Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78066446

Identifier: 78066446

GI number: 78066446

Start: 2006123

End: 2006644

Strand: Reverse

Name: 78066446

Synonym: Bcep18194_A4977

Alternate gene names: NA

Gene position: 2006644-2006123 (Counterclockwise)

Preceding gene: 78066447

Following gene: 78066442

Centisome position: 54.32

GC content: 60.34

Gene sequence:

>522_bases
ATGACTGACAAACTTTCCGCGCCTTTCGTCATCGAGCGCCGCTTCGCTGCGCCGCGTGAACTCGTATACGCCGCGTTGAC
CGAAGCTGAGCACTTGAGTACGTGGATGAGTCCACCCGGGATGGAAATGTCTCACTGCACAGTGGATGCGCGTGTCGGTG
GCGTCTTTCACTACGCGATGAAACCGCGCGGCGTGCCCGACGCTCCCGCTATGTGGGGCAAGTGGACGTTCCGCGAATTG
ACGCCCCCTACGCGTATTGTTGTCGTCGTGCAGTTTAGTGATGCCGAAGGCGGAGTGACGCGACATCCGATGTCCGCGCA
ATGGCCGCTTTATACGCTTTCGACGACGACGCTCAGCGAAGTCGAGGGTGGCACATTAATGCACCTTGAGTGGCGCGCGC
TCGACGCCGGTGAAGCAGAGGAAGCCACCTTCGACGCGTCGCACGCCAGCATGTCTCAAGGTTGGGGCGGGACAATGGAC
GCGCTCGACAAGTACCTCATACAGCTGCAAGCCGATCGCTGA

Upstream 100 bases:

>100_bases
CAGCAACTGCAGCGGCATCCTGTCAAGGACTCCAACGTAAACGCTGCGCCGAGAGCCACACCTAAAGTTTCCTCAACCAG
AACCAGGAAGACTCGCCCCC

Downstream 100 bases:

>100_bases
GTCGGGGGACAAAAGAGAAGCGCACTTTAGGTGCGCCTCTTCACTTCGTGTAACCACACGCCGGAGCCGGACAGATGAAT
ACTCCGTCGCCCCTGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAMKPRGVPDAPAMWGKWTFREL
TPPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSEVEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMD
ALDKYLIQLQADR

Sequences:

>Translated_173_residues
MTDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAMKPRGVPDAPAMWGKWTFREL
TPPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSEVEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMD
ALDKYLIQLQADR
>Mature_172_residues
TDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAMKPRGVPDAPAMWGKWTFRELT
PPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSEVEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMDA
LDKYLIQLQADR

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19158; Mature: 19027

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAM
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEE
KPRGVPDAPAMWGKWTFRELTPPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSE
CCCCCCCCCCCCCCEEHHCCCCCEEEEEEEEECCCCCCEEECCCCCCCCEEEEECCCHHH
VEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMDALDKYLIQLQADR
CCCCEEEEEEEEECCCCCCCCCEECCCHHHHHCCCCCCHHHHHHHHEEEECCC
>Mature Secondary Structure 
TDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAM
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEE
KPRGVPDAPAMWGKWTFRELTPPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSE
CCCCCCCCCCCCCCEEHHCCCCCEEEEEEEEECCCCCCEEECCCCCCCCEEEEECCCHHH
VEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMDALDKYLIQLQADR
CCCCEEEEEEEEECCCCCCCCCEECCCHHHHHCCCCCCHHHHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA