| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066312
Identifier: 78066312
GI number: 78066312
Start: 1859792
End: 1860847
Strand: Direct
Name: 78066312
Synonym: Bcep18194_A4842
Alternate gene names: NA
Gene position: 1859792-1860847 (Clockwise)
Preceding gene: 78066311
Following gene: 78066313
Centisome position: 50.34
GC content: 67.05
Gene sequence:
>1056_bases ATGCAATTTCTCGACGATTCGCTGCACCCGGAAAACCAGGACAAGGTGGTCATCACGGTCGCGCCGTACGGCCCCGAATG GATGCCGGCCGATTTTCCGGAAGACATTCCGGTGACGATGGACGAGCACGTGCAGAAGGCCGTCGACTGCTACAACGCGG GCGCCACGGTGCTGCACATGCATGTGCGCGAGCTCGACGGCAAGGGCAGCAAGCGGCTGTCGAAGTTCAACGAGCTGCTC GGCCGGCTGCGCGAGGCGGTGCCCGACATGATCCTGCAGGTGGGCGGCTCGATCTCGTTCGCGCCGGAAGGCGAGGGCGC CGACGCGAAATGGCTGTCCGACGACACGCGCCACATGCTCGCCGAGCTGACGCCGAAGCCCGACCAGGTGACGGTCGCGA TCAACACCGTGCAGATGAACATCACCGAGCTGATGAACCGCAAGGACATCGCGGGCACGTCGCTGAACGAAGCCGCGCTG TGGGACGCCTACCGCGAGATGACGGTGCCGGCCGGCCCCGGCTGGGTCGACGAGCACCTGCGCCGCCTGCAGGCGGCCGG CATCCAGCCGCATTTCCAGCTCACCGGCATGCACGCGCTGGAAACGCTCGAACGGATCATCCGCCGCGGCGTCTATCGCG GCCCGCTGAACGTCACGTGGGTCGGCATCGGCGGCGGCTTCGACGGCCCGAATCCGTACAACTTCATGGAATTCGTGCGG CGCTGCCCGGACGGCGCGTGCATCACGCTCGAATCGCTGATGAAGAACGTGCTGCCGATCAACACGGTCGCGATGGCGCT GGGCCTGCATCCGCGCTGCGGGATCGAGGACACGATCATCGACCAGAAGGGCAACCGGATGACGTCGGTGCAGCAGGTCG AGCAGTGCGCACGGATCGCGCGCGAACTCGGCCGCGACATCGCCACCGGCAAGGAGGCGAAGGCGATCTACCGGATCGGC GTGCAGTACGACGGCATCGACGAGACGCTCGCACACCTCGGAATGGCACCGAACCGCCGGCCGGGCCAGGCGAACGTGCC GCTGCGGGCCGCCTGA
Upstream 100 bases:
>100_bases GTCTCTGAAAAACCATGCAACGCGCCGGGCCTCCCGCCCGGCGTGGCGGGATACGCACGCCCGTACGCCCGAAATACAAC GATTTCCACTGGAGGACGAC
Downstream 100 bases:
>100_bases CGCGCCGCGCATCCGGGCAGGCGGCCCTCGCGGCCGCCGCCCGCCGATCGTTGTGGCGTGGCACCCATCCCCGCGCACGG CGCGGGGGCTGACTCCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MQFLDDSLHPENQDKVVITVAPYGPEWMPADFPEDIPVTMDEHVQKAVDCYNAGATVLHMHVRELDGKGSKRLSKFNELL GRLREAVPDMILQVGGSISFAPEGEGADAKWLSDDTRHMLAELTPKPDQVTVAINTVQMNITELMNRKDIAGTSLNEAAL WDAYREMTVPAGPGWVDEHLRRLQAAGIQPHFQLTGMHALETLERIIRRGVYRGPLNVTWVGIGGGFDGPNPYNFMEFVR RCPDGACITLESLMKNVLPINTVAMALGLHPRCGIEDTIIDQKGNRMTSVQQVEQCARIARELGRDIATGKEAKAIYRIG VQYDGIDETLAHLGMAPNRRPGQANVPLRAA
Sequences:
>Translated_351_residues MQFLDDSLHPENQDKVVITVAPYGPEWMPADFPEDIPVTMDEHVQKAVDCYNAGATVLHMHVRELDGKGSKRLSKFNELL GRLREAVPDMILQVGGSISFAPEGEGADAKWLSDDTRHMLAELTPKPDQVTVAINTVQMNITELMNRKDIAGTSLNEAAL WDAYREMTVPAGPGWVDEHLRRLQAAGIQPHFQLTGMHALETLERIIRRGVYRGPLNVTWVGIGGGFDGPNPYNFMEFVR RCPDGACITLESLMKNVLPINTVAMALGLHPRCGIEDTIIDQKGNRMTSVQQVEQCARIARELGRDIATGKEAKAIYRIG VQYDGIDETLAHLGMAPNRRPGQANVPLRAA >Mature_351_residues MQFLDDSLHPENQDKVVITVAPYGPEWMPADFPEDIPVTMDEHVQKAVDCYNAGATVLHMHVRELDGKGSKRLSKFNELL GRLREAVPDMILQVGGSISFAPEGEGADAKWLSDDTRHMLAELTPKPDQVTVAINTVQMNITELMNRKDIAGTSLNEAAL WDAYREMTVPAGPGWVDEHLRRLQAAGIQPHFQLTGMHALETLERIIRRGVYRGPLNVTWVGIGGGFDGPNPYNFMEFVR RCPDGACITLESLMKNVLPINTVAMALGLHPRCGIEDTIIDQKGNRMTSVQQVEQCARIARELGRDIATGKEAKAIYRIG VQYDGIDETLAHLGMAPNRRPGQANVPLRAA
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38795; Mature: 38795
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLDDSLHPENQDKVVITVAPYGPEWMPADFPEDIPVTMDEHVQKAVDCYNAGATVLHM CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH HVRELDGKGSKRLSKFNELLGRLREAVPDMILQVGGSISFAPEGEGADAKWLSDDTRHML HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHH AELTPKPDQVTVAINTVQMNITELMNRKDIAGTSLNEAALWDAYREMTVPAGPGWVDEHL HHCCCCCCEEEEEEEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH RRLQAAGIQPHFQLTGMHALETLERIIRRGVYRGPLNVTWVGIGGGFDGPNPYNFMEFVR HHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH RCPDGACITLESLMKNVLPINTVAMALGLHPRCGIEDTIIDQKGNRMTSVQQVEQCARIA HCCCCCEEEHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH RELGRDIATGKEAKAIYRIGVQYDGIDETLAHLGMAPNRRPGQANVPLRAA HHHHHHHHCCCHHCEEEEECCEECCHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQFLDDSLHPENQDKVVITVAPYGPEWMPADFPEDIPVTMDEHVQKAVDCYNAGATVLHM CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH HVRELDGKGSKRLSKFNELLGRLREAVPDMILQVGGSISFAPEGEGADAKWLSDDTRHML HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHH AELTPKPDQVTVAINTVQMNITELMNRKDIAGTSLNEAALWDAYREMTVPAGPGWVDEHL HHCCCCCCEEEEEEEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH RRLQAAGIQPHFQLTGMHALETLERIIRRGVYRGPLNVTWVGIGGGFDGPNPYNFMEFVR HHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH RCPDGACITLESLMKNVLPINTVAMALGLHPRCGIEDTIIDQKGNRMTSVQQVEQCARIA HCCCCCEEEHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH RELGRDIATGKEAKAIYRIGVQYDGIDETLAHLGMAPNRRPGQANVPLRAA HHHHHHHHCCCHHCEEEEECCEECCHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA