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The map label for this gene is yhcM [H]

Identifier: 78066122

GI number: 78066122

Start: 1641351

End: 1642502

Strand: Direct

Name: yhcM [H]

Synonym: Bcep18194_A4652

Alternate gene names: 78066122

Gene position: 1641351-1642502 (Clockwise)

Preceding gene: 78066121

Following gene: 78066123

Centisome position: 44.43

GC content: 63.02

Gene sequence:

>1152_bases
ATGACGAGGGCGGGCGGGATTTCCCGTCCGCCTTCGTTTTTTCCGGTTTGCCCGATGAACGTCACCGAATACTACACGCG
CGAATTGACCACGCGCGGCTATCAGTCCGATCCCGCGCAGCGCGCGGCCGTCGATCGCCTGCAGCAATGCTTCGACGAGT
GGGTCGAGTACAAGGCGCGTCGCTCGAACGCGTTCAAGAAGCTCATCAATCATCCCGACCTCCCGCGCGGCGTCTACATG
TGGGGCGGTGTCGGTCGCGGCAAGAGCTTCCTGATGGACAGCTTCTACGCGGTCGTGCCCGTGCAGCGCAAGACGCGCCT
GCATTTCCACGAATTCATGCGCGAAGTGCACCGCGAGCTCGAGGAACTGAAAGGGCAGGCCGATCCGCTCGACGAACTCG
CACGGCGCATCGCGAAGCGCTACCGGCTGATCTGCTTCGACGAGTTCCACGTGTCGGACATTGCCGATGCGATGATCCTG
TACCGTCTGCTCGACCGCCTGTTCAACAACGGCGTGCAGTTCGTGATGACGTCCAACTACGATCCCGACGACCTGTATCC
GGACGGCCTGCATCGCGACCGTATGCTGCCGGCAATCGCGTTGATCAAGTCCAGGCTCGATGTGCTCAACGTCGACGCGG
GCGTCGATTATCGCCAGCGCACGCTCGCTCAGGTGAAGATGTATCACACGCCGCTCGGCGCGGATGCCGATCGCGAATTG
CGGCATGCGTTCCAGAAGCTCGCTGCCGTTCCCGATGAAAGCCCGCTCCTGCATATCGAGAAGCGCGAGCTGAAGGCGCT
GCGCAAGGCGGACGGCGTCGTATGGTTCGACTTCGCGACGCTGTGCGGCGGCCCGCGCTCGCAGAACGACTATCTCGAGC
TCGCGAGCCGCTTCCACGCGATCGTGCTGTCCGAGGTGCCGCAGATGTCGCCGCGGATGGCGTCCGAGGCGCGCCGCTTC
ACGTGGCTCATCGACGTGCTGTACGACCACAAGGTCAAGCTGCTGATGTCCGCGGCGGTGCCGGCGGAGCAGTTGTACGT
CGAAGGCCCGATGGCCAACGAGTTTGCGCGTACGGTCTCGCGAATCGTCGAGATGCAGTCGAAGGAATACATCGAAACGC
CGCGCCGCATCGTCGATACGTCGTTGACCTGA

Upstream 100 bases:

>100_bases
CGGAAGTGATGCGCGAAGCGGCGCTCGCCGTCGACAAGCGCTCGCTGAACAGCTGAGCGCGGTGTAGCGCCGGCCGGCAA
TCGGCCAGCGCAGCCGTCTC

Downstream 100 bases:

>100_bases
GTGCGATTTCCGGCAATTGACGGGATTCAAACGTCAATTCCGGTCAAATTAAGGCAATCTCGGGGTATTTTCGGATTTGT
CTTATATTCATTGTTGAGGT

Product: AFG1-like ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTRAGGISRPPSFFPVCPMNVTEYYTRELTTRGYQSDPAQRAAVDRLQQCFDEWVEYKARRSNAFKKLINHPDLPRGVYM
WGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMIL
YRLLDRLFNNGVQFVMTSNYDPDDLYPDGLHRDRMLPAIALIKSRLDVLNVDAGVDYRQRTLAQVKMYHTPLGADADREL
RHAFQKLAAVPDESPLLHIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEARRF
TWLIDVLYDHKVKLLMSAAVPAEQLYVEGPMANEFARTVSRIVEMQSKEYIETPRRIVDTSLT

Sequences:

>Translated_383_residues
MTRAGGISRPPSFFPVCPMNVTEYYTRELTTRGYQSDPAQRAAVDRLQQCFDEWVEYKARRSNAFKKLINHPDLPRGVYM
WGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMIL
YRLLDRLFNNGVQFVMTSNYDPDDLYPDGLHRDRMLPAIALIKSRLDVLNVDAGVDYRQRTLAQVKMYHTPLGADADREL
RHAFQKLAAVPDESPLLHIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEARRF
TWLIDVLYDHKVKLLMSAAVPAEQLYVEGPMANEFARTVSRIVEMQSKEYIETPRRIVDTSLT
>Mature_382_residues
TRAGGISRPPSFFPVCPMNVTEYYTRELTTRGYQSDPAQRAAVDRLQQCFDEWVEYKARRSNAFKKLINHPDLPRGVYMW
GGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILY
RLLDRLFNNGVQFVMTSNYDPDDLYPDGLHRDRMLPAIALIKSRLDVLNVDAGVDYRQRTLAQVKMYHTPLGADADRELR
HAFQKLAAVPDESPLLHIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEARRFT
WLIDVLYDHKVKLLMSAAVPAEQLYVEGPMANEFARTVSRIVEMQSKEYIETPRRIVDTSLT

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=385, Percent_Identity=35.8441558441558, Blast_Score=231, Evalue=6e-61,
Organism=Escherichia coli, GI1789627, Length=363, Percent_Identity=44.0771349862259, Blast_Score=289, Evalue=3e-79,
Organism=Caenorhabditis elegans, GI17505769, Length=414, Percent_Identity=30.6763285024155, Blast_Score=203, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6320783, Length=321, Percent_Identity=34.8909657320872, Blast_Score=174, Evalue=2e-44,
Organism=Drosophila melanogaster, GI20129913, Length=348, Percent_Identity=34.1954022988506, Blast_Score=191, Evalue=8e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 44307; Mature: 44176

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAGGISRPPSFFPVCPMNVTEYYTRELTTRGYQSDPAQRAAVDRLQQCFDEWVEYKAR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RSNAFKKLINHPDLPRGVYMWGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHREL
HHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFNNGVQFVMTSNY
HHHCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
DPDDLYPDGLHRDRMLPAIALIKSRLDVLNVDAGVDYRQRTLAQVKMYHTPLGADADREL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHH
RHAFQKLAAVPDESPLLHIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHA
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHH
IVLSEVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSAAVPAEQLYVEGPMANEFARTVS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHH
RIVEMQSKEYIETPRRIVDTSLT
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRAGGISRPPSFFPVCPMNVTEYYTRELTTRGYQSDPAQRAAVDRLQQCFDEWVEYKAR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RSNAFKKLINHPDLPRGVYMWGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHREL
HHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFNNGVQFVMTSNY
HHHCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
DPDDLYPDGLHRDRMLPAIALIKSRLDVLNVDAGVDYRQRTLAQVKMYHTPLGADADREL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHH
RHAFQKLAAVPDESPLLHIEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHA
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHH
IVLSEVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSAAVPAEQLYVEGPMANEFARTVS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHH
RIVEMQSKEYIETPRRIVDTSLT
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]