| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yeiH [C]
Identifier: 78066501
GI number: 78066501
Start: 2066231
End: 2067298
Strand: Direct
Name: yeiH [C]
Synonym: Bcep18194_A5032
Alternate gene names: 78066501
Gene position: 2066231-2067298 (Clockwise)
Preceding gene: 78066492
Following gene: 78066502
Centisome position: 55.93
GC content: 68.63
Gene sequence:
>1068_bases ATGTCCACTGCTCCGACTCCCCATCTCAGCCCCGCCGCGCCGTCGATGCGCGGCCAGTTGAACGGCGTGCTGTTTGTCGC GCTGTTCGCCGCCGCCGTCACGAGCCTGTCCCAGCTTCCCGCGATCGCGGGGCTCGGCCTGTCGCCGCTGATCGTCGGCA TCGTCGCCGGTGCGCTGTACGGCAATGCGCTGCGCGACGGCATGCCGGCCAGCTGGGCGGCCGGCGTCAACTTCTCCGCC CGCAAGCTGCTGCGCATCGCGGTCGCGTTCTTCGGGTTGCGCGTCAGCCTGCAGGAAATCGCGCAGGTCGGCCTGCCGGG CCTGACGGTGTCGGTACTGGTCGTGGTCAGCACGCTCGTGATCGGTACCTGGGCCGGCATGAAGATCATGAAGCTCGACC GCGATTCGGCCCTGCTGACCGCCGCCGGCAGCGCGATCTGCGGCGCGGCCGCCGTGCTCGCGTTCGAATCGACGCTGCAG TCGAAGCCGCACCAGAGCGCAATGGCAGTCGGTAGCGTCGTGCTGTTCGGCACGCTGTCGATGTTCCTGTACCCGATCGC GTATCACGCCGGGCTGCTGAACCTCGATCCTGCCGGCCTCGGCCTGTTCTTCGGCGGCACGATCCACGAGGTCGCGCAGG TGGTCGGCGCGGCGAGCGACATCAGCCCGCAGGTCGCGCACATCGCGACGATCGTCAAGATGACCCGCGTGATGCTGCTG GTGCCGGTGCTGCTGGTGCTCGGCTGGTGGCTGGCCCGCTCGGCACGTGCGACCGCCGGCGGCGCGCAAGGCAAGCGCAA GGTGGCCGTGCCCTGGTTCGCACTCGGTTTCCTCGGCTTCGTGATCGTCAATTCGCTGAACGTGCTGCCCACCGACGTCA CCCACACGCTGAACGTGCTCGACACCTTCGCGCTGACGATGGCCATGACCGCACTCGGCATCGAAACCCGCGTCGCGCAG ATCCGTGCAGCCGGCCCCCGTGCGCTGATGACCGGCCTGATCCTGTACGTGTGGCTGATCGCCGGCGGTTACGGGATCAC CTGGGCCGTGCAGCACTGGCTTGGCTGA
Upstream 100 bases:
>100_bases TCGGCTTTCCGGATAGTTTACGTCACAAATCACAATTTTTCATATCGATATAACGAAATTAGGATTACACCATCGCAACA CGCTCCATCACGGTGCTTCC
Downstream 100 bases:
>100_bases GTTGCCCGCCCGTGACACTTCGCGCGCCGCGCCCGACGGGATGGTCCCGCGGGCGCGGCGCAGTGCTATGCTTCGCGTCG TTTTCCATCGCCCTCTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSTAPTPHLSPAAPSMRGQLNGVLFVALFAAAVTSLSQLPAIAGLGLSPLIVGIVAGALYGNALRDGMPASWAAGVNFSA RKLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLVIGTWAGMKIMKLDRDSALLTAAGSAICGAAAVLAFESTLQ SKPHQSAMAVGSVVLFGTLSMFLYPIAYHAGLLNLDPAGLGLFFGGTIHEVAQVVGAASDISPQVAHIATIVKMTRVMLL VPVLLVLGWWLARSARATAGGAQGKRKVAVPWFALGFLGFVIVNSLNVLPTDVTHTLNVLDTFALTMAMTALGIETRVAQ IRAAGPRALMTGLILYVWLIAGGYGITWAVQHWLG
Sequences:
>Translated_355_residues MSTAPTPHLSPAAPSMRGQLNGVLFVALFAAAVTSLSQLPAIAGLGLSPLIVGIVAGALYGNALRDGMPASWAAGVNFSA RKLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLVIGTWAGMKIMKLDRDSALLTAAGSAICGAAAVLAFESTLQ SKPHQSAMAVGSVVLFGTLSMFLYPIAYHAGLLNLDPAGLGLFFGGTIHEVAQVVGAASDISPQVAHIATIVKMTRVMLL VPVLLVLGWWLARSARATAGGAQGKRKVAVPWFALGFLGFVIVNSLNVLPTDVTHTLNVLDTFALTMAMTALGIETRVAQ IRAAGPRALMTGLILYVWLIAGGYGITWAVQHWLG >Mature_354_residues STAPTPHLSPAAPSMRGQLNGVLFVALFAAAVTSLSQLPAIAGLGLSPLIVGIVAGALYGNALRDGMPASWAAGVNFSAR KLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLVIGTWAGMKIMKLDRDSALLTAAGSAICGAAAVLAFESTLQS KPHQSAMAVGSVVLFGTLSMFLYPIAYHAGLLNLDPAGLGLFFGGTIHEVAQVVGAASDISPQVAHIATIVKMTRVMLLV PVLLVLGWWLARSARATAGGAQGKRKVAVPWFALGFLGFVIVNSLNVLPTDVTHTLNVLDTFALTMAMTALGIETRVAQI RAAGPRALMTGLILYVWLIAGGYGITWAVQHWLG
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=314, Percent_Identity=40.1273885350318, Blast_Score=227, Evalue=1e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004630 - InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36811; Mature: 36680
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAPTPHLSPAAPSMRGQLNGVLFVALFAAAVTSLSQLPAIAGLGLSPLIVGIVAGALY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GNALRDGMPASWAAGVNFSARKLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLV HHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IGTWAGMKIMKLDRDSALLTAAGSAICGAAAVLAFESTLQSKPHQSAMAVGSVVLFGTLS HHHHCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MFLYPIAYHAGLLNLDPAGLGLFFGGTIHEVAQVVGAASDISPQVAHIATIVKMTRVMLL HHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VPVLLVLGWWLARSARATAGGAQGKRKVAVPWFALGFLGFVIVNSLNVLPTDVTHTLNVL HHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH DTFALTMAMTALGIETRVAQIRAAGPRALMTGLILYVWLIAGGYGITWAVQHWLG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure STAPTPHLSPAAPSMRGQLNGVLFVALFAAAVTSLSQLPAIAGLGLSPLIVGIVAGALY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GNALRDGMPASWAAGVNFSARKLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLV HHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IGTWAGMKIMKLDRDSALLTAAGSAICGAAAVLAFESTLQSKPHQSAMAVGSVVLFGTLS HHHHCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MFLYPIAYHAGLLNLDPAGLGLFFGGTIHEVAQVVGAASDISPQVAHIATIVKMTRVMLL HHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VPVLLVLGWWLARSARATAGGAQGKRKVAVPWFALGFLGFVIVNSLNVLPTDVTHTLNVL HHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH DTFALTMAMTALGIETRVAQIRAAGPRALMTGLILYVWLIAGGYGITWAVQHWLG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]