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The map label for this gene is cobH

Identifier: 78066293

GI number: 78066293

Start: 1839781

End: 1840407

Strand: Reverse

Name: cobH

Synonym: Bcep18194_A4823

Alternate gene names: 78066293

Gene position: 1840407-1839781 (Counterclockwise)

Preceding gene: 78066294

Following gene: 78066292

Centisome position: 49.82

GC content: 69.7

Gene sequence:

>627_bases
ATGCTTGACTACATTCGCGACGGGCAGGAAATCTACCGCCAGTCGTTCGCGACGATCCGCGCCGAGGCCGACCTGTCGCA
GGTTCCGCCCGACCTCGAGAAACTCGCGGTGCGCGTGATCCATGCGTGCGGGATGGTCGACGTCGTCTACGACCTGCGCT
TCTCGGCCGGTGCCGGCACGGCAGGCCGCACGGCGCTTGCCGCCGGTGCGCCGATCCTGTGCGACGCGAGGATGGTCGCC
GAAGGCATCACGCGCGCACGGCTGCCGGCCGACAACCGCGTGATCTGCACGCTCGGCGAGCCCGAGGTGCCCGATCTCGC
GCGACATCTCGGCAACACGCGTTCGGCGGCCGCGCTCGAACTGTGGCGCCCGCATCTCGCCGGCAGCGTCGTCGTGATCG
GCAATGCACCGACCGCGCTGTTTCACCTGCTCGACATGATCGACGCCGGTGCACCGCGCCCAGCATTGATTCTCGGTTTC
CCGGTCGGCTTCATCGGCGCGGCCGAATCGAAGGCGCTGCTCGATGCCGACAGCCGCGGCGTGCCGTACGTCGCGCTGCT
CGGCCGGCGTGGCGGCAGCGCGATGGCCGCTGCGGCGATCAACGCCCTCGCGACGGAGGTCGAATGA

Upstream 100 bases:

>100_bases
GACGCCGCTGCGGGCCTCGGCGCCCCGCTCGCGCGCCATCTGACGATTGACCAGGCCGCGGCCCGACTGACGGGCGCGCG
GCACAGCCAGGACACCACCG

Downstream 100 bases:

>100_bases
CGACCGCGCGCGGACGCCTGTTCGGGGTCGGCGTCGGCCCCGGCGATCCTGAACTGATGACGATCAAGGCGCTGCGCGTG
CTGCAGGCCGCGCCCGTGGT

Product: precorrin-8X methylmutase

Products: NA

Alternate protein names: HBA synthase; Precorrin isomerase [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLDYIRDGQEIYRQSFATIRAEADLSQVPPDLEKLAVRVIHACGMVDVVYDLRFSAGAGTAGRTALAAGAPILCDARMVA
EGITRARLPADNRVICTLGEPEVPDLARHLGNTRSAAALELWRPHLAGSVVVIGNAPTALFHLLDMIDAGAPRPALILGF
PVGFIGAAESKALLDADSRGVPYVALLGRRGGSAMAAAAINALATEVE

Sequences:

>Translated_208_residues
MLDYIRDGQEIYRQSFATIRAEADLSQVPPDLEKLAVRVIHACGMVDVVYDLRFSAGAGTAGRTALAAGAPILCDARMVA
EGITRARLPADNRVICTLGEPEVPDLARHLGNTRSAAALELWRPHLAGSVVVIGNAPTALFHLLDMIDAGAPRPALILGF
PVGFIGAAESKALLDADSRGVPYVALLGRRGGSAMAAAAINALATEVE
>Mature_208_residues
MLDYIRDGQEIYRQSFATIRAEADLSQVPPDLEKLAVRVIHACGMVDVVYDLRFSAGAGTAGRTALAAGAPILCDARMVA
EGITRARLPADNRVICTLGEPEVPDLARHLGNTRSAAALELWRPHLAGSVVVIGNAPTALFHLLDMIDAGAPRPALILGF
PVGFIGAAESKALLDADSRGVPYVALLGRRGGSAMAAAAINALATEVE

Specific function: Catalyzes the conversion of precorrin-8X to hydrogenobyrinic acid; a methyl migration reaction during the transformation of precorrin-3 to form cobyrinic acid [H]

COG id: COG2082

COG function: function code H; Precorrin isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003722 [H]

Pfam domain/function: PF02570 CbiC [H]

EC number: =5.4.1.2 [H]

Molecular weight: Translated: 21762; Mature: 21762

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDYIRDGQEIYRQSFATIRAEADLSQVPPDLEKLAVRVIHACGMVDVVYDLRFSAGAGT
CCCCHHCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
AGRTALAAGAPILCDARMVAEGITRARLPADNRVICTLGEPEVPDLARHLGNTRSAAALE
CCCHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCCHHHHH
LWRPHLAGSVVVIGNAPTALFHLLDMIDAGAPRPALILGFPVGFIGAAESKALLDADSRG
HHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCCEECCCCCC
VPYVALLGRRGGSAMAAAAINALATEVE
CCEEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDYIRDGQEIYRQSFATIRAEADLSQVPPDLEKLAVRVIHACGMVDVVYDLRFSAGAGT
CCCCHHCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
AGRTALAAGAPILCDARMVAEGITRARLPADNRVICTLGEPEVPDLARHLGNTRSAAALE
CCCHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCCHHHHH
LWRPHLAGSVVVIGNAPTALFHLLDMIDAGAPRPALILGFPVGFIGAAESKALLDADSRG
HHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCCEECCCCCC
VPYVALLGRRGGSAMAAAAINALATEVE
CCEEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]