Click here to switch to the map view.

The map label for this gene is 78066420

Identifier: 78066420

GI number: 78066420

Start: 1974047

End: 1974766

Strand: Reverse

Name: 78066420

Synonym: Bcep18194_A4951

Alternate gene names: NA

Gene position: 1974766-1974047 (Counterclockwise)

Preceding gene: 78066422

Following gene: 78066417

Centisome position: 53.46

GC content: 61.25

Gene sequence:

>720_bases
ATGAGCGAACGCAAGCGCAGCACGACGCCCCGCAGCCGCGGGACGAACGTCCCCGATGATGCCGTCACGCCAGGTCGGCG
ACTCACGCCGGAGGCGCGCGAGCGACAAATCATTGAGAAAGCGATCGAGCATTTCGCGACACACGGCTTTTCCGGCAGCA
CGCGCGAACTCGCGCGGCAGATTGGCGTTACGCAACCCTTGCTCTACCGTTACTTTCCGAGCAAGGAAGCCCTGATCGAT
CGGGTGTACGACGAAATCTATACCTGGAACCCTGAGTGGGAAAAGCTGATTGCCGATCGCACGATCCCGCTTCAGGCGCG
CCTCGTCACCTTCTACAGCTCCTATTCACAAACCATTCTGCGGCGCGAGTGGATCAGGACGTTCATTTTCGCCGGGCTTA
GCCGCGAAGGCTTCAATACTCGCTACCTGTCGCGGCTCCGCGAGCGCGTGTTCCTGCCCGTGTTGCGCGAGTTGCGGGAC
GCTTTCGACATCGCAACACCGACGACGGCAGCCCAGATCGACGCGGAGATCGAGCTGATCTGGAGCTTGCACGCGAGCAT
CTTCTACTTGGGCGTCAGGAAGTGGGTGTATGGCTTGCCCATCCCTGACGACCTCGATGCCGTGATCGAACGGCAGATCA
TCGCTTTCCTGCACGGCACGCCAATAGCGCTAAAGCAACTCACCGGCAGCGTGACGCGCGCACGCGGCAAGCAGCGCTGA

Upstream 100 bases:

>100_bases
TTCCTGAAATCGATGACAATCTGTCACGAGCGCGGCACCTATCGTTTCTTGCTATTTTTCGACCGATAGGTTAAGAATGC
CCGCTATCAGGAGCCCATGA

Downstream 100 bases:

>100_bases
AGCGCAAGCGCTTTGCGCTACATCGCATCAAGGCGCTACGACTGACGGTTGCTACCTTCTCGAATGGACACCGCAGTATG
CCGCGCACTGGTCAGAATCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSERKRSTTPRSRGTNVPDDAVTPGRRLTPEARERQIIEKAIEHFATHGFSGSTRELARQIGVTQPLLYRYFPSKEALID
RVYDEIYTWNPEWEKLIADRTIPLQARLVTFYSSYSQTILRREWIRTFIFAGLSREGFNTRYLSRLRERVFLPVLRELRD
AFDIATPTTAAQIDAEIELIWSLHASIFYLGVRKWVYGLPIPDDLDAVIERQIIAFLHGTPIALKQLTGSVTRARGKQR

Sequences:

>Translated_239_residues
MSERKRSTTPRSRGTNVPDDAVTPGRRLTPEARERQIIEKAIEHFATHGFSGSTRELARQIGVTQPLLYRYFPSKEALID
RVYDEIYTWNPEWEKLIADRTIPLQARLVTFYSSYSQTILRREWIRTFIFAGLSREGFNTRYLSRLRERVFLPVLRELRD
AFDIATPTTAAQIDAEIELIWSLHASIFYLGVRKWVYGLPIPDDLDAVIERQIIAFLHGTPIALKQLTGSVTRARGKQR
>Mature_238_residues
SERKRSTTPRSRGTNVPDDAVTPGRRLTPEARERQIIEKAIEHFATHGFSGSTRELARQIGVTQPLLYRYFPSKEALIDR
VYDEIYTWNPEWEKLIADRTIPLQARLVTFYSSYSQTILRREWIRTFIFAGLSREGFNTRYLSRLRERVFLPVLRELRDA
FDIATPTTAAQIDAEIELIWSLHASIFYLGVRKWVYGLPIPDDLDAVIERQIIAFLHGTPIALKQLTGSVTRARGKQR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27708; Mature: 27577

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERKRSTTPRSRGTNVPDDAVTPGRRLTPEARERQIIEKAIEHFATHGFSGSTRELARQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
IGVTQPLLYRYFPSKEALIDRVYDEIYTWNPEWEKLIADRTIPLQARLVTFYSSYSQTIL
HCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RREWIRTFIFAGLSREGFNTRYLSRLRERVFLPVLRELRDAFDIATPTTAAQIDAEIELI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
WSLHASIFYLGVRKWVYGLPIPDDLDAVIERQIIAFLHGTPIALKQLTGSVTRARGKQR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SERKRSTTPRSRGTNVPDDAVTPGRRLTPEARERQIIEKAIEHFATHGFSGSTRELARQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
IGVTQPLLYRYFPSKEALIDRVYDEIYTWNPEWEKLIADRTIPLQARLVTFYSSYSQTIL
HCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RREWIRTFIFAGLSREGFNTRYLSRLRERVFLPVLRELRDAFDIATPTTAAQIDAEIELI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
WSLHASIFYLGVRKWVYGLPIPDDLDAVIERQIIAFLHGTPIALKQLTGSVTRARGKQR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA