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The map label for this gene is ybbM [C]

Identifier: 78066541

GI number: 78066541

Start: 2110923

End: 2111726

Strand: Direct

Name: ybbM [C]

Synonym: Bcep18194_A5072

Alternate gene names: 78066541

Gene position: 2110923-2111726 (Clockwise)

Preceding gene: 78066540

Following gene: 78066545

Centisome position: 57.14

GC content: 68.66

Gene sequence:

>804_bases
ATGAGCCCCACACTGCAGGACCTGAGCCTCGTCGACGTCGGCATCGCCGCCGCGCTCGTCGCGGTCAACGGCGCGATCTC
GATGGCCCTGTCGCTCGGCCTCGGCCGCAAGCTCGCGCTCGCGGCCGTGCGCACCGTCGTGCAGTTGCTCGCGATCGGCT
ACGTGCTCGGCTGGGTATTCGGCCATCCTCACTGGTACGTCGTGCTGCCGCTCACCGCACTGATGACGCTGATCGCCGGT
TTCGCCGGCGCGGGGCGCGGCAAGCGCACGTATCGCGGCCAGCGCATCGACAGCATTGCGTCGATCTGGTTCAGCAGCTG
GTTCGTCGCGGCGGTCGGCCTGTTCGTCGTGATCCGCATCCATCCGTGGTACGCACCGCAATACGCGATTCCGATCCTCG
GGATGATTCTCGGCAATACGCTCACGGGCGTGTCGCTCGGCGTCGAACGGATGATGGAAGAACTCACGGCGCGCCGCGAC
CGTGTCGAGACCGCACTCGCGCTCGGCGCGACGCGCTGGGAAGCCGCGCAGGACGCCGCACGCCAGGCCGTGCGCGCCGG
CATGCTGCCGACGCTGAACCAGATGGCCGTCGTCGGCGTCGTGAGCCTGCCGGGGATGATGACGGGCCAGGTGCTGGCCG
GCCAATCGCCGCTGCAGGCCGTGCGTTACCAGATCGTGATCATGTTCCTGATTGCCGCGGCCTCCGCGCTCGGCACGGTC
GGCGCGGTGCTGATGACCTATCGCCGGCTGTTCTCGCCCGATCACCGCTTTCTCGCAGCGCGGCTCGAAGAACGCGCGCA
CTGA

Upstream 100 bases:

>100_bases
GGATCTCGCACGATCCGGCCCAGGCCGCGCGGATCGGCACGATGCGGCTCGTGATGCAGGCCGGCGTGATGCACGTTGCC
AAGCCGACGGAGGCAACGCA

Downstream 100 bases:

>100_bases
CATGCCGCGTCACCGCGCGATGCATTCGCGCGGTTCGCCAGTCAGCGCACGCTGCGGCGCTTGCCGAGCGCCTGCCGCAA
CGCGGCCGCGATGTCCGCGT

Product: putative ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSPTLQDLSLVDVGIAAALVAVNGAISMALSLGLGRKLALAAVRTVVQLLAIGYVLGWVFGHPHWYVVLPLTALMTLIAG
FAGAGRGKRTYRGQRIDSIASIWFSSWFVAAVGLFVVIRIHPWYAPQYAIPILGMILGNTLTGVSLGVERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLMTYRRLFSPDHRFLAARLEERAH

Sequences:

>Translated_267_residues
MSPTLQDLSLVDVGIAAALVAVNGAISMALSLGLGRKLALAAVRTVVQLLAIGYVLGWVFGHPHWYVVLPLTALMTLIAG
FAGAGRGKRTYRGQRIDSIASIWFSSWFVAAVGLFVVIRIHPWYAPQYAIPILGMILGNTLTGVSLGVERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLMTYRRLFSPDHRFLAARLEERAH
>Mature_266_residues
SPTLQDLSLVDVGIAAALVAVNGAISMALSLGLGRKLALAAVRTVVQLLAIGYVLGWVFGHPHWYVVLPLTALMTLIAGF
AGAGRGKRTYRGQRIDSIASIWFSSWFVAAVGLFVVIRIHPWYAPQYAIPILGMILGNTLTGVSLGVERMMEELTARRDR
VETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTVG
AVLMTYRRLFSPDHRFLAARLEERAH

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=259, Percent_Identity=30.1158301158301, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28663; Mature: 28532

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SPTLQDLSLVDVGIAAALVAVNGAISMALSLGLGRKLALAAVRTVVQLLAIGYVLGWVF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GHPHWYVVLPLTALMTLIAGFAGAGRGKRTYRGQRIDSIASIWFSSWFVAAVGLFVVIRI
CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPWYAPQYAIPILGMILGNTLTGVSLGVERMMEELTARRDRVETALALGATRWEAAQDAA
CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
HHHHHHCCCCCHHHHHHHHHHHCCCHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAVLMTYRRLFSPDHRFLAARLEERAH
HHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]