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The map label for this gene is hofQ [C]

Identifier: 78066131

GI number: 78066131

Start: 1651733

End: 1653064

Strand: Direct

Name: hofQ [C]

Synonym: Bcep18194_A4661

Alternate gene names: 78066131

Gene position: 1651733-1653064 (Clockwise)

Preceding gene: 78066130

Following gene: 78066132

Centisome position: 44.71

GC content: 64.34

Gene sequence:

>1332_bases
ATGAAAAAGAAACTGATTGGATTAGCTATTGCATTGAGCGCGCTGGCCATGCCGCCGCTGTCGGGCGCGGCCGACACGAG
CGGGACGATCAGCCTGGCGGTCGGCGCACAACGGCAGCTCGCGACGGGGCGTGCGCTGCAGCGGGTTGCGGTCGGCGATC
CGTCGGTCGCCGACGTGATGGTCGTGAAGGGCGGGCGTGGCGGTGTCCTGCTGATAGCGAAGAGCGCCGGCGCGACGAAC
GTGATGATCTGGGAGCGCGGTCACGACGAACCGACCGTCTACAACGTGAGCGTCACGAGCGGCGCGGCGCGTGCGTTGCT
TGACGGTGGGACGTCGAGCGTGAATACGTACGGCGGCACGACGGTGATCGGCGGTGCGTCCGGGTCGCTCGACGGGCATC
AGCGGGCGGTTCATGCGGCGAAGACGGTCAGCGGCAAGGACGGGACGACGATCGATGCGTCGACGATCTCCGGCAAGAAC
GTCGTGCAGGTCGATGTGCGCGTCGTCGAATTCAGCCGTTCGGTGCTGAAGCAGGCAGGGCTGAACTTCTTCAAGCAAAG
CAACGGTTTTTCGTTCGGTGCCTTCGCGCCGACCGGGCTCACGTCGATTACCGGTTCGCCGGGCGGTGCGCTTACGTACA
ACACGAACGTGCCCATTTCGTCAGCGTTCAATCTGGTCGTCAATTCGGTGTCGCACGGGTTGTTCGCCGATCTGTCGATC
CTCGAAGCCAACAATCTCGCCCGCGTGCTGGCACAGCCGACGCTCGTCGCGTTGTCCGGCCAGAGCGCGAATTTCCTGGC
GGGTGGTGAAATTCCGGTGCCGGTGCCGCAATCGCTGGGCACGATCTCGATCGAATGGAAGCCTTACGGCGTGGGGCTGA
CCGTCACGCCGACCGTGTTGAACCCGCGCCGGATCGCGCTGAAGGTCGCGCCCGAGTCGAGCCAGCTCGACTTCGTGCAC
TCGATCACGATCAACGGTGTTCAGGTGCCCGCGCTGACGACCCGGCGCGCGGATACGACGGTCGAGCTCGGCGATGGCGA
AAGCTTCGTGATCGGCGGTTTGATCGATCGCGAGACGACCTCGAACGTCAACAAGGTGCCGTTCCTGGGCGATCTGCCCA
TCATCGGCGCGTTTTTCAAGAATTTGAGCTATCAGCAGAGCGACAAGGAACTCGTGATCATCGTAACGCCGCATCTCGTT
GCGCCGATCGCGCAGGGCGCGTCGCTGCCGGCGACTCCGGGAGAACTGTCCGAGCAGCGCGACGGCCCCGTGTGGCGTTC
CTATCTGGGCGGCATGGCGTCGCCGGATGCAGGGCCGGGGTTCTCGAAATGA

Upstream 100 bases:

>100_bases
ATCGAAGTGATTCGCGGCGGGCGGGCCGAGATGGTCGCCTATTGAGAGCGGGACAAAGACGACAACCAGAGAAGGGGGGC
GGTTCGATGCCTCCGAAACA

Downstream 100 bases:

>100_bases
GCGCGCCGAATCATGACGGGACAGCGCAGGCGGTCGCGCACGACGCGACGCCTTGCTTCATTGTGAGTATCCAAAATGAA
TGCGAGAACCTATTCTTTGG

Product: Flp pilus assembly protein secretin CpaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKKKLIGLAIALSALAMPPLSGAADTSGTISLAVGAQRQLATGRALQRVAVGDPSVADVMVVKGGRGGVLLIAKSAGATN
VMIWERGHDEPTVYNVSVTSGAARALLDGGTSSVNTYGGTTVIGGASGSLDGHQRAVHAAKTVSGKDGTTIDASTISGKN
VVQVDVRVVEFSRSVLKQAGLNFFKQSNGFSFGAFAPTGLTSITGSPGGALTYNTNVPISSAFNLVVNSVSHGLFADLSI
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVLNPRRIALKVAPESSQLDFVH
SITINGVQVPALTTRRADTTVELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQSDKELVIIVTPHLV
APIAQGASLPATPGELSEQRDGPVWRSYLGGMASPDAGPGFSK

Sequences:

>Translated_443_residues
MKKKLIGLAIALSALAMPPLSGAADTSGTISLAVGAQRQLATGRALQRVAVGDPSVADVMVVKGGRGGVLLIAKSAGATN
VMIWERGHDEPTVYNVSVTSGAARALLDGGTSSVNTYGGTTVIGGASGSLDGHQRAVHAAKTVSGKDGTTIDASTISGKN
VVQVDVRVVEFSRSVLKQAGLNFFKQSNGFSFGAFAPTGLTSITGSPGGALTYNTNVPISSAFNLVVNSVSHGLFADLSI
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVLNPRRIALKVAPESSQLDFVH
SITINGVQVPALTTRRADTTVELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQSDKELVIIVTPHLV
APIAQGASLPATPGELSEQRDGPVWRSYLGGMASPDAGPGFSK
>Mature_443_residues
MKKKLIGLAIALSALAMPPLSGAADTSGTISLAVGAQRQLATGRALQRVAVGDPSVADVMVVKGGRGGVLLIAKSAGATN
VMIWERGHDEPTVYNVSVTSGAARALLDGGTSSVNTYGGTTVIGGASGSLDGHQRAVHAAKTVSGKDGTTIDASTISGKN
VVQVDVRVVEFSRSVLKQAGLNFFKQSNGFSFGAFAPTGLTSITGSPGGALTYNTNVPISSAFNLVVNSVSHGLFADLSI
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVLNPRRIALKVAPESSQLDFVH
SITINGVQVPALTTRRADTTVELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQSDKELVIIVTPHLV
APIAQGASLPATPGELSEQRDGPVWRSYLGGMASPDAGPGFSK

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=166, Percent_Identity=34.9397590361446, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87082242, Length=238, Percent_Identity=29.8319327731092, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 45489; Mature: 45489

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLIGLAIALSALAMPPLSGAADTSGTISLAVGAQRQLATGRALQRVAVGDPSVADVM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCCCEEEE
VVKGGRGGVLLIAKSAGATNVMIWERGHDEPTVYNVSVTSGAARALLDGGTSSVNTYGGT
EEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCHHHHCCCCCCCEECCCCE
TVIGGASGSLDGHQRAVHAAKTVSGKDGTTIDASTISGKNVVQVDVRVVEFSRSVLKQAG
EEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEHHHHHHHHHHC
LNFFKQSNGFSFGAFAPTGLTSITGSPGGALTYNTNVPISSAFNLVVNSVSHGLFADLSI
CHHEECCCCCEEECCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVL
EECCCHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECEEEECCEE
NPRRIALKVAPESSQLDFVHSITINGVQVPALTTRRADTTVELGDGESFVIGGLIDRETT
CCEEEEEEECCCCCCEEEEEEEEECCEEECEEEECCCCCEEEECCCCEEEEEEEECCCCC
SNVNKVPFLGDLPIIGAFFKNLSYQQSDKELVIIVTPHLVAPIAQGASLPATPGELSEQR
CCCCCCCEECCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCHHHCC
DGPVWRSYLGGMASPDAGPGFSK
CCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKKLIGLAIALSALAMPPLSGAADTSGTISLAVGAQRQLATGRALQRVAVGDPSVADVM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCCCEEEE
VVKGGRGGVLLIAKSAGATNVMIWERGHDEPTVYNVSVTSGAARALLDGGTSSVNTYGGT
EEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCHHHHCCCCCCCEECCCCE
TVIGGASGSLDGHQRAVHAAKTVSGKDGTTIDASTISGKNVVQVDVRVVEFSRSVLKQAG
EEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEHHHHHHHHHHC
LNFFKQSNGFSFGAFAPTGLTSITGSPGGALTYNTNVPISSAFNLVVNSVSHGLFADLSI
CHHEECCCCCEEECCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVL
EECCCHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECEEEECCEE
NPRRIALKVAPESSQLDFVHSITINGVQVPALTTRRADTTVELGDGESFVIGGLIDRETT
CCEEEEEEECCCCCCEEEEEEEEECCEEECEEEECCCCCEEEECCCCEEEEEEEECCCCC
SNVNKVPFLGDLPIIGAFFKNLSYQQSDKELVIIVTPHLVAPIAQGASLPATPGELSEQR
CCCCCCCEECCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCHHHCC
DGPVWRSYLGGMASPDAGPGFSK
CCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]