| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is serB [C]
Identifier: 78066546
GI number: 78066546
Start: 2115455
End: 2116300
Strand: Direct
Name: serB [C]
Synonym: Bcep18194_A5077
Alternate gene names: 78066546
Gene position: 2115455-2116300 (Clockwise)
Preceding gene: 78066545
Following gene: 78066552
Centisome position: 57.27
GC content: 67.02
Gene sequence:
>846_bases ATGACCCACAACCTCGTCATCCAGAGTCTTGCGCCGCTGTCGGACGCCCATCACAAACCGCTGCTCGCGCTGTCGCGCGG CACCCGCATCGTGCAGACCGACGATCACGCGCTGCGGATCGACAACGCGAACCCGGCGCAGCGCCTCGATATCGATGCGT ACTGCGGCACGCACGCGCTCGACTTCGCGTTCGTCGAGGCCGGCCTCTCGCTCGGCGATTTCGGGCTCGCCGTGATGGAC ATGGATTCGACGCTGATCACGATCGAGTGCATCGACGAGATCGCCGATTTCTGCGGGCTGAAAACGCAGGTCGCCGAGAT CACCGAAGCGTCGATGCGCGGCGAGATCCGCGACTTCAACGAAAGCCTCACGCGCCGCGTCGCGCTGCTGGCCGGGCTCG ACGCGCACGCGCTCGAACGCGTGTACGAGGAGCGGCTGCAACTGACGCCGGGCGCCGAGAAAATGCTCGCCGGCGTGAAG GCTGCCGGCATGAAGACGCTGCTCGTGTCGGGCGGCTTCACGTTCTTCACCGAGCGACTGAAGACACGCCTCGGCCTCGA CTACGCGCATGCGAACACGCTCGAGATCGTCGACGGCAAGCTGACCGGCAAGGTGCTCGGCGAGATCGTGAACGCCGACG TGAAGGCGCGCCTGCTGCGCGAGACGTGCGCGTCGCTCGGCCTCGAGCCGCGCCGTGCGATCGCGATGGGCGACGGGTCG AACGACCTGAAGATGATGGCCGAAGCCGGGCTGTCGGTCGCGTACCACGCGAAGCCCGTCGTACGCGACGCGGCGACGGT CGCGTTCGATCATGTCGGCCTCGACGGGCTGCTGCGCCTGTTCTGA
Upstream 100 bases:
>100_bases CGTTCGCCACGCAAGGGCCCGACGCCGGACGGGGCCCGCATCGGCAGGCGGCTGCCCGTTGGCCGCATACGCATTTCATT CGCCTCCCAACCATCCCGTC
Downstream 100 bases:
>100_bases TCCTGCAGAATCCGAAATGAAAAACGCCGGTGCGATGCAACATCGCGCCGGCGTTTTGTTTTTCCGCGGAGCCTTCGCGG CCTGCGATCAGCCGAGTACG
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTHNLVIQSLAPLSDAHHKPLLALSRGTRIVQTDDHALRIDNANPAQRLDIDAYCGTHALDFAFVEAGLSLGDFGLAVMD MDSTLITIECIDEIADFCGLKTQVAEITEASMRGEIRDFNESLTRRVALLAGLDAHALERVYEERLQLTPGAEKMLAGVK AAGMKTLLVSGGFTFFTERLKTRLGLDYAHANTLEIVDGKLTGKVLGEIVNADVKARLLRETCASLGLEPRRAIAMGDGS NDLKMMAEAGLSVAYHAKPVVRDAATVAFDHVGLDGLLRLF
Sequences:
>Translated_281_residues MTHNLVIQSLAPLSDAHHKPLLALSRGTRIVQTDDHALRIDNANPAQRLDIDAYCGTHALDFAFVEAGLSLGDFGLAVMD MDSTLITIECIDEIADFCGLKTQVAEITEASMRGEIRDFNESLTRRVALLAGLDAHALERVYEERLQLTPGAEKMLAGVK AAGMKTLLVSGGFTFFTERLKTRLGLDYAHANTLEIVDGKLTGKVLGEIVNADVKARLLRETCASLGLEPRRAIAMGDGS NDLKMMAEAGLSVAYHAKPVVRDAATVAFDHVGLDGLLRLF >Mature_280_residues THNLVIQSLAPLSDAHHKPLLALSRGTRIVQTDDHALRIDNANPAQRLDIDAYCGTHALDFAFVEAGLSLGDFGLAVMDM DSTLITIECIDEIADFCGLKTQVAEITEASMRGEIRDFNESLTRRVALLAGLDAHALERVYEERLQLTPGAEKMLAGVKA AGMKTLLVSGGFTFFTERLKTRLGLDYAHANTLEIVDGKLTGKVLGEIVNADVKARLLRETCASLGLEPRRAIAMGDGSN DLKMMAEAGLSVAYHAKPVVRDAATVAFDHVGLDGLLRLF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=184, Percent_Identity=27.1739130434783, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1790849, Length=204, Percent_Identity=49.0196078431373, Blast_Score=181, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6321647, Length=207, Percent_Identity=40.5797101449275, Blast_Score=145, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 30371; Mature: 30240
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHNLVIQSLAPLSDAHHKPLLALSRGTRIVQTDDHALRIDNANPAQRLDIDAYCGTHAL CCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCEEEECCCCCHHHEEEHHHCCCHHH DFAFVEAGLSLGDFGLAVMDMDSTLITIECIDEIADFCGLKTQVAEITEASMRGEIRDFN HHHHHHHCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH ESLTRRVALLAGLDAHALERVYEERLQLTPGAEKMLAGVKAAGMKTLLVSGGFTFFTERL HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHH KTRLGLDYAHANTLEIVDGKLTGKVLGEIVNADVKARLLRETCASLGLEPRRAIAMGDGS HHHHCCCHHCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCC NDLKMMAEAGLSVAYHAKPVVRDAATVAFDHVGLDGLLRLF CHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure THNLVIQSLAPLSDAHHKPLLALSRGTRIVQTDDHALRIDNANPAQRLDIDAYCGTHAL CCHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCEEEECCCCCHHHEEEHHHCCCHHH DFAFVEAGLSLGDFGLAVMDMDSTLITIECIDEIADFCGLKTQVAEITEASMRGEIRDFN HHHHHHHCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH ESLTRRVALLAGLDAHALERVYEERLQLTPGAEKMLAGVKAAGMKTLLVSGGFTFFTERL HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHH KTRLGLDYAHANTLEIVDGKLTGKVLGEIVNADVKARLLRETCASLGLEPRRAIAMGDGS HHHHCCCHHCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCC NDLKMMAEAGLSVAYHAKPVVRDAATVAFDHVGLDGLLRLF CHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]