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The map label for this gene is omp85 [H]

Identifier: 78066790

GI number: 78066790

Start: 2372196

End: 2374505

Strand: Reverse

Name: omp85 [H]

Synonym: Bcep18194_A5321

Alternate gene names: 78066790

Gene position: 2374505-2372196 (Counterclockwise)

Preceding gene: 78066791

Following gene: 78066789

Centisome position: 64.28

GC content: 62.73

Gene sequence:

>2310_bases
ATGTTGTTCAAACCTCATCGCTTTGTACCTAAGACAGTTGCAGCGGCCGCGCTCGCCGCGCACGGCCTCGCGGCGCATGC
AGCGGCACCGTTCGTGGTGCAAGACATCAAGATCGAGGGGCTGCAGCGCGTCGAAGCGGGTTCGGTGTTCGCCTACCTGC
CGATCAAGCAGGGCGATACCTTCACGGACGACAAGGCATCCGAAGCAATCCGCGCGCTGTACGCGACGGGCTTCTTCAAC
GACGTACGCATCGCCACCCAGGGCAACGTCGTGATCGTGCAGGTGCAGGAGCGTCCGGCCATCGCGTCGATCGACTTCAC
CGGCACGAAGGAATTCGACAAGGACAACCTGACGAAGGCACTGCGCGCAGTCGGCCTCGCCGACGGCCGCTACTACGACA
AGGCGCTCGTCGACAAGGCGGAGCAGGAGCTCAAGCGCCAGTACCTCACGCGCGGCTTCTACGCGGCCGAGGTCAAGACG
ACGGTCACGCCGGTCGACGCGAACCGCGTGTCGATCCTGTTCGCGGTGGCCGAAGGTCCGAGCGCGAAGATCCGCCAGAT
CAACTTCATCGGCAACAAGGCGTTCAAGACGAGCACGCTGCGTGACGAGATGCAGCTGTCGACGCCGAACTGGTTCTCCT
GGTACACGAAGAACGACCTGTACTCGAAGGAAAAGCTCACGGGCGACCTCGAGGCGGTGCGCTCGTACTACCTGAACCGC
GGCTATCTCGAGTTCAACATCGATTCGACCCAGGTGTCGATCTCGCCCGACAAGAAGGACATGTACCTGACGGTCACGCT
GCACGAAGGCGAGCCGTACACGGTGTCGGGCATCAAGCTGTCGGGCAACCTGCTCGATCGCGAAGCCGAACTCAACAAGC
TGATCAAGATCAAGCCGGGTGATCGCTTCTCGGCCGAAAAGCTGCAACAGACCACCAAGTCGATCGTCGACAAGCTCGGT
GAGTACGGTTACGCATTCGCGACCGTCAACGCGCAGCCGGACATCGACCAGGCGAACCACAAGGTGAACCTGAACCTCGT
CGTCGATCCGAGCCGCCGTGTGTACGTGCGCCGCATCAACGTCGTCGGCAACACGCGTACGCGCGACGAAGTGGTGCGTC
GCGAAATGCGCCAGCTCGAAAGCTCGTGGTTCGATTCGAACCGCCTCGCGCTGTCGAAGGATCGCGTGAACCGTCTCGGC
TACTTCACCAACGTCGACGTGACGACGGTGCCGGTCGAAGGTACGAACGACCAGGTCGACGTGAACGTGAAGGTCGATGA
AAAGCCGACCGGCGCGATCACGCTGGGTGCCGGCTTCTCGTCGACGGACAAGGTCGTGCTGTCGGCCGGCGTGTCGCAGG
ACAACGTGTTCGGTTCGGGTACCAGCCTGTCGGTGAACGTCAACACCGCGAAGAGCTACCGTACGCTGACCGTCACGCAG
GTCGACCCGTACTTCACGGTCGACGGCATCAAGCGGATCACGGACGTCTACTACCGCACGTACCAGCCGCTCTACTATTC
GACGAGCTCGAGCTTCCGGATCATCAGCGCGGGCGGCAACCTGAAGTTCGGCATCCCATTCTCGGAAGTCGACACCGTCT
ACTTCGGCGCGGGCTTCGAGCAGAACCGCCTCGACGTCGATTCGAACACGCCGCAGAGCTACCAGGATTACGTGAACCAG
TTCGGCCGCGTGTCGAACACGGTGCCGCTGACGATCGCGTGGTCGCGTGACGCGCGTGACAGCGCGCTGATTCCGAGCCG
CGGCTACTTCACGCAGGCGAACATGGAGTACGGCGTGCCGGTCGGCAAGATCCAGTACTACAAGGCCGACCTGCAGGCCC
AGTACTACTATTCGTTCTCGCGCGGCTTCATCCTCGGCATGAACCTGCAGGGCGGCTACGGTAACGGTATCGGCAACCCG
TACCCGATCTTCAAGAACTACTACGCGGGCGGTATCGGCTCCGTGCGTGGCTACGAGCCGAGCTCGCTGGGCCCGCGCGA
CACGAAGACGAACGACCCGATCGGCGGTTCGAAGATGCTCGTCGGCAACATCGAACTGACGTTCCCGCTGCCGGGCACGG
GCTACGACCGCACGCTGCGCGTGTTCACGTTCCTCGACGGCGGTAACGTGTGGGGCAACGCGCCGGGCGGCACGAGTACG
GGCGCCAACGGCCTGCGTTACGGCTACGGTGTGGGTCTCGCGTGGATCTCGCCGATCGGCCCGCTGAAGCTGAGCCTCGG
CTTCCCGCTGCAGAAGCACGAAGGCGACCAGTACCAGAAATTCCAGTTCCAGATCGGGACGGCGTTCTGA

Upstream 100 bases:

>100_bases
GCGCTGTTCAACGATCTGGCTCGGTTAATCCATTTCTGAAGCGTCAGGCGGCGGCCGCTGGGCAGCCGCCTGATTTGATG
CAGCTAAATATTGGGGATGC

Downstream 100 bases:

>100_bases
CCGAACGCATGACAACAGCAACGAGAGGGTAATTTTGCTAACCGGTAAGTTTTCGAAACGAGTGATGTGCGCGCTGACCG
TTGCGCTGGCCTTGGGCGCG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFN
DVRIATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKALRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKT
TVTPVDANRVSILFAVAEGPSAKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
GYLEFNIDSTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPGDRFSAEKLQQTTKSIVDKLG
EYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLG
YFTNVDVTTVPVEGTNDQVDVNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
VDPYFTVDGIKRITDVYYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFEQNRLDVDSNTPQSYQDYVNQ
FGRVSNTVPLTIAWSRDARDSALIPSRGYFTQANMEYGVPVGKIQYYKADLQAQYYYSFSRGFILGMNLQGGYGNGIGNP
YPIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF

Sequences:

>Translated_769_residues
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFN
DVRIATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKALRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKT
TVTPVDANRVSILFAVAEGPSAKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
GYLEFNIDSTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPGDRFSAEKLQQTTKSIVDKLG
EYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLG
YFTNVDVTTVPVEGTNDQVDVNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
VDPYFTVDGIKRITDVYYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFEQNRLDVDSNTPQSYQDYVNQ
FGRVSNTVPLTIAWSRDARDSALIPSRGYFTQANMEYGVPVGKIQYYKADLQAQYYYSFSRGFILGMNLQGGYGNGIGNP
YPIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
>Mature_769_residues
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFN
DVRIATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKALRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKT
TVTPVDANRVSILFAVAEGPSAKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
GYLEFNIDSTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPGDRFSAEKLQQTTKSIVDKLG
EYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLG
YFTNVDVTTVPVEGTNDQVDVNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
VDPYFTVDGIKRITDVYYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFEQNRLDVDSNTPQSYQDYVNQ
FGRVSNTVPLTIAWSRDARDSALIPSRGYFTQANMEYGVPVGKIQYYKADLQAQYYYSFSRGFILGMNLQGGYGNGIGNP
YPIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=458, Percent_Identity=22.4890829694323, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI1786374, Length=817, Percent_Identity=36.3525091799266, Blast_Score=492, Evalue=1e-140,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 85067; Mature: 85067

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDT
CCCCCCCCCCHHHHHHHHHHHCHHHHCCCCEEEEEEEECCCEEECCCCEEEEEEECCCCC
FTDDKASEAIRALYATGFFNDVRIATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKA
CCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHH
LRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKTTVTPVDANRVSILFAVAEGP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCC
SAKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
CCEEEEEEEECCCCEECHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHCC
GYLEFNIDSTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPG
CEEEEEECCEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECCEECCCCCCCCEEEECCC
DRFSAEKLQQTTKSIVDKLGEYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRIN
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEE
VVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLGYFTNVDVTTVPVEGTNDQVD
EECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCEEECCCEEEEEECCCCCEEE
VNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
EEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEEEEECCCCEEEEEEEE
VDPYFTVDGIKRITDVYYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFE
ECCEEEHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEECCCHHHCCEEEEECCCC
QNRLDVDSNTPQSYQDYVNQFGRVSNTVPLTIAWSRDARDSALIPSRGYFTQANMEYGVP
CCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCEECCC
VGKIQYYKADLQAQYYYSFSRGFILGMNLQGGYGNGIGNPYPIFKNYYAGGIGSVRGYEP
CCEEEEEEECCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
SSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCCCCCCCC
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
CCCCCEECCCCCCCEECCCCCEEEEECCCHHCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDT
CCCCCCCCCCHHHHHHHHHHHCHHHHCCCCEEEEEEEECCCEEECCCCEEEEEEECCCCC
FTDDKASEAIRALYATGFFNDVRIATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKA
CCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHH
LRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKTTVTPVDANRVSILFAVAEGP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCC
SAKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
CCEEEEEEEECCCCEECHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHCC
GYLEFNIDSTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPG
CEEEEEECCEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECCEECCCCCCCCEEEECCC
DRFSAEKLQQTTKSIVDKLGEYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRIN
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEE
VVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLGYFTNVDVTTVPVEGTNDQVD
EECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCEEECCCEEEEEECCCCCEEE
VNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
EEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEEEEECCCCEEEEEEEE
VDPYFTVDGIKRITDVYYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFE
ECCEEEHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEECCCHHHCCEEEEECCCC
QNRLDVDSNTPQSYQDYVNQFGRVSNTVPLTIAWSRDARDSALIPSRGYFTQANMEYGVP
CCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCEECCC
VGKIQYYKADLQAQYYYSFSRGFILGMNLQGGYGNGIGNPYPIFKNYYAGGIGSVRGYEP
CCEEEEEEECCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
SSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCCCCCCCC
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
CCCCCEECCCCCCCEECCCCCEEEEECCCHHCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]