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The map label for this gene is yeeY [H]

Identifier: 78066442

GI number: 78066442

Start: 2001605

End: 2002543

Strand: Reverse

Name: yeeY [H]

Synonym: Bcep18194_A4973

Alternate gene names: 78066442

Gene position: 2002543-2001605 (Counterclockwise)

Preceding gene: 78066446

Following gene: 78066440

Centisome position: 54.21

GC content: 61.24

Gene sequence:

>939_bases
ATGACGGTTGGACGCACCCCTTGCTTGGAATCCGTTATGAGGCTGTCATTCGACGCGCTCGAGGTGTTGGACGCAATTGA
CCGGACCGGCACTTTTGCCGAGGCCGCCGAACTTCTGCACCGAGTGCCATCCGCCTTGAGCTACATCGTGCAGAAACTTG
AAAGCGATCTCGGCGTCGCACTGTTCGATCGAAGTGGCAGGCGCGCGAAGCTCACACATGCAGGATGCGTCGTTGTCGAG
GAAGGCCGTCGGCTCTTGCGTGCCGCAGAGCAGCTCGAACTGAAAGCTCGACGCGTTCAAGAAGGCTGGGAAACGGAGTT
GCGAATCTGCGTTGATGAGATCCTCCCATTCGCTGCACTCTGGCCTTACATACGTGCGTTCTACGCGCTCGAAATGGATA
CGCAGTTGCGCCTGTCGACCGAAGTGCTTGGCGGGACCTGGGACGCATTGATTTCACGTCGCGCAGATCTCGTCGTCGGC
GCCGCCGGCGAGCCACCAGTCTTACCGAATATCGTCGCGCACGAGATCGGTACGTTGAGGCACGTCTTCGTCGTCGCACC
CAACCACCCTCTCGCCACGTTGCCTGAGCCGCTTTCGATGACTACGGTCATCCAGCATCGTGGTGCAGTTATCAGCGACA
CGTCGCGCGAATCGCAGCCGCGCTCCGCCGCCATTGACGCCGGCCAACCGTATCTCGCGGTACCAACCCTCGCTGCAAAA
TTAGCCGCTCAATGCGAGGGGCTCGCGGTCGGGACGTTGCCGGAGTGTGTTGCGGCACGTGCGATCGCGGATGGCAAGCT
TGTCGCGCGCGAGGTGACGGGGATGCGTGTCACTACTCAGTGCTATCTCGCATGGCGCAACGACGAGGCCGGGCGTGCGT
TGCACTGGTGGGCCGATCAACTCAACCACGCCGACCTGGTCGACCGCTTTACCCACTGA

Upstream 100 bases:

>100_bases
TACGGCCAAGCCCGAAGCCTCAAATGCTCAATGTTTTATCAGTGGATTTATAGCTTAAATGTTCTAAAGAAAGCGCCACG
GTACGCTACGTGACGATAGC

Downstream 100 bases:

>100_bases
TCTCGTCACGCGATCCACCAGGCATCGAGCGTACCGCGAGTGGCCGGCACGGCATACACGGGTTGAGCGAACTTGATCCG
CAATTCCTCGAGTTGCGCGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTVGRTPCLESVMRLSFDALEVLDAIDRTGTFAEAAELLHRVPSALSYIVQKLESDLGVALFDRSGRRAKLTHAGCVVVE
EGRRLLRAAEQLELKARRVQEGWETELRICVDEILPFAALWPYIRAFYALEMDTQLRLSTEVLGGTWDALISRRADLVVG
AAGEPPVLPNIVAHEIGTLRHVFVVAPNHPLATLPEPLSMTTVIQHRGAVISDTSRESQPRSAAIDAGQPYLAVPTLAAK
LAAQCEGLAVGTLPECVAARAIADGKLVAREVTGMRVTTQCYLAWRNDEAGRALHWWADQLNHADLVDRFTH

Sequences:

>Translated_312_residues
MTVGRTPCLESVMRLSFDALEVLDAIDRTGTFAEAAELLHRVPSALSYIVQKLESDLGVALFDRSGRRAKLTHAGCVVVE
EGRRLLRAAEQLELKARRVQEGWETELRICVDEILPFAALWPYIRAFYALEMDTQLRLSTEVLGGTWDALISRRADLVVG
AAGEPPVLPNIVAHEIGTLRHVFVVAPNHPLATLPEPLSMTTVIQHRGAVISDTSRESQPRSAAIDAGQPYLAVPTLAAK
LAAQCEGLAVGTLPECVAARAIADGKLVAREVTGMRVTTQCYLAWRNDEAGRALHWWADQLNHADLVDRFTH
>Mature_311_residues
TVGRTPCLESVMRLSFDALEVLDAIDRTGTFAEAAELLHRVPSALSYIVQKLESDLGVALFDRSGRRAKLTHAGCVVVEE
GRRLLRAAEQLELKARRVQEGWETELRICVDEILPFAALWPYIRAFYALEMDTQLRLSTEVLGGTWDALISRRADLVVGA
AGEPPVLPNIVAHEIGTLRHVFVVAPNHPLATLPEPLSMTTVIQHRGAVISDTSRESQPRSAAIDAGQPYLAVPTLAAKL
AAQCEGLAVGTLPECVAARAIADGKLVAREVTGMRVTTQCYLAWRNDEAGRALHWWADQLNHADLVDRFTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=289, Percent_Identity=40.4844290657439, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1789492, Length=284, Percent_Identity=42.2535211267606, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1787949, Length=291, Percent_Identity=33.6769759450172, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1786508, Length=275, Percent_Identity=29.0909090909091, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786713, Length=299, Percent_Identity=29.4314381270903, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI157672245, Length=168, Percent_Identity=34.5238095238095, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34196; Mature: 34064

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGRTPCLESVMRLSFDALEVLDAIDRTGTFAEAAELLHRVPSALSYIVQKLESDLGVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LFDRSGRRAKLTHAGCVVVEEGRRLLRAAEQLELKARRVQEGWETELRICVDEILPFAAL
EECCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
WPYIRAFYALEMDTQLRLSTEVLGGTWDALISRRADLVVGAAGEPPVLPNIVAHEIGTLR
HHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCEE
HVFVVAPNHPLATLPEPLSMTTVIQHRGAVISDTSRESQPRSAAIDAGQPYLAVPTLAAK
EEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEHHHHHHH
LAAQCEGLAVGTLPECVAARAIADGKLVAREVTGMRVTTQCYLAWRNDEAGRALHWWADQ
HHHHHCCCEECCCHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHH
LNHADLVDRFTH
CCHHHHHHHHCC
>Mature Secondary Structure 
TVGRTPCLESVMRLSFDALEVLDAIDRTGTFAEAAELLHRVPSALSYIVQKLESDLGVA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LFDRSGRRAKLTHAGCVVVEEGRRLLRAAEQLELKARRVQEGWETELRICVDEILPFAAL
EECCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
WPYIRAFYALEMDTQLRLSTEVLGGTWDALISRRADLVVGAAGEPPVLPNIVAHEIGTLR
HHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCEE
HVFVVAPNHPLATLPEPLSMTTVIQHRGAVISDTSRESQPRSAAIDAGQPYLAVPTLAAK
EEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEHHHHHHH
LAAQCEGLAVGTLPECVAARAIADGKLVAREVTGMRVTTQCYLAWRNDEAGRALHWWADQ
HHHHHCCCEECCCHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHH
LNHADLVDRFTH
CCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]