACCTGCAGCCGATCACGATGGACCCGGAAG GGATGATGCGCAAGGCGTCGGATTCCGACATCCACCTCGAGGCCGACATCCATGCGGTCAAGAACAACCCGACGGGTTTC GCGGAAGGCGACTGGATGCCGTACCTGCAGGTCACGTACAAGCTGACGAAGCAGGGCGACGCGAAGTGGAAGGCTGAAGG CGACCTGATGGGCATGGTCGCGAGCGACGGCCCGCACTACGGCGACAACGTGAAGCTGAACGGCCCGGGCAAGTATCACC TGACGATGGTCGTCAAGCCGCCGATGCAGACGGGCCACATGGCGTTCGGCCGTCACATCGACAAGGAAACGGGCGTGGGC GCATGGTTCAAGCCCGTTACCCTCGAGTACGACTTCCCGTTCGCCGGTATCGGCAAGAAGGGCGGTTACTGA
Upstream 100 bases:
>100_bases AGAATTGTTCGCATTAACGTTCTTCGTCGCGTTAGTGTTTTCAGTGGGCCGGCCAGGCGGTCGGTCCGCATGGTTCCAGA TCAAATAACAAGGAGTGTCC
Downstream 100 bases:
>100_bases TCGGTGGCATCACGGACGGCGCGCTTCGGCGCGCCGTCGGCGTAGAGAACCCAGAATGAAAATTCCCCAGAAAGTCTTTG CCGCAGCCGCTGCGTTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGF AEGDWMPYLQVTYKLTKQGDAKWKAEGDLMGMVASDGPHYGDNVKLNGPGKYHLTMVVKPPMQTGHMAFGRHIDKETGVG AWFKPVTLEYDFPFAGIGKKGGY
Sequences:
>Translated_183_residues MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGF AEGDWMPYLQVTYKLTKQGDAKWKAEGDLMGMVASDGPHYGDNVKLNGPGKYHLTMVVKPPMQTGHMAFGRHIDKETGVG AWFKPVTLEYDFPFAGIGKKGGY >Mature_183_residues MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGF AEGDWMPYLQVTYKLTKQGDAKWKAEGDLMGMVASDGPHYGDNVKLNGPGKYHLTMVVKPPMQTGHMAFGRHIDKETGVG AWFKPVTLEYDFPFAGIGKKGGY
Specific function: Unknown
COG id: COG3470
COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0423 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018470 [H]
Pfam domain/function: PF10634 Iron_transport [H]
EC number: NA
Molecular weight: Translated: 19741; Mature: 19741
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKAS CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEEEEECHHHHHHCCC DSDIHLEADIHAVKNNPTGFAEGDWMPYLQVTYKLTKQGDAKWKAEGDLMGMVASDGPHY CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCCC GDNVKLNGPGKYHLTMVVKPPMQTGHMAFGRHIDKETGVGAWFKPVTLEYDFPFAGIGKK CCCEEECCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCEECCEEEEECCCCCCCCCC GGY CCC >Mature Secondary Structure MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKAS CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEEEEECHHHHHHCCC DSDIHLEADIHAVKNNPTGFAEGDWMPYLQVTYKLTKQGDAKWKAEGDLMGMVASDGPHY CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCCC GDNVKLNGPGKYHLTMVVKPPMQTGHMAFGRHIDKETGVGAWFKPVTLEYDFPFAGIGKK CCCEEECCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCEECCEEEEECCCCCCCCCC GGY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]