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The map label for this gene is oruR [H]

Identifier: 78066969

GI number: 78066969

Start: 2589206

End: 2590243

Strand: Reverse

Name: oruR [H]

Synonym: Bcep18194_A5500

Alternate gene names: 78066969

Gene position: 2590243-2589206 (Counterclockwise)

Preceding gene: 78066971

Following gene: 78066963

Centisome position: 70.12

GC content: 68.4

Gene sequence:

>1038_bases
ATGGTCCTGTCCGTCCCGGATGCCGCGCGCCAGCTGAACAAGGCGACGGTATCGTCCGCGTATGCGCTGTTCATGCTGAT
GCTGGCCGAGGAGCGCGGCATCGACGGCGACCGCGTGCTTGCCGGCTCGGGCGTCGAGCGCGACCGGCTCGCGCAGCCCG
ATGCGCGCATCACGCCGCTGCAGCAGGCGGCGATCGTGTTCAACCTGCTCGACGCGACCGACGATCCGTCGATCGCGATC
GAGATCGGCCTGCGCAGCAGCCTGACGAAAGCGGGACTGATCGGCTTCGGGCTGATGAGCTGCGCGACGCTCGGCGAGGC
GATCTCGCTCGGCATCCGCTACCTGCCGACACGCGTGCCGTTCTTCTCGGTGCGGCTCGCGCAGCTCGACGGGATCGTCG
ATATCGACGTGCTCGAGGCGTTTCCGCTCGGCCGGTTGCGGCAGTTTGCGGTCGAGAACTTCCTGGTCGAGACGGCGATC
CTGTTCAATTCGCTGCTGTATCCGGTGCCAGGGCGCACGCTGCAGTCGCGTGCCGAACTCCATTTCGAATGGCCGGAGCC
GCCGTGGTTCGAGCGTTATCGCGCGCGACTGCCGCGCTGTCACTTCGACGCGAGCGCCAACCGCATCCGCTGCGACGCCG
CGCTGCTCGACGAGCCGATCGGTACCGCGAATGCGCACACCGCGCAGATGATCGTGCAGCAGTGCGAGGCCGAACTCGCG
CGGCTCGGCTATGCGGAAAGCATCGTCGAGCGCGTGCGCAACCTGCTGATTTGCGGCGAGGGCGGCTATCCGTCGGTCGA
CGACGTCGCGCGCGAACTGCATGTGTCGGCGCGGACGCTCAAGCGCAAGCTCGCCGAGTACGGCGCGACCTATTCGGCGC
TGCTCGACGAGATTCGGCTGCGCGACGCGCTGCGGCTGCTCGAGGGGACACGGCTGCCGGTCGACGAGATCGCCGCGCGC
GTCGGCTATACGGATCGCGCCAATTTCACGCGCGCGTTCAAGCGCTGGACGGGCGTCGCGCCGAGCGAGCGGCGCTGA

Upstream 100 bases:

>100_bases
TCGGGCCACGATGGCCGGCCGGCGCGGCTAGAGTCTTGCCCCGGTGTCATTGCGGGCCAGCGACGCTACAATCCGCCGAA
ACCGCTTCGGAGTCCGCCGC

Downstream 100 bases:

>100_bases
ACGCGGGGCCGCACCGGCCTGCATGGCGGGCCTGCCGAGTCAGGTTCCGTGCGCCACGACTTCATCAGACGATCGCGACC
CAGTTCGCACCGCGTCCGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MVLSVPDAARQLNKATVSSAYALFMLMLAEERGIDGDRVLAGSGVERDRLAQPDARITPLQQAAIVFNLLDATDDPSIAI
EIGLRSSLTKAGLIGFGLMSCATLGEAISLGIRYLPTRVPFFSVRLAQLDGIVDIDVLEAFPLGRLRQFAVENFLVETAI
LFNSLLYPVPGRTLQSRAELHFEWPEPPWFERYRARLPRCHFDASANRIRCDAALLDEPIGTANAHTAQMIVQQCEAELA
RLGYAESIVERVRNLLICGEGGYPSVDDVARELHVSARTLKRKLAEYGATYSALLDEIRLRDALRLLEGTRLPVDEIAAR
VGYTDRANFTRAFKRWTGVAPSERR

Sequences:

>Translated_345_residues
MVLSVPDAARQLNKATVSSAYALFMLMLAEERGIDGDRVLAGSGVERDRLAQPDARITPLQQAAIVFNLLDATDDPSIAI
EIGLRSSLTKAGLIGFGLMSCATLGEAISLGIRYLPTRVPFFSVRLAQLDGIVDIDVLEAFPLGRLRQFAVENFLVETAI
LFNSLLYPVPGRTLQSRAELHFEWPEPPWFERYRARLPRCHFDASANRIRCDAALLDEPIGTANAHTAQMIVQQCEAELA
RLGYAESIVERVRNLLICGEGGYPSVDDVARELHVSARTLKRKLAEYGATYSALLDEIRLRDALRLLEGTRLPVDEIAAR
VGYTDRANFTRAFKRWTGVAPSERR
>Mature_345_residues
MVLSVPDAARQLNKATVSSAYALFMLMLAEERGIDGDRVLAGSGVERDRLAQPDARITPLQQAAIVFNLLDATDDPSIAI
EIGLRSSLTKAGLIGFGLMSCATLGEAISLGIRYLPTRVPFFSVRLAQLDGIVDIDVLEAFPLGRLRQFAVENFLVETAI
LFNSLLYPVPGRTLQSRAELHFEWPEPPWFERYRARLPRCHFDASANRIRCDAALLDEPIGTANAHTAQMIVQQCEAELA
RLGYAESIVERVRNLLICGEGGYPSVDDVARELHVSARTLKRKLAEYGATYSALLDEIRLRDALRLLEGTRLPVDEIAAR
VGYTDRANFTRAFKRWTGVAPSERR

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786758, Length=105, Percent_Identity=36.1904761904762, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38255; Mature: 38255

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSVPDAARQLNKATVSSAYALFMLMLAEERGIDGDRVLAGSGVERDRLAQPDARITPL
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCCCCCCCHH
QQAAIVFNLLDATDDPSIAIEIGLRSSLTKAGLIGFGLMSCATLGEAISLGIRYLPTRVP
HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FFSVRLAQLDGIVDIDVLEAFPLGRLRQFAVENFLVETAILFNSLLYPVPGRTLQSRAEL
HHHHHHHHHCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCE
HFEWPEPPWFERYRARLPRCHFDASANRIRCDAALLDEPIGTANAHTAQMIVQQCEAELA
EEECCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RLGYAESIVERVRNLLICGEGGYPSVDDVARELHVSARTLKRKLAEYGATYSALLDEIRL
HCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RDALRLLEGTRLPVDEIAARVGYTDRANFTRAFKRWTGVAPSERR
HHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVLSVPDAARQLNKATVSSAYALFMLMLAEERGIDGDRVLAGSGVERDRLAQPDARITPL
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCCCCCCCHH
QQAAIVFNLLDATDDPSIAIEIGLRSSLTKAGLIGFGLMSCATLGEAISLGIRYLPTRVP
HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FFSVRLAQLDGIVDIDVLEAFPLGRLRQFAVENFLVETAILFNSLLYPVPGRTLQSRAEL
HHHHHHHHHCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCE
HFEWPEPPWFERYRARLPRCHFDASANRIRCDAALLDEPIGTANAHTAQMIVQQCEAELA
EEECCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RLGYAESIVERVRNLLICGEGGYPSVDDVARELHVSARTLKRKLAEYGATYSALLDEIRL
HCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RDALRLLEGTRLPVDEIAARVGYTDRANFTRAFKRWTGVAPSERR
HHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]