| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is yaeL [C]
Identifier: 78066791
GI number: 78066791
Start: 2374567
End: 2375937
Strand: Reverse
Name: yaeL [C]
Synonym: Bcep18194_A5322
Alternate gene names: 78066791
Gene position: 2375937-2374567 (Counterclockwise)
Preceding gene: 78066792
Following gene: 78066790
Centisome position: 64.32
GC content: 65.86
Gene sequence:
>1371_bases ATGAACGTGCTGGTCGAACTGATCGCGTTTGCGGTGGCGATCGGGGTGCTGGTCGTCGTGCATGAGTACGGACACTATCG CGTCGCGCGCTGGTGCGGCGTGAAGGTGCTGCGTTTCTCGATCGGCTTCGGCCAGCCTGTCGCGCGCTGGGTCAGCCGCA GGACGGGCACCGAGTGGACGCTGTCGGCGCTGCCGCTCGGCGGCTACGTGAAGATGCTCGACGAGCGCGATCCCGGCCCC GGCATCCCGCCCGAGGAGCTCGGCCAGGCGTTCAACCGGCAGTCCGTCTACAAGCGCATCGCCATCGTCGCGGCGGGCCC GATTGCCAACTTCCTGTTGGCAATTGCGCTGTTTTCCATCGTATTTGCCACCGGTGTAACCGAGCCGACCGCGATCGTCG CACCGCCGGCCGCCGGCACGGTGGCGGCGCGCGCGGGCTTCGACGGCAACGAGAAGATCGTGTCGATCCGCAACGCGCAG GGCGGCGAGTCCGAACCGGTGCGATCGTGGTCGGACCTGCGCTGGAAGCTGCTGGCGGCTGCGTTCGACCACCGCGAGAT CGTGCTCGGCGCGCGCGACGGCAACACGACGTTCGATTTCCGCGTCGACCTCCGCAATGTTCCCGAAAGTCAGCTCGACG ACGATTTCATGGCCCATCTGGGCTTCGAGGCCGGCGGCGGCACGCTGTCGGTCGAGTCGGTGCAGCCCGGCAGCGCGGCG GAGCAGGCGGGCCTGAAGTCCGGCGACAAGCTGGTCGCGCTCGACGGCAAGCCGATCGGCGGCGCGTCACGCTTCATCGA TTTCGTGAAACACCATGCGGGCAAGCCGCTCGACCTGCAGATCGAGCGCAATGGCGCCGCACAGACGGTGTCAATCGTGC CGCAGATGCAGCGCGACGACGAATCGGGGCAGCAGATCGGCCGGATCGGCGCGGCGCTGTCGATGCATGCGCCGTCGGTC GACGTGCGATACGGGCCGATCGACAGCCTGCGGCTCGGCGCGCACCGCACGTGGGACATCTCCGTGTATTCGCTGAAGAT GTTCGGGCGCATGATCACGGGCAATGCGTCGCTGAAGAACCTGTCCGGCCCGGTGACGATCGCGGACTACGCGGGCAAGA GTGCGCGGCTCGGTCCGTCGGCGTTCCTGTCGTTCCTCGCCCTTGTCAGCATTAGCCTTGGCGTCCTGAACTTGTTGCCG ATTCCCGTTTTGGACGGGGGGCATCTGTTATATTATGCGGTTGAAGCCGCGACCGGGAAAGCCGTCTCGGAGCGCTGGCA GCTGATTCTGCAAAGAGCCGGGTTGATCTGCATCGTCGCATTGTCGGCGATCGCGCTGTTCAACGATCTGGCTCGGTTAA TCCATTTCTGA
Upstream 100 bases:
>100_bases ACGTCCTGGCGGCGGATGCCGAGGCACGCCGCCTCGCCGCCGAGATCATTGCGAAAGCGCCTGCGCCACGCGTGGAGCGC ACTGTCTGAATGGGGTGCTC
Downstream 100 bases:
>100_bases AGCGTCAGGCGGCGGCCGCTGGGCAGCCGCCTGATTTGATGCAGCTAAATATTGGGGATGCATGTTGTTCAAACCTCATC GCTTTGTACCTAAGACAGTT
Product: peptidase RseP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MNVLVELIAFAVAIGVLVVVHEYGHYRVARWCGVKVLRFSIGFGQPVARWVSRRTGTEWTLSALPLGGYVKMLDERDPGP GIPPEELGQAFNRQSVYKRIAIVAAGPIANFLLAIALFSIVFATGVTEPTAIVAPPAAGTVAARAGFDGNEKIVSIRNAQ GGESEPVRSWSDLRWKLLAAAFDHREIVLGARDGNTTFDFRVDLRNVPESQLDDDFMAHLGFEAGGGTLSVESVQPGSAA EQAGLKSGDKLVALDGKPIGGASRFIDFVKHHAGKPLDLQIERNGAAQTVSIVPQMQRDDESGQQIGRIGAALSMHAPSV DVRYGPIDSLRLGAHRTWDISVYSLKMFGRMITGNASLKNLSGPVTIADYAGKSARLGPSAFLSFLALVSISLGVLNLLP IPVLDGGHLLYYAVEAATGKAVSERWQLILQRAGLICIVALSAIALFNDLARLIHF
Sequences:
>Translated_456_residues MNVLVELIAFAVAIGVLVVVHEYGHYRVARWCGVKVLRFSIGFGQPVARWVSRRTGTEWTLSALPLGGYVKMLDERDPGP GIPPEELGQAFNRQSVYKRIAIVAAGPIANFLLAIALFSIVFATGVTEPTAIVAPPAAGTVAARAGFDGNEKIVSIRNAQ GGESEPVRSWSDLRWKLLAAAFDHREIVLGARDGNTTFDFRVDLRNVPESQLDDDFMAHLGFEAGGGTLSVESVQPGSAA EQAGLKSGDKLVALDGKPIGGASRFIDFVKHHAGKPLDLQIERNGAAQTVSIVPQMQRDDESGQQIGRIGAALSMHAPSV DVRYGPIDSLRLGAHRTWDISVYSLKMFGRMITGNASLKNLSGPVTIADYAGKSARLGPSAFLSFLALVSISLGVLNLLP IPVLDGGHLLYYAVEAATGKAVSERWQLILQRAGLICIVALSAIALFNDLARLIHF >Mature_456_residues MNVLVELIAFAVAIGVLVVVHEYGHYRVARWCGVKVLRFSIGFGQPVARWVSRRTGTEWTLSALPLGGYVKMLDERDPGP GIPPEELGQAFNRQSVYKRIAIVAAGPIANFLLAIALFSIVFATGVTEPTAIVAPPAAGTVAARAGFDGNEKIVSIRNAQ GGESEPVRSWSDLRWKLLAAAFDHREIVLGARDGNTTFDFRVDLRNVPESQLDDDFMAHLGFEAGGGTLSVESVQPGSAA EQAGLKSGDKLVALDGKPIGGASRFIDFVKHHAGKPLDLQIERNGAAQTVSIVPQMQRDDESGQQIGRIGAALSMHAPSV DVRYGPIDSLRLGAHRTWDISVYSLKMFGRMITGNASLKNLSGPVTIADYAGKSARLGPSAFLSFLALVSISLGVLNLLP IPVLDGGHLLYYAVEAATGKAVSERWQLILQRAGLICIVALSAIALFNDLARLIHF
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=465, Percent_Identity=40.8602150537634, Blast_Score=301, Evalue=8e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 48794; Mature: 48794
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLVELIAFAVAIGVLVVVHEYGHYRVARWCGVKVLRFSIGFGQPVARWVSRRTGTEWT CHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCEEEEEEECCCCCHHHHHHHHCCCCCEE LSALPLGGYVKMLDERDPGPGIPPEELGQAFNRQSVYKRIAIVAAGPIANFLLAIALFSI EEECCCCHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHEEECCHHHHHHHHHHHHHH VFATGVTEPTAIVAPPAAGTVAARAGFDGNEKIVSIRNAQGGESEPVRSWSDLRWKLLAA HHHHCCCCCCEEEECCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH AFDHREIVLGARDGNTTFDFRVDLRNVPESQLDDDFMAHLGFEAGGGTLSVESVQPGSAA HCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCHH EQAGLKSGDKLVALDGKPIGGASRFIDFVKHHAGKPLDLQIERNGAAQTVSIVPQMQRDD HHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHCCC ESGQQIGRIGAALSMHAPSVDVRYGPIDSLRLGAHRTWDISVYSLKMFGRMITGNASLKN HHHHHHHHHHHHHEECCCCCEEEECCCCCEEECCCCEEEEEEEEHHHHHHHHCCCCCCCC LSGPVTIADYAGKSARLGPSAFLSFLALVSISLGVLNLLPIPVLDGGHLLYYAVEAATGK CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEEHHCCH AVSERWQLILQRAGLICIVALSAIALFNDLARLIHF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVLVELIAFAVAIGVLVVVHEYGHYRVARWCGVKVLRFSIGFGQPVARWVSRRTGTEWT CHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCEEEEEEECCCCCHHHHHHHHCCCCCEE LSALPLGGYVKMLDERDPGPGIPPEELGQAFNRQSVYKRIAIVAAGPIANFLLAIALFSI EEECCCCHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHEEECCHHHHHHHHHHHHHH VFATGVTEPTAIVAPPAAGTVAARAGFDGNEKIVSIRNAQGGESEPVRSWSDLRWKLLAA HHHHCCCCCCEEEECCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH AFDHREIVLGARDGNTTFDFRVDLRNVPESQLDDDFMAHLGFEAGGGTLSVESVQPGSAA HCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCHH EQAGLKSGDKLVALDGKPIGGASRFIDFVKHHAGKPLDLQIERNGAAQTVSIVPQMQRDD HHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHCCC ESGQQIGRIGAALSMHAPSVDVRYGPIDSLRLGAHRTWDISVYSLKMFGRMITGNASLKN HHHHHHHHHHHHHEECCCCCEEEECCCCCEEECCCCEEEEEEEEHHHHHHHHCCCCCCCC LSGPVTIADYAGKSARLGPSAFLSFLALVSISLGVLNLLPIPVLDGGHLLYYAVEAATGK CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEEHHCCH AVSERWQLILQRAGLICIVALSAIALFNDLARLIHF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]