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The map label for this gene is nirA [H]

Identifier: 78066294

GI number: 78066294

Start: 1840400

End: 1841836

Strand: Reverse

Name: nirA [H]

Synonym: Bcep18194_A4824

Alternate gene names: 78066294

Gene position: 1841836-1840400 (Counterclockwise)

Preceding gene: 78066300

Following gene: 78066293

Centisome position: 49.86

GC content: 73.35

Gene sequence:

>1437_bases
TTGGCCGCGGCGCGACACTGCCCCGGTACCCCGTTGAGTTCCGCCCCCGTTTCGATTCCTGCGTCGCCCGTCGTGCGCCC
ATCGGCCTGCCCGGGGCTCGTGCGCGTGGTCACGGCCGCCGACGGCGGGCTGTGCCGGATCAAGCTGCCGGGCGGCCGGC
TCGACGCGCGCCAGGCCCGTGCGATTGCCGCTGCCGCGCGGGCATTCGGCTCCGGCACGATCGATGCGACCAATCGCGCG
AATCTCCAACTGCGCGGCATTCGCGACGGCGCGGCCGACGCGCTGACGCGCGCGTTGCTCGACGCGGGTCTCGGCCCCCG
CATTGACGGCAGCGCCAATGCCACCGCCGACGCAGCCGCGCTCGCCGCGAGCGACGACGTCCGCAACCTGATGCTCAGCC
CGCTCGCCGGCCACGATCCCGCCGCGCTCGTTGATAGCCGCGCACTCGCCGCACCGCTCTTCGACATGCTGGCGCGCGAG
CCACGCCGCGGCGAACTGTCGCCGAAATTCTCGATCCAGCTCGACGGCGGCGAATCGGTTGCGGCGCTCGACCATCCGCA
CGACATCTGGCTGGCCGCCTGGCACCGCAGCGACGGCGCGGTGCGCGTCGCTGCCGGGCTGGCCGGTTGCCCGCCGGTCG
CGCACGACGACCCGCCCGCTTCGGTCGATGTCGCGCCCGATCAAGGTGTCGCACTGGTCCGCGCGCTGCTGCTCGCGTTC
CTCGATCTTGCTCCGGCCGACGTCACGCGGATGCGCGCGCTGCTCGCAACGTGCGGCGAACGCACATTGCTCGAACGCGC
GCAGCGCTATTTACCCTTCCCGCTTGCAGCCGATCCAGCGCTTGCCGGCTGGCGCCGTACGCGCGCCGACGCGGCGCTGC
GTTTCGGCGTGCGCCCGTCGCGCGATGCGGCGCGCTGCAACGTCGGCGCGCAATGCGTGCTCGGCCGGCTCGATGCCACG
CAACTGGAACGGCTCGCCGCGCTGGCCGAAACCGACGGCGACGGCACGCTGTCGATGACACCGTGGCAAGGCGTGTTCCT
GCATCGCGTGTCGCTCGAACGCGCACCGGCCACGCTCGATGCGCTCGCGTCGCTCGGCCTCGTCTGCGCGTCGTCCGACC
CGCTGGCGACGCTCGTTGCATGCACCGGCAGCACGGGCTGCGCGAAGGCACGCGCCGACACCAAACACGACGCGCTCGCG
CTCGCCGCCCGCATCGGCCACGCGGTCGACGTGCACCTGACCGGCTGCGAACGCCACTGCGCGCTGCCGCATCCCGCGAC
GCACACGCTCGTCGCGGTGGCGCCCGCGCACTACGACCTTTACCGGCGCGACGCCGCTGCGGGCCTCGGCGCCCCGCTCG
CGCGCCATCTGACGATTGACCAGGCCGCGGCCCGACTGACGGGCGCGCGGCACAGCCAGGACACCACCGATGCTTGA

Upstream 100 bases:

>100_bases
CCGGGAAGGCCGGGAGCCGGCGCCGACCTGTCAGCCAGGAGACCTGCCGGCCTGAAAGTGCGTGCGTGCCAGTCGGCGTC
GGGCGGGGTGTACCGATGCG

Downstream 100 bases:

>100_bases
CTACATTCGCGACGGGCAGGAAATCTACCGCCAGTCGTTCGCGACGATCCGCGCCGAGGCCGACCTGTCGCAGGTTCCGC
CCGACCTCGAGAAACTCGCG

Product: nitrite/sulfite reductase, hemoprotein beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MAAARHCPGTPLSSAPVSIPASPVVRPSACPGLVRVVTAADGGLCRIKLPGGRLDARQARAIAAAARAFGSGTIDATNRA
NLQLRGIRDGAADALTRALLDAGLGPRIDGSANATADAAALAASDDVRNLMLSPLAGHDPAALVDSRALAAPLFDMLARE
PRRGELSPKFSIQLDGGESVAALDHPHDIWLAAWHRSDGAVRVAAGLAGCPPVAHDDPPASVDVAPDQGVALVRALLLAF
LDLAPADVTRMRALLATCGERTLLERAQRYLPFPLAADPALAGWRRTRADAALRFGVRPSRDAARCNVGAQCVLGRLDAT
QLERLAALAETDGDGTLSMTPWQGVFLHRVSLERAPATLDALASLGLVCASSDPLATLVACTGSTGCAKARADTKHDALA
LAARIGHAVDVHLTGCERHCALPHPATHTLVAVAPAHYDLYRRDAAAGLGAPLARHLTIDQAAARLTGARHSQDTTDA

Sequences:

>Translated_478_residues
MAAARHCPGTPLSSAPVSIPASPVVRPSACPGLVRVVTAADGGLCRIKLPGGRLDARQARAIAAAARAFGSGTIDATNRA
NLQLRGIRDGAADALTRALLDAGLGPRIDGSANATADAAALAASDDVRNLMLSPLAGHDPAALVDSRALAAPLFDMLARE
PRRGELSPKFSIQLDGGESVAALDHPHDIWLAAWHRSDGAVRVAAGLAGCPPVAHDDPPASVDVAPDQGVALVRALLLAF
LDLAPADVTRMRALLATCGERTLLERAQRYLPFPLAADPALAGWRRTRADAALRFGVRPSRDAARCNVGAQCVLGRLDAT
QLERLAALAETDGDGTLSMTPWQGVFLHRVSLERAPATLDALASLGLVCASSDPLATLVACTGSTGCAKARADTKHDALA
LAARIGHAVDVHLTGCERHCALPHPATHTLVAVAPAHYDLYRRDAAAGLGAPLARHLTIDQAAARLTGARHSQDTTDA
>Mature_477_residues
AAARHCPGTPLSSAPVSIPASPVVRPSACPGLVRVVTAADGGLCRIKLPGGRLDARQARAIAAAARAFGSGTIDATNRAN
LQLRGIRDGAADALTRALLDAGLGPRIDGSANATADAAALAASDDVRNLMLSPLAGHDPAALVDSRALAAPLFDMLAREP
RRGELSPKFSIQLDGGESVAALDHPHDIWLAAWHRSDGAVRVAAGLAGCPPVAHDDPPASVDVAPDQGVALVRALLLAFL
DLAPADVTRMRALLATCGERTLLERAQRYLPFPLAADPALAGWRRTRADAALRFGVRPSRDAARCNVGAQCVLGRLDATQ
LERLAALAETDGDGTLSMTPWQGVFLHRVSLERAPATLDALASLGLVCASSDPLATLVACTGSTGCAKARADTKHDALAL
AARIGHAVDVHLTGCERHCALPHPATHTLVAVAPAHYDLYRRDAAAGLGAPLARHLTIDQAAARLTGARHSQDTTDA

Specific function: Unknown

COG id: COG0155

COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005117
- InterPro:   IPR006067
- InterPro:   IPR006066 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.7.7.1 [H]

Molecular weight: Translated: 49367; Mature: 49235

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAARHCPGTPLSSAPVSIPASPVVRPSACPGLVRVVTAADGGLCRIKLPGGRLDARQAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHH
AIAAAARAFGSGTIDATNRANLQLRGIRDGAADALTRALLDAGLGPRIDGSANATADAAA
HHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LAASDDVRNLMLSPLAGHDPAALVDSRALAAPLFDMLAREPRRGELSPKFSIQLDGGESV
HHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEE
AALDHPHDIWLAAWHRSDGAVRVAAGLAGCPPVAHDDPPASVDVAPDQGVALVRALLLAF
EECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHH
LDLAPADVTRMRALLATCGERTLLERAQRYLPFPLAADPALAGWRRTRADAALRFGVRPS
HHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECCCCC
RDAARCNVGAQCVLGRLDATQLERLAALAETDGDGTLSMTPWQGVFLHRVSLERAPATLD
CCHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEHHHCCCHHHH
ALASLGLVCASSDPLATLVACTGSTGCAKARADTKHDALALAARIGHAVDVHLTGCERHC
HHHHHCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCC
ALPHPATHTLVAVAPAHYDLYRRDAAAGLGAPLARHLTIDQAAARLTGARHSQDTTDA
CCCCCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AAARHCPGTPLSSAPVSIPASPVVRPSACPGLVRVVTAADGGLCRIKLPGGRLDARQAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHH
AIAAAARAFGSGTIDATNRANLQLRGIRDGAADALTRALLDAGLGPRIDGSANATADAAA
HHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LAASDDVRNLMLSPLAGHDPAALVDSRALAAPLFDMLAREPRRGELSPKFSIQLDGGESV
HHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEE
AALDHPHDIWLAAWHRSDGAVRVAAGLAGCPPVAHDDPPASVDVAPDQGVALVRALLLAF
EECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHH
LDLAPADVTRMRALLATCGERTLLERAQRYLPFPLAADPALAGWRRTRADAALRFGVRPS
HHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECCCCC
RDAARCNVGAQCVLGRLDATQLERLAALAETDGDGTLSMTPWQGVFLHRVSLERAPATLD
CCHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEHHHCCCHHHH
ALASLGLVCASSDPLATLVACTGSTGCAKARADTKHDALALAARIGHAVDVHLTGCERHC
HHHHHCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCC
ALPHPATHTLVAVAPAHYDLYRRDAAAGLGAPLARHLTIDQAAARLTGARHSQDTTDA
CCCCCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8490140 [H]