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The map label for this gene is cbiD

Identifier: 78066297

GI number: 78066297

Start: 1843869

End: 1844957

Strand: Direct

Name: cbiD

Synonym: Bcep18194_A4827

Alternate gene names: 78066297

Gene position: 1843869-1844957 (Clockwise)

Preceding gene: 78066296

Following gene: 78066298

Centisome position: 49.91

GC content: 70.98

Gene sequence:

>1089_bases
ATGCGCGACGAGACCCCCGAACAGCCCGCGCCGCTACGCTTCGGCTATACGACCGGCAGCTGCGCGACCGCGACGTCGCT
CGCCGCCGCACGGCTGCTGCTCGCGGGTAGTGCGGACGACGCGGTCGAGATCGTGCTGCCGAAGGGGCAGCGCGTGATGA
TGCGGCTCGAGTTCTGCCGGGCCACGGCCGACGGTGCGGAAGCCGCCACGATCAAGGATGCCGGCGACGATCCGGACGTC
ACGCACGGCGCGCTGATCTTCGCGCGCGTCGCGCTCGCGTCGGCGCCCGGCGTGCGGTTTCATGCGGGGCCGGGCGTCGG
CACGGTCACGCGCGCGGGGCTGACGCTGCCGGTCGGTGAACCGGCAATCAACCCGGTGCCGCGCCAGATGATGACGACGC
ACCTGGAAGCGCTGGCGGCCGAGCACGGCTACGCGGGCGGCTTCGACGTGACGATCGGTGTGGAAGGCGGCGAAGCGCTC
GCGCTAAAGACGATGAACCCGCGGCTCGGCATCGTCGGCGGGCTGTCGATCCTCGGCACGACCGGCATCGTGCGGCCGTT
CTCGTGTTCGGCCTATATCGCGTCGATCCACCAGGGCATCGACGTCGCACGCGCGAACGGTATCGCGCATATCGCCGCAT
GCACCGGCAACGCGAGCGAGGACGCGATGCGCGCGCACTACCAACTGCCCGACATGGCGCTGATCGAGATGGGCGATTTC
GCGGGTGCGGTCCTCAAGCACCTGCGGCGCGCACCGGTCGCGCGGCTGTCGATGTGCGGCGGCTTCGGCAAGCTCAGCAA
GCTCGCGGCCGGCCATCTCGACCTGCACAGCCGCCATTCGAGCATCGACCTGCCGCTGCTCGCGCAGTGGGCGGCCGAAG
CCGGCGCAAGCGATGCGCTGCAGGCCGCGATGCGCGCCGCGAACACGAGCCAGGAAGCGCTGAAGCTCGCGCATGCCGAC
GGCGTGCCGCTCGGCGATCTCGTTTGCGCACAGGCGCTGCGCGTCGCGCGCGACATCGTGCCGCCGTCGGTCGCTGTCGA
GATATTCGCGATCGACCGGCAGGGCCGCTTCGTCGGGGAGGCGCGATGA

Upstream 100 bases:

>100_bases
CGTGGCGGCAACCGTTGCCGGTCACGCTGTACGACGTGCGCAAGCCCGACACCGCCGACACGCCCGCACCGTCGACCGCG
ACGAACGCAACGGACGCGTG

Downstream 100 bases:

>100_bases
GTACGCGCATCCTGCTGCTCGGCGGCACCGGCGATGCGCTGAAGATTGCACGCGCGCTCGGGCCTCGTCACGTCTACAGC
CTGGCCGGCCTCGGCAAGGT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGSADDAVEIVLPKGQRVMMRLEFCRATADGAEAATIKDAGDDPDV
THGALIFARVALASAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDALQAAMRAANTSQEALKLAHAD
GVPLGDLVCAQALRVARDIVPPSVAVEIFAIDRQGRFVGEAR

Sequences:

>Translated_362_residues
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGSADDAVEIVLPKGQRVMMRLEFCRATADGAEAATIKDAGDDPDV
THGALIFARVALASAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDALQAAMRAANTSQEALKLAHAD
GVPLGDLVCAQALRVARDIVPPSVAVEIFAIDRQGRFVGEAR
>Mature_362_residues
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGSADDAVEIVLPKGQRVMMRLEFCRATADGAEAATIKDAGDDPDV
THGALIFARVALASAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDALQAAMRAANTSQEALKLAHAD
GVPLGDLVCAQALRVARDIVPPSVAVEIFAIDRQGRFVGEAR

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 37426; Mature: 37426

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGSADDAVEIVLPKGQRVMMRLEFCR
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHH
ATADGAEAATIKDAGDDPDVTHGALIFARVALASAPGVRFHAGPGVGTVTRAGLTLPVGE
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCEEEECCC
PAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEALALKTMNPRLGIVGGLSILGT
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHCC
TGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
CCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEHHHH
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDAL
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHCCCHHHH
QAAMRAANTSQEALKLAHADGVPLGDLVCAQALRVARDIVPPSVAVEIFAIDRQGRFVGE
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC
AR
CC
>Mature Secondary Structure
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGSADDAVEIVLPKGQRVMMRLEFCR
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHH
ATADGAEAATIKDAGDDPDVTHGALIFARVALASAPGVRFHAGPGVGTVTRAGLTLPVGE
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCEEEECCC
PAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEALALKTMNPRLGIVGGLSILGT
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHCC
TGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
CCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEHHHH
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDAL
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHCCCHHHH
QAAMRAANTSQEALKLAHADGVPLGDLVCAQALRVARDIVPPSVAVEIFAIDRQGRFVGE
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA