| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ywbO [H]
Identifier: 78066417
GI number: 78066417
Start: 1970601
End: 1971266
Strand: Reverse
Name: ywbO [H]
Synonym: Bcep18194_A4948
Alternate gene names: 78066417
Gene position: 1971266-1970601 (Counterclockwise)
Preceding gene: 78066420
Following gene: 78066416
Centisome position: 53.36
GC content: 61.86
Gene sequence:
>666_bases ATGAATCCGCTCGATATCCAGGTCACGTATGACTTCATCTGCCCGTGGTGCTGGATCGGCCACGAACATCTCAAGACAGC GCTCCGCGAGGTCGACCTGGCCGTCGCACCGACCGTCAAGTACCTGCCGTATGAACTCAATCCGACCATGCCCAAGGACG GAATCGATCGAAAGGCATATCGCAGCGCCAAATTCGGCAGTTGGGCACGTTCGCAGGCGATGGATGCCGACGTCACGCTG GCGGGCAAGCGAGCAGGTGTCGAATTCAACTACGACCGCGTGGCGGTGACGCCCAACACACGGCTTGCCCATCGCCTGAT GTTCCTTGCTCAGTCCAAGGGAAATGCGGCCAGGACCGAAGCACTCTTCGAGGCGATTTTCTCTGCGTACTTTTCCGAAG GACAGGACATCGGCATGGCCGAGGTTCTGGTCAGCCTCGCGGAAAGTGCGGGGTTCGACGCCGACGAAGTGCGCAGTTTC CTGGCGACGAACGACGGCGAGCGTGAAGTCGTTGCCGACGAACTGCGGGCCGCGGCCACCGGCATCCGGTCGGTGCCGAC CATTCATGTCGGCGGCGTTCCGGTCAGCGGTGCACAACCGGTTTCGGTGCTCGCTCAGGTACTTCGAACCGCCACCGGCG ACAACACGGCCAAGGCCGCAGTCTGA
Upstream 100 bases:
>100_bases CCTTTGCACACACCGCAACGCTGGTTTGCGATTGACTCATATTCACTTACTCTGACGCAAAGCCTAAAGTACTCGTACCG TCAACGCAAGGAGCTTCCAA
Downstream 100 bases:
>100_bases ATCGACACCCGCAGGTGAACGCCGGCGCGCACGCCCAGCTCGCTGAACCGGGCATGCGCGCCAGGCGCAACGCAATGGTC GAATGGCCGCCAACGCGGCA
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNPLDIQVTYDFICPWCWIGHEHLKTALREVDLAVAPTVKYLPYELNPTMPKDGIDRKAYRSAKFGSWARSQAMDADVTL AGKRAGVEFNYDRVAVTPNTRLAHRLMFLAQSKGNAARTEALFEAIFSAYFSEGQDIGMAEVLVSLAESAGFDADEVRSF LATNDGEREVVADELRAAATGIRSVPTIHVGGVPVSGAQPVSVLAQVLRTATGDNTAKAAV
Sequences:
>Translated_221_residues MNPLDIQVTYDFICPWCWIGHEHLKTALREVDLAVAPTVKYLPYELNPTMPKDGIDRKAYRSAKFGSWARSQAMDADVTL AGKRAGVEFNYDRVAVTPNTRLAHRLMFLAQSKGNAARTEALFEAIFSAYFSEGQDIGMAEVLVSLAESAGFDADEVRSF LATNDGEREVVADELRAAATGIRSVPTIHVGGVPVSGAQPVSVLAQVLRTATGDNTAKAAV >Mature_221_residues MNPLDIQVTYDFICPWCWIGHEHLKTALREVDLAVAPTVKYLPYELNPTMPKDGIDRKAYRSAKFGSWARSQAMDADVTL AGKRAGVEFNYDRVAVTPNTRLAHRLMFLAQSKGNAARTEALFEAIFSAYFSEGQDIGMAEVLVSLAESAGFDADEVRSF LATNDGEREVVADELRAAATGIRSVPTIHVGGVPVSGAQPVSVLAQVLRTATGDNTAKAAV
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23904; Mature: 23904
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLDIQVTYDFICPWCWIGHEHLKTALREVDLAVAPTVKYLPYELNPTMPKDGIDRKAY CCCEEEEEEHHHHCCHHHCCHHHHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCCCHHHH RSAKFGSWARSQAMDADVTLAGKRAGVEFNYDRVAVTPNTRLAHRLMFLAQSKGNAARTE HHCCCCCHHHHHCCCCCEEEECCCCCCEECCCEEEECCCHHHHHHHHHHHHCCCCHHHHH ALFEAIFSAYFSEGQDIGMAEVLVSLAESAGFDADEVRSFLATNDGEREVVADELRAAAT HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH GIRSVPTIHVGGVPVSGAQPVSVLAQVLRTATGDNTAKAAV HHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNPLDIQVTYDFICPWCWIGHEHLKTALREVDLAVAPTVKYLPYELNPTMPKDGIDRKAY CCCEEEEEEHHHHCCHHHCCHHHHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCCCHHHH RSAKFGSWARSQAMDADVTLAGKRAGVEFNYDRVAVTPNTRLAHRLMFLAQSKGNAARTE HHCCCCCHHHHHCCCCCEEEECCCCCCEECCCEEEECCCHHHHHHHHHHHHCCCCHHHHH ALFEAIFSAYFSEGQDIGMAEVLVSLAESAGFDADEVRSFLATNDGEREVVADELRAAAT HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH GIRSVPTIHVGGVPVSGAQPVSVLAQVLRTATGDNTAKAAV HHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]