| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066132
Identifier: 78066132
GI number: 78066132
Start: 1653140
End: 1654378
Strand: Direct
Name: 78066132
Synonym: Bcep18194_A4662
Alternate gene names: NA
Gene position: 1653140-1654378 (Clockwise)
Preceding gene: 78066131
Following gene: 78066133
Centisome position: 44.75
GC content: 67.07
Gene sequence:
>1239_bases ATGAATGCGAGAACCTATTCTTTGGCTGAGCCCGCCGTCACCGACCTCTTCGTATGCGCATCGTCGCTTGCGGAGCACGT GCAATGGCTGTCCCAGTCGCTGGTCTCGGCTGGCGCGGTCGAGGGGGCACCGCTGGAAGGTGCGGCGCTGTCGCAGCGCA TCGGTGTACTGAATCCGGCGCTGGTATTCATCGATTTTTCGGGTGATTGCGCCGCGGCGAGCACGGTAGTCGCCGCCGTG CGCCTGTCTCATCCGGGCGTGCCGGTCGTTGCGCTGGGCTCGCTCGCGCAACCGGAGGGGGCGCTCGCCGCGCTGCGCGC GGGTGTCCGCGATTTCGTCGATTTTTCCGCACCGGCCGATGAGGCGCTGCGCATCACGCGCGTGCTGCTCGACAACGTCG GCGAGCCGGCGAACCGCCACGGGAAGGTCACCGCGTTGCTCGGCGCGCGCGCCGGGATGGGCGTGAGTACGTTGGCCGCG AACTTGTCGGTGCTGATGCAGAGGCGGCCCGCCGATCCTGCTCACGCGGCTGCGCTCCTCGATCTCGGGTTGCCGGCCGG CGACGGCGCGCTGTTCCTGAACACGCGCTGCGAATTTCATTTCGTCGAGGCCGTGCGCAACCTGCGCCGGATCGATCGCA CGTTCGTGACAACTGCGCTCGCTCGCCATGCAAGCGGCGTCGCGCTGACCACGCTGCCGCCGAACCTCGCCGATCTGCGC GAAGTGGCAACGGCGTCGTGCGCGGCGTTGTTGAACCGGCTGCGTGCATTTTTCGATCACCAGATCGTCGATCTCGGCGG TTTCCCGAATCGGGAATTCATTGCGCAGGTCGTGAATCTTGCCGACGAAGCATGGCTCGTTTGCGACCAGGGCGTGGCGT CGGTCGTATCGGCGATCGAGATGCTGGACGGCTTGCGCGATGCGGGCGCCACGACCGAACGGATCAGGCTCGTGGTCAAC CAGTTCGACGCCGAGCTCGGGCTGATGCCCGCGCAGATTGCCGAACGGCTTGATCTGTCGTTGCTTGCGACGCTGCCGTC ACGGCGCGTGTCGATCGGGCATGCGGCGAACCAGGGCAAGCTGATTGCCGAGGTCGCGGAACGCGATCCGTACGTGCGTG CGCTCGGGCCGCTGGTCGAGCGCCTCGCGGGCGCACCGGCGCCCGGGGCGGCACAGCGTGCTGCGGGCGGCCTGTCGGCA CTCAAGCGAATCATTCAATCCTCTACGAAGCGGTCGTAA
Upstream 100 bases:
>100_bases TGCAGGGCCGGGGTTCTCGAAATGAGCGCGCCGAATCATGACGGGACAGCGCAGGCGGTCGCGCACGACGCGACGCCTTG CTTCATTGTGAGTATCCAAA
Downstream 100 bases:
>100_bases GCGATGGCACACGACATTCAATTTGCCGACGGCGCAGCGCCGTTCTCGCAGACGCAACAGTTCCACGACATCAAGAATGC CGCGCACGAGCATTTGCTCA
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Pilus Assembly Protein CpaE; Pilus Assembly Protein; Response Receiver Involved In Pilum Assembly; Flp Pilus Assembly ATPase; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Flp Pilus Assembly ATPase CpaE; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Fimbriae Assembly Protein; Response Regulator; Flp Pilus Assembly Protein ATPase CpaE-Like; Pilus Assembly Protein CpaE-Like Protein; Septum Site-Determining Protein; Pilus Assembly Protein CpaE-Like; Flp Pilus Assembly Protein ATPase; Type II Secretion System Protein; Flp Pilus Assembly Protein ATPase CpaE
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNARTYSLAEPAVTDLFVCASSLAEHVQWLSQSLVSAGAVEGAPLEGAALSQRIGVLNPALVFIDFSGDCAAASTVVAAV RLSHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPADEALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAA NLSVLMQRRPADPAHAAALLDLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHASGVALTTLPPNLADLR EVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAIEMLDGLRDAGATTERIRLVVN QFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGKLIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSA LKRIIQSSTKRS
Sequences:
>Translated_412_residues MNARTYSLAEPAVTDLFVCASSLAEHVQWLSQSLVSAGAVEGAPLEGAALSQRIGVLNPALVFIDFSGDCAAASTVVAAV RLSHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPADEALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAA NLSVLMQRRPADPAHAAALLDLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHASGVALTTLPPNLADLR EVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAIEMLDGLRDAGATTERIRLVVN QFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGKLIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSA LKRIIQSSTKRS >Mature_412_residues MNARTYSLAEPAVTDLFVCASSLAEHVQWLSQSLVSAGAVEGAPLEGAALSQRIGVLNPALVFIDFSGDCAAASTVVAAV RLSHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPADEALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAA NLSVLMQRRPADPAHAAALLDLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHASGVALTTLPPNLADLR EVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAIEMLDGLRDAGATTERIRLVVN QFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGKLIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSA LKRIIQSSTKRS
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43103; Mature: 43103
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARTYSLAEPAVTDLFVCASSLAEHVQWLSQSLVSAGAVEGAPLEGAALSQRIGVLNPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCE LVFIDFSGDCAAASTVVAAVRLSHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPAD EEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHH EALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAANLSVLMQRRPADPAHAAALL HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH DLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHASGVALTTLPPNLADLR HCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH EVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAIE HHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH MLDGLRDAGATTERIRLVVNQFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGK HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCH LIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSALKRIIQSSTKRS HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNARTYSLAEPAVTDLFVCASSLAEHVQWLSQSLVSAGAVEGAPLEGAALSQRIGVLNPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCE LVFIDFSGDCAAASTVVAAVRLSHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPAD EEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHH EALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAANLSVLMQRRPADPAHAAALL HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH DLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHASGVALTTLPPNLADLR HCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH EVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAIE HHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH MLDGLRDAGATTERIRLVVNQFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGK HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCH LIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSALKRIIQSSTKRS HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA