| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066869
Identifier: 78066869
GI number: 78066869
Start: 2468138
End: 2469283
Strand: Reverse
Name: 78066869
Synonym: Bcep18194_A5400
Alternate gene names: NA
Gene position: 2469283-2468138 (Counterclockwise)
Preceding gene: 78066870
Following gene: 78066868
Centisome position: 66.84
GC content: 66.84
Gene sequence:
>1146_bases ATGAAACGTTTCGCCTTTTCTTCTCGCGCCATCCAGATGTCGGTGGTGGCGCTGGCGCTGGGCGCGCTCGCCGGCTGCGA TACGCTGAACGACTACCTGGCCCCTGACCGGGTCAACTACAAGAACACCGGTTCGGCGCCGCCGCTCGCTGTGCCGAGCG ACCTGAAGCCGGTGCCGACGACGCAGCAGTTCGTCGCGCCGCCGAGCAACGCGGGCCTCGGCACGCTGCCCCCGCGGGTC ACGACGCAGGCCGGCAACGCGACCGACGGCATCCCGAGCGCGCAGGATCCGCTTGGCATGCACATCGAGCGCGACGGCGA CCGCCGCTGGCTCGTCGTCGATGGCCGGACGCCCGAGCAGCTGTGGCCGATCCTGAAGGAGTTCTGGCAGGAGAACGGCT TCTCGCTGAAGACCGACGCGCCGTCGACGGGCATCATGGCCACCGACTGGGCTGAAAACCGCGCGAACATCCCCGATGAC TGGTTCCGCCGCACGATCGGCAAGGTCATCGATTTCGCGTACTCGTCCGGCACGCGCGACCGCTTCCGGACGCTCGTGAA CCGCACGTCGGACGGCAACACCGACATCTCGATCACGCACAGCGCGATGGAAGAAATGATGGTCGGCCCGCAGGGCGGCA CGTCGTCGCGCTGGGAAGAGCGTCCGCGCAACCCGGTGCTCGAAGCCGTATTCCTGTCGAAGCTGATGCAGAAGTTCGGC CTGACCGATGCGCAGGCGAAGCAGCTGCTGACCGATGCACATCCCGCGACGGCGCCGACGCAGGTCAGCGACACGAGCAG CGGCGGGGCGACGCTGCAACTGGCCGAGTCGTTCGACCGCGCATGGCTGCGTGTGGGTCTGGCGCTCGACCGCACCAACT TCGCGGTCGACAATCGCGATCGCGAGAAGGGTGTGTACACCGTGCGCTATGCGAACACGATGGAAGAGCTGAAGCGCGAC GGCCTGTTTGGCAAGCTGTTCTACGGTGGCCCGTCGGCTGCGAAGCCGGGCAGGGAATTCCTGGTCAACGTGCGCGCACA GGGCAACGGCAGCACGCAGGTTGCGGTGGTCGGCGCAAACGGCCAGGTTGACAACTCGTCGGACGCGCAGCGGATCATTT CGCTGCTCCACGCGCAGCTGAACTGA
Upstream 100 bases:
>100_bases CCGCGTCCTGCGGCCGCCGGCTCGAACCCTGATCAACCCGCACCGGCCGGCTCCGTCCGGCGCCGCTCCTGACGAGCGTT CTAGCAAGACGAAGGATTTC
Downstream 100 bases:
>100_bases GCGCGTGCGATTCTCCAGCCTCGGAAGCGGCAGCGAAGGCAACGCGCTGGTCGTCGAGGCCTCGAGCGGCACGACGACCA CCCGCGTGCTGCTCGACTGC
Product: uncharacterized lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKRFAFSSRAIQMSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVPTTQQFVAPPSNAGLGTLPPRV TTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQLWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDD WFRRTIGKVIDFAYSSGTRDRFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG LTDAQAKQLLTDAHPATAPTQVSDTSSGGATLQLAESFDRAWLRVGLALDRTNFAVDNRDREKGVYTVRYANTMEELKRD GLFGKLFYGGPSAAKPGREFLVNVRAQGNGSTQVAVVGANGQVDNSSDAQRIISLLHAQLN
Sequences:
>Translated_381_residues MKRFAFSSRAIQMSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVPTTQQFVAPPSNAGLGTLPPRV TTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQLWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDD WFRRTIGKVIDFAYSSGTRDRFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG LTDAQAKQLLTDAHPATAPTQVSDTSSGGATLQLAESFDRAWLRVGLALDRTNFAVDNRDREKGVYTVRYANTMEELKRD GLFGKLFYGGPSAAKPGREFLVNVRAQGNGSTQVAVVGANGQVDNSSDAQRIISLLHAQLN >Mature_381_residues MKRFAFSSRAIQMSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVPTTQQFVAPPSNAGLGTLPPRV TTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQLWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDD WFRRTIGKVIDFAYSSGTRDRFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG LTDAQAKQLLTDAHPATAPTQVSDTSSGGATLQLAESFDRAWLRVGLALDRTNFAVDNRDREKGVYTVRYANTMEELKRD GLFGKLFYGGPSAAKPGREFLVNVRAQGNGSTQVAVVGANGQVDNSSDAQRIISLLHAQLN
Specific function: Unknown
COG id: COG3317
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41497; Mature: 41497
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFAFSSRAIQMSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVPT CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TQQFVAPPSNAGLGTLPPRVTTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQ CHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH LWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDDWFRRTIGKVIDFAYSSGTRD HHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH RFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG HHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC LTDAQAKQLLTDAHPATAPTQVSDTSSGGATLQLAESFDRAWLRVGLALDRTNFAVDNRD CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHEECCCCCEECCCC REKGVYTVRYANTMEELKRDGLFGKLFYGGPSAAKPGREFLVNVRAQGNGSTQVAVVGAN CCCCEEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEECC GQVDNSSDAQRIISLLHAQLN CCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKRFAFSSRAIQMSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVPT CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TQQFVAPPSNAGLGTLPPRVTTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQ CHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH LWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDDWFRRTIGKVIDFAYSSGTRD HHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH RFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG HHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC LTDAQAKQLLTDAHPATAPTQVSDTSSGGATLQLAESFDRAWLRVGLALDRTNFAVDNRD CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHEECCCCCEECCCC REKGVYTVRYANTMEELKRDGLFGKLFYGGPSAAKPGREFLVNVRAQGNGSTQVAVVGAN CCCCEEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEECC GQVDNSSDAQRIISLLHAQLN CCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]