| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066273
Identifier: 78066273
GI number: 78066273
Start: 1816626
End: 1817654
Strand: Reverse
Name: 78066273
Synonym: Bcep18194_A4803
Alternate gene names: NA
Gene position: 1817654-1816626 (Counterclockwise)
Preceding gene: 78066274
Following gene: 78066272
Centisome position: 49.2
GC content: 63.95
Gene sequence:
>1029_bases ATGCGGTTATACGCGTGGGTCGCACGCAACATCCGTTATGTCGGCGTGTATTTCGGCGCCGGGCCGGTCGTTCCGCATCG CGCCGACACGGTTCTCGCCAACCGCTACGGCGACTGCAAGGATCAGGCGACGCTGCTGTCCGCCCTGCTCGATGCAAAGG GCATCGAGAGCCATACCGTGTTGGTCAATCTCGGCAACCGCTATCGGTTGCCGGCCGTACCCGATGTCCTGACGTTCAAT CATGCGATCGTATGGCTGCCGGAATTCGACGTGTTTGCCGACACCACGGTCGGCGTGCTGCCGTTCGGCGCACTGCAGTT CGAGGCGAGCGGCAAGCCCGCGCTCGACACCTCGACCGGCCAGTTGATCGTCACGCCGCCGCAGAACGGCCACAACAGCC GCTCATTGCTGGCTTATGCGGTCGATCTCGATCGTGACGGCAATGCGACGATGACGGGCGACATCACGCTCGACGGCCAG GAAGTCCAGCGGGCGCGCCAGATGTTCATCCACGTCCAGCCGAAGCGGCTTGCCGACGAGATGCTGCGCCGCTACGGCCT CGCGGGCGAGTTGCAGATGAGCCCGCGTCATCTCGACGACCTCGACCAGCCGTTCTCGATCGCATTGCACGGCGATCTGA ACCAGTTGGCGCTGATGCCCGGCCCCGCGGCATTTGCGATCCCGTCGCTGCCCAACTTCGGTCAGATCCGGAGCTTCGCC GATTTCGTGCTCCAGGAGAAAAGCAAGGTATTTGAAGGCGTATGTGCCGGAACGCGGCTCGAGGAGCACTACCGGATCAC ATTGCCGGCCGACGCCCACCTGCTCGCAATCCCGCCGGACGTCTCCGTACGAGTCGGGGAAATCGCCTATCAGTCCACTT ATCACCGTGAAGGCCGGACCGTCGACGTGACGCGCGTGCTCGATCGCAACCTCGGCAGCAACGTGTGCAGCGGCGCGAAG CTCGCCGCGTGGGCAGACGCCGCGCGCAGCATCTCGAAGGATCTGAAGCGGCAGATCCTGTATCGCTAG
Upstream 100 bases:
>100_bases CTACCATATCCGCGCGTTCGATCAGCAGCAGCAGGACGACGCGATCCGCCAGCTCGCAAATTAGTTGACCACCGGGATCG CGGATCGGCGCCAACAGGCG
Downstream 100 bases:
>100_bases GCGCGCGGCACGGGTGTTTCCCATCACGCTGATCCGACCGCGGAGAGCGCCGGACGCGCAGCCGTGCGCCGCAACGCCTG TGCTATCGTATGCGCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transmembrane Protein; Secreted Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Protein; Transglutaminase-Like; Transglutaminase Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRLYAWVARNIRYVGVYFGAGPVVPHRADTVLANRYGDCKDQATLLSALLDAKGIESHTVLVNLGNRYRLPAVPDVLTFN HAIVWLPEFDVFADTTVGVLPFGALQFEASGKPALDTSTGQLIVTPPQNGHNSRSLLAYAVDLDRDGNATMTGDITLDGQ EVQRARQMFIHVQPKRLADEMLRRYGLAGELQMSPRHLDDLDQPFSIALHGDLNQLALMPGPAAFAIPSLPNFGQIRSFA DFVLQEKSKVFEGVCAGTRLEEHYRITLPADAHLLAIPPDVSVRVGEIAYQSTYHREGRTVDVTRVLDRNLGSNVCSGAK LAAWADAARSISKDLKRQILYR
Sequences:
>Translated_342_residues MRLYAWVARNIRYVGVYFGAGPVVPHRADTVLANRYGDCKDQATLLSALLDAKGIESHTVLVNLGNRYRLPAVPDVLTFN HAIVWLPEFDVFADTTVGVLPFGALQFEASGKPALDTSTGQLIVTPPQNGHNSRSLLAYAVDLDRDGNATMTGDITLDGQ EVQRARQMFIHVQPKRLADEMLRRYGLAGELQMSPRHLDDLDQPFSIALHGDLNQLALMPGPAAFAIPSLPNFGQIRSFA DFVLQEKSKVFEGVCAGTRLEEHYRITLPADAHLLAIPPDVSVRVGEIAYQSTYHREGRTVDVTRVLDRNLGSNVCSGAK LAAWADAARSISKDLKRQILYR >Mature_342_residues MRLYAWVARNIRYVGVYFGAGPVVPHRADTVLANRYGDCKDQATLLSALLDAKGIESHTVLVNLGNRYRLPAVPDVLTFN HAIVWLPEFDVFADTTVGVLPFGALQFEASGKPALDTSTGQLIVTPPQNGHNSRSLLAYAVDLDRDGNATMTGDITLDGQ EVQRARQMFIHVQPKRLADEMLRRYGLAGELQMSPRHLDDLDQPFSIALHGDLNQLALMPGPAAFAIPSLPNFGQIRSFA DFVLQEKSKVFEGVCAGTRLEEHYRITLPADAHLLAIPPDVSVRVGEIAYQSTYHREGRTVDVTRVLDRNLGSNVCSGAK LAAWADAARSISKDLKRQILYR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37672; Mature: 37672
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLYAWVARNIRYVGVYFGAGPVVPHRADTVLANRYGDCKDQATLLSALLDAKGIESHTV CEEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEE LVNLGNRYRLPAVPDVLTFNHAIVWLPEFDVFADTTVGVLPFGALQFEASGKPALDTSTG EEECCCEEECCCCCCEEECCCEEEEEECCCCCCCCEECCCCCCEEEEECCCCCCCCCCCC QLIVTPPQNGHNSRSLLAYAVDLDRDGNATMTGDITLDGQEVQRARQMFIHVQPKRLADE EEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHEEEECHHHHHHH MLRRYGLAGELQMSPRHLDDLDQPFSIALHGDLNQLALMPGPAAFAIPSLPNFGQIRSFA HHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCEECCCCCCHHHHHHHH DFVLQEKSKVFEGVCAGTRLEEHYRITLPADAHLLAIPPDVSVRVGEIAYQSTYHREGRT HHHHHHHHHHHHHHHCCCEECCCEEEEECCCCEEEEECCCCCEEECHHHEHHHHCCCCCE VDVTRVLDRNLGSNVCSGAKLAAWADAARSISKDLKRQILYR EEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLYAWVARNIRYVGVYFGAGPVVPHRADTVLANRYGDCKDQATLLSALLDAKGIESHTV CEEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEE LVNLGNRYRLPAVPDVLTFNHAIVWLPEFDVFADTTVGVLPFGALQFEASGKPALDTSTG EEECCCEEECCCCCCEEECCCEEEEEECCCCCCCCEECCCCCCEEEEECCCCCCCCCCCC QLIVTPPQNGHNSRSLLAYAVDLDRDGNATMTGDITLDGQEVQRARQMFIHVQPKRLADE EEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHEEEECHHHHHHH MLRRYGLAGELQMSPRHLDDLDQPFSIALHGDLNQLALMPGPAAFAIPSLPNFGQIRSFA HHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCEECCCCCCHHHHHHHH DFVLQEKSKVFEGVCAGTRLEEHYRITLPADAHLLAIPPDVSVRVGEIAYQSTYHREGRT HHHHHHHHHHHHHHHCCCEECCCEEEEECCCCEEEEECCCCCEEECHHHEHHHHCCCCCE VDVTRVLDRNLGSNVCSGAKLAAWADAARSISKDLKRQILYR EEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA