| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is cicA [H]
Identifier: 78066971
GI number: 78066971
Start: 2591567
End: 2592373
Strand: Reverse
Name: cicA [H]
Synonym: Bcep18194_A5502
Alternate gene names: 78066971
Gene position: 2592373-2591567 (Counterclockwise)
Preceding gene: 78066972
Following gene: 78066969
Centisome position: 70.18
GC content: 67.78
Gene sequence:
>807_bases ATGTCGTGCTGCCGGCGGCATTGGCGGCGCGGCCGCAACGCTGAGCGCACGGCACGAAGGGCACGAACGCGTGCGCGGCG GCGCGCGCGTTCGCTGTGCGGGCCGCGCCGCATCACTTCATTTCACGTGCACCGGCGCGAGTCTGCTATCTTCCCGGGCA TCTCATCGCTTTCCCGCCGATTCTCCATGACTGACCGCATCGTTGCCGCATTCGATTTCGACGGCACCATCACGACCACC GACAGCTTTCGCCATTTCGTCCGCTATGCGGTCGGCACGCCGCGCTTCGCGTGGGCCGGATTGCGCGCGCTGCCGTGGAT TATCGCGATGAAGGCCGGGCTGATATCGCGTGGCGACGCGAAAGCGAAATTTGCGTCGTTCGCATTCGGGCCGGTGCGCG AGGACGCGCTCGATGCGCAGGCGCGCACGTTCGTCGACAGCTATCTGCCGAGCCTCGTGCGTCCGGAAATGCTCGAACGC ATCCGCGAGCATCGGGCACGCGGGCACGAAGTCGTACTGGTGAGCGCGTCGCCGTCGCTGTATCTGGAGAAGTGGGCGAA GACGGCCGGCTTCGATGCGGTGCTCGCGACGCGGCTGGCGTTCGAGCGCGGCAGCTTCGCCGGGCGGCTCGACGGCGAAA ACTGCTGGGGGCCGCAGAAGGTCGTGCGGCTGCGCGGGTGGTGGGGCAACCGGCCGCCGAAACAATTGTTCGCGTACGGC GACAGCCGCGGCGATAAGGAAATGGCCGAGCTCGCGAACTGGTCGTGGATCCGCGGGCAAGGGCCGATGCCGCCGATCGG CGGCTGA
Upstream 100 bases:
>100_bases GTCGGGCAGGCGGTGCAGCAGATCCGCATGCAGCCTGCGCAATTGCGCGGGCTCGACGAGCGCGTGACCGATCTGCTGTC GCGCGCCGATCACCTGATGA
Downstream 100 bases:
>100_bases GGGGGGCGTTACGCGTCGGCCTGAGCCTGGCGCGTACCACGCGACGGGCGATAACCGCTCCAGCGATTCGCCCGCGCGAA CGTGCCGACGTCGTTGAAGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSCCRRHWRRGRNAERTARRARTRARRRARSLCGPRRITSFHVHRRESAIFPGISSLSRRFSMTDRIVAAFDFDGTITTT DSFRHFVRYAVGTPRFAWAGLRALPWIIAMKAGLISRGDAKAKFASFAFGPVREDALDAQARTFVDSYLPSLVRPEMLER IREHRARGHEVVLVSASPSLYLEKWAKTAGFDAVLATRLAFERGSFAGRLDGENCWGPQKVVRLRGWWGNRPPKQLFAYG DSRGDKEMAELANWSWIRGQGPMPPIGG
Sequences:
>Translated_268_residues MSCCRRHWRRGRNAERTARRARTRARRRARSLCGPRRITSFHVHRRESAIFPGISSLSRRFSMTDRIVAAFDFDGTITTT DSFRHFVRYAVGTPRFAWAGLRALPWIIAMKAGLISRGDAKAKFASFAFGPVREDALDAQARTFVDSYLPSLVRPEMLER IREHRARGHEVVLVSASPSLYLEKWAKTAGFDAVLATRLAFERGSFAGRLDGENCWGPQKVVRLRGWWGNRPPKQLFAYG DSRGDKEMAELANWSWIRGQGPMPPIGG >Mature_267_residues SCCRRHWRRGRNAERTARRARTRARRRARSLCGPRRITSFHVHRRESAIFPGISSLSRRFSMTDRIVAAFDFDGTITTTD SFRHFVRYAVGTPRFAWAGLRALPWIIAMKAGLISRGDAKAKFASFAFGPVREDALDAQARTFVDSYLPSLVRPEMLERI REHRARGHEVVLVSASPSLYLEKWAKTAGFDAVLATRLAFERGSFAGRLDGENCWGPQKVVRLRGWWGNRPPKQLFAYGD SRGDKEMAELANWSWIRGQGPMPPIGG
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 30437; Mature: 30306
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCCRRHWRRGRNAERTARRARTRARRRARSLCGPRRITSFHVHRRESAIFPGISSLSRR CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH FSMTDRIVAAFDFDGTITTTDSFRHFVRYAVGTPRFAWAGLRALPWIIAMKAGLISRGDA HHHHHHEEEEEECCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC KAKFASFAFGPVREDALDAQARTFVDSYLPSLVRPEMLERIREHRARGHEVVLVSASPSL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHH YLEKWAKTAGFDAVLATRLAFERGSFAGRLDGENCWGPQKVVRLRGWWGNRPPKQLFAYG HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC DSRGDKEMAELANWSWIRGQGPMPPIGG CCCCHHHHHHHHCCCEECCCCCCCCCCC >Mature Secondary Structure SCCRRHWRRGRNAERTARRARTRARRRARSLCGPRRITSFHVHRRESAIFPGISSLSRR CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH FSMTDRIVAAFDFDGTITTTDSFRHFVRYAVGTPRFAWAGLRALPWIIAMKAGLISRGDA HHHHHHEEEEEECCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC KAKFASFAFGPVREDALDAQARTFVDSYLPSLVRPEMLERIREHRARGHEVVLVSASPSL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHH YLEKWAKTAGFDAVLATRLAFERGSFAGRLDGENCWGPQKVVRLRGWWGNRPPKQLFAYG HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC DSRGDKEMAELANWSWIRGQGPMPPIGG CCCCHHHHHHHHCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11169108 [H]