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The map label for this gene is hofB [C]

Identifier: 78066133

GI number: 78066133

Start: 1654382

End: 1655725

Strand: Direct

Name: hofB [C]

Synonym: Bcep18194_A4663

Alternate gene names: 78066133

Gene position: 1654382-1655725 (Clockwise)

Preceding gene: 78066132

Following gene: 78066134

Centisome position: 44.78

GC content: 64.06

Gene sequence:

>1344_bases
ATGGCACACGACATTCAATTTGCCGACGGCGCAGCGCCGTTCTCGCAGACGCAACAGTTCCACGACATCAAGAATGCCGC
GCACGAGCATTTGCTCACGCGGATCGAGGAGCTGGGTGCGGAATTCGGCCGTTGGTCGCGGCAGGCGATCAACCAGTTCG
TCGATCTCGAGATTGACAGCTTCGTGCGGTTGCGTCGGATCCCGCTCAACGAGAGCGAGGTGCGCGCGGTTGCCGAGGCG
CTGACGAAGGAACTCGCCGGCTTCGGGCCGATCGAGGACCTGCTGGCGGACCCGCACGTCGAGGACATCCTGATCAACGG
ATACAACGACATCTATGTGTCGCGGCACGGGATTCTGTCGAGGCTGCCGATCCGCTTCACCGATAACGCCCATCTGCTGC
GGATCGTGCGACGGATTCTCGCGCCGGTCGGCCGGCGGCTCGACGAATCGAATCCGATGGTCGATGCGCGGCTGCCCGAC
GGCGGGCGTGTCAACGTCGTCATCGAGCCGCTGTCGATCGACGGCCCGGTCGTATCGATCCGGAAGTTCCGCAAGGACCC
GCTGAAACCCGAGGATCTGCTGGGCAACGGCACCTTCAACGAGGAAATCGGGCGGCTGCTCGAGGCTGCGGTCGAGGCGC
GCTGCAACATCCTCGTGTCGGGCGGTACCAGTTCGGGCAAGACGTCGCTGCTGAATGCGCTGGCGTTCCACATCCCCATG
GTGGAGCGCGTCGTGACGATCGAGGATACGGCTGAGCTGTCGCTGAATCACCCGCACGTCGTACGGCTCGAGAGTCGCCC
CGGCGGCTTCGACGGCAGCGGTGTCGTGACGATTCGCGACCTGCTGCGCAACACGTTGCGGATGCGGCCGGACCGGATCA
TCGTCGGCGAAGTGCGCGGCGGTGAAGTGCTCGAAATGCTGCAGGCGATGAATACGGGCCACGACGGATCGATGGGCACC
GTGCACGCGAGTTCGCCGCGCGAGTGTCTGTACCGGCTCGAGATGCTTGCCGGCTTCGCCGGCTTTCAAGGCACCGAGGC
AAGTCTGCGTCGGCAGATCGCCAACGCGATCGATTTCATCGTGCAGATCGGCCGGCTGTCAAACGGCCGCCGGCGCATCC
TGTCGATCACCGAAGTCACCGGCATGTCGGACAACATCGTATCGACGCAGGAGCTGTATCGCTACGAGGCACGCGTCACG
CCAGAGGGCGACGAGATCGATCATTGGGAGTCGCTCGGCATTCATCCGCATTCGCCGAAGCTTGCACGCTTCCGCAACAC
GCTTGTGTCGAGCGGCGGCGGGTTTGGCGGCAACTTCGGGCGAGGCGGGGGCTTCAATGTCTAG

Upstream 100 bases:

>100_bases
CCTCGCGGGCGCACCGGCGCCCGGGGCGGCACAGCGTGCTGCGGGCGGCCTGTCGGCACTCAAGCGAATCATTCAATCCT
CTACGAAGCGGTCGTAAGCG

Downstream 100 bases:

>100_bases
CGCCACCCTGCTGGCGCTGATGTTCGCGCTGATCTGCGCGGCGGCCGGGTTGCTGCTGTGGCGCGGAAGCCAGGTCCGCG
AAGGGCGCGCCCATACGCAG

Product: Flp pilus assembly protein ATPase CpaF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDSFVRLRRIPLNESEVRAVAEA
LTKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILSRLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPD
GGRVNVVIEPLSIDGPVVSIRKFRKDPLKPEDLLGNGTFNEEIGRLLEAAVEARCNILVSGGTSSGKTSLLNALAFHIPM
VERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
VHASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVT
PEGDEIDHWESLGIHPHSPKLARFRNTLVSSGGGFGGNFGRGGGFNV

Sequences:

>Translated_447_residues
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDSFVRLRRIPLNESEVRAVAEA
LTKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILSRLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPD
GGRVNVVIEPLSIDGPVVSIRKFRKDPLKPEDLLGNGTFNEEIGRLLEAAVEARCNILVSGGTSSGKTSLLNALAFHIPM
VERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
VHASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVT
PEGDEIDHWESLGIHPHSPKLARFRNTLVSSGGGFGGNFGRGGGFNV
>Mature_446_residues
AHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDSFVRLRRIPLNESEVRAVAEAL
TKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILSRLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPDG
GRVNVVIEPLSIDGPVVSIRKFRKDPLKPEDLLGNGTFNEEIGRLLEAAVEARCNILVSGGTSSGKTSLLNALAFHIPMV
ERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGTV
HASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVTP
EGDEIDHWESLGIHPHSPKLARFRNTLVSSGGGFGGNFGRGGGFNV

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 49360; Mature: 49229

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FVRLRRIPLNESEVRAVAEALTKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILS
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHEEECCCCEEEEECCCHHH
RLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPDGGRVNVVIEPLSIDGPVVSI
HCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHH
RKFRKDPLKPEDLLGNGTFNEEIGRLLEAAVEARCNILVSGGTSSGKTSLLNALAFHIPM
HHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
VERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRG
HHHEEEEECCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
GEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFI
CHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVTPEGDEIDHWESLGIHPHSPK
HHHHHCCCCCHHEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCH
LARFRNTLVSSGGGFGGNFGRGGGFNV
HHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FVRLRRIPLNESEVRAVAEALTKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILS
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHEEECCCCEEEEECCCHHH
RLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPDGGRVNVVIEPLSIDGPVVSI
HCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHH
RKFRKDPLKPEDLLGNGTFNEEIGRLLEAAVEARCNILVSGGTSSGKTSLLNALAFHIPM
HHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
VERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRG
HHHEEEEECCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
GEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFI
CHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVTPEGDEIDHWESLGIHPHSPK
HHHHHCCCCCHHEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCH
LARFRNTLVSSGGGFGGNFGRGGGFNV
HHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]