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The map label for this gene is yjgH [H]

Identifier: 78066742

GI number: 78066742

Start: 2329091

End: 2329495

Strand: Reverse

Name: yjgH [H]

Synonym: Bcep18194_A5273

Alternate gene names: 78066742

Gene position: 2329495-2329091 (Counterclockwise)

Preceding gene: 78066744

Following gene: 78066740

Centisome position: 63.06

GC content: 66.42

Gene sequence:

>405_bases
ATGGTAAAGCGTAGCGTGGTGTTTCCACCCGGTCGCCAGGCACTGTACGACCGCAACCGCTATTCGCCGGCAGTGCGCTC
GAACGGCTTCCTGTTCGTGTCCGGGCAGGTCGGCAGCCGCGAGGACGGCTCGCCCGAGCTGGAACTGGGCGCGCAGGTCC
GTCGCGCGTTCGACAACCTGAATGCGGTGCTGCGTGCGGCCGGCTGCACGTTCGACGACGTCGTCGACGTGACGGTGTTC
CTCGTCGATCCCGAAGCGACGTTCGAGCGGATCTGGGCGATCGTCCCCGAATACTGGGGCGACGCGCCGCATCCGACGCT
GACCGCCGTCGGCGTGACCTGGCTGTATGGGTTCCAGTTCGAAATCAAGGCGATCGCGCGGCTGCCGGAGACGGTTGACC
GTTGA

Upstream 100 bases:

>100_bases
TGGACAGGGTTGCCGGTTTATTCGCCGTGCAACGGACCTTAAAGTGCCTTCATCGTTGATGCCGGGGCGGATTCGCCCCA
CAAACCGAAGGAGGTAGGGG

Downstream 100 bases:

>100_bases
AGGGCGCTTGCGGTCCGTGGCGGTGCGCGTCACGGCGCGACCGGCGGCTCCTGTTCGTACGCGCGATGCAGCAGCGCGAC
GAACGATGACGAATCGGGCA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MVKRSVVFPPGRQALYDRNRYSPAVRSNGFLFVSGQVGSREDGSPELELGAQVRRAFDNLNAVLRAAGCTFDDVVDVTVF
LVDPEATFERIWAIVPEYWGDAPHPTLTAVGVTWLYGFQFEIKAIARLPETVDR

Sequences:

>Translated_134_residues
MVKRSVVFPPGRQALYDRNRYSPAVRSNGFLFVSGQVGSREDGSPELELGAQVRRAFDNLNAVLRAAGCTFDDVVDVTVF
LVDPEATFERIWAIVPEYWGDAPHPTLTAVGVTWLYGFQFEIKAIARLPETVDR
>Mature_134_residues
MVKRSVVFPPGRQALYDRNRYSPAVRSNGFLFVSGQVGSREDGSPELELGAQVRRAFDNLNAVLRAAGCTFDDVVDVTVF
LVDPEATFERIWAIVPEYWGDAPHPTLTAVGVTWLYGFQFEIKAIARLPETVDR

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=130, Percent_Identity=62.3076923076923, Blast_Score=167, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14962; Mature: 14962

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRSVVFPPGRQALYDRNRYSPAVRSNGFLFVSGQVGSREDGSPELELGAQVRRAFDNL
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
NAVLRAAGCTFDDVVDVTVFLVDPEATFERIWAIVPEYWGDAPHPTLTAVGVTWLYGFQF
HHHHHHCCCCHHHCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHH
EIKAIARLPETVDR
HHHHHHHCHHHHCC
>Mature Secondary Structure
MVKRSVVFPPGRQALYDRNRYSPAVRSNGFLFVSGQVGSREDGSPELELGAQVRRAFDNL
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
NAVLRAAGCTFDDVVDVTVFLVDPEATFERIWAIVPEYWGDAPHPTLTAVGVTWLYGFQF
HHHHHHCCCCHHHCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHH
EIKAIARLPETVDR
HHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]