| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066531
Identifier: 78066531
GI number: 78066531
Start: 2099769
End: 2100458
Strand: Direct
Name: 78066531
Synonym: Bcep18194_A5062
Alternate gene names: NA
Gene position: 2099769-2100458 (Clockwise)
Preceding gene: 78066529
Following gene: 78066538
Centisome position: 56.84
GC content: 66.52
Gene sequence:
>690_bases ATGTCAGAGCGTCCCTCGGCCCGCATGCGGGACATCAATATCGAATGGCTGACGCGCGCTGCCGAATTCGACCATCTGTT CCAGACGCGCTGGCTCGGCGAGCGCTTCTTCCACCTGCCCGGCGACATGCTCGCGCTCCAGGAACTGATCTGGCGCGAGC GTCCCGACTGCATCGTGCAGACCGGCATCGCGGCAGGCGGCGGCGTCGTATTCTCCGCGTCGATGCTGGAACTGGCCGGC GACAGCGGCCGGGTCATCGCGATCGAGCCGCGCCTGCGCGACGAGGTCAGGCAGCGCCTGCAATCGCACCGCCTCGCCCA CCGCATGACGCTGATCGAAGGCGAATCGTGCGCGGCCGACACGCTCGCGTCGGTGCGCACACAGATCGATGACGGCGCGC GCGTGATGGCGATCCTCGATCTCACGCACACCCACGCGCACGTGCTGCGCGAACTCGAATGCTATGCGCCGCTCGTGACG CCCGGCAGCTACGCGATCGTGATGGATACCATCATGGAGTACCTGCCCGCGTCGATGTTCGACGGCAAGCCGTACGGCAA AGGCAACAACCCGGCCACCGCCGCGCATGAATTCCTGGCCCGCGACGACCGGTTCGAGGTCGACTACGACATCGAGGACC GCGTCCTCATGACGCTGTCGCCAGGCGGTTTCCTGAAGCGAGTGCGCTGA
Upstream 100 bases:
>100_bases GCCCGACGCCAGCGCCTGCAGGCGCGCCGGCTCGATGTTCCAGTACCGGTGAAGCCACGGTTCCAGCGTTTTCACGTCAC TCCTACTCGTTGCATTGACC
Downstream 100 bases:
>100_bases TCAGGCGCGCGGCCTCGGCAGAACCGTTGCGCGATGCATAGCTCGTGCGGATCCGCGCCGCCCGCTCGCGCAACGTCCCG GGCCGCAACAGGCGTTCGAG
Product: cephalosporin hydroxylase
Products: NA
Alternate protein names: Cephalosporin Hydroxylase Family Protein; Cephalosporin Protein; Preprotein Translocase ATPase Subunit; Cephalosporin Hydroxylase Cmci
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSERPSARMRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQTGIAAGGGVVFSASMLELAG DSGRVIAIEPRLRDEVRQRLQSHRLAHRMTLIEGESCAADTLASVRTQIDDGARVMAILDLTHTHAHVLRELECYAPLVT PGSYAIVMDTIMEYLPASMFDGKPYGKGNNPATAAHEFLARDDRFEVDYDIEDRVLMTLSPGGFLKRVR
Sequences:
>Translated_229_residues MSERPSARMRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQTGIAAGGGVVFSASMLELAG DSGRVIAIEPRLRDEVRQRLQSHRLAHRMTLIEGESCAADTLASVRTQIDDGARVMAILDLTHTHAHVLRELECYAPLVT PGSYAIVMDTIMEYLPASMFDGKPYGKGNNPATAAHEFLARDDRFEVDYDIEDRVLMTLSPGGFLKRVR >Mature_228_residues SERPSARMRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQTGIAAGGGVVFSASMLELAGD SGRVIAIEPRLRDEVRQRLQSHRLAHRMTLIEGESCAADTLASVRTQIDDGARVMAILDLTHTHAHVLRELECYAPLVTP GSYAIVMDTIMEYLPASMFDGKPYGKGNNPATAAHEFLARDDRFEVDYDIEDRVLMTLSPGGFLKRVR
Specific function: Unknown
COG id: COG3510
COG function: function code V; Cephalosporin hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25841; Mature: 25710
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERPSARMRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQ CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE TGIAAGGGVVFSASMLELAGDSGRVIAIEPRLRDEVRQRLQSHRLAHRMTLIEGESCAAD CCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCHHHH TLASVRTQIDDGARVMAILDLTHTHAHVLRELECYAPLVTPGSYAIVMDTIMEYLPASMF HHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHCHHHC DGKPYGKGNNPATAAHEFLARDDRFEVDYDIEDRVLMTLSPGGFLKRVR CCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEECCCHHHHCCC >Mature Secondary Structure SERPSARMRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQ CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE TGIAAGGGVVFSASMLELAGDSGRVIAIEPRLRDEVRQRLQSHRLAHRMTLIEGESCAAD CCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCHHHH TLASVRTQIDDGARVMAILDLTHTHAHVLRELECYAPLVTPGSYAIVMDTIMEYLPASMF HHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHCHHHC DGKPYGKGNNPATAAHEFLARDDRFEVDYDIEDRVLMTLSPGGFLKRVR CCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEECCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA