Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is 78066052

Identifier: 78066052

GI number: 78066052

Start: 1555868

End: 1557229

Strand: Direct

Name: 78066052

Synonym: Bcep18194_A4581

Alternate gene names: NA

Gene position: 1555868-1557229 (Clockwise)

Preceding gene: 78066051

Following gene: 78066053

Centisome position: 42.12

GC content: 70.56

Gene sequence:

>1362_bases
GTGACGACGGGAATCACGCAGCGCACGGCGAACCTGCGCACGGTAGCGCTGCGCGCAGCCTGCGCGGTCGCGTTTGCGTT
CGCCGCACAGCATGCGGCTGCCCAGCCGCCTGCGGCGGCGGGCAAGATGGTCGTCTACCGTACGCAGGCGGGCGACACGC
TGTACGACGTCGCCGCGCGCTACCTGCAGGGCGCGGACGACTGGCAACTGCTTCAGAAGATCAACGGCGTGCCCGCGCCG
AAGCACCTGCAGCCCGGCATCGCGCTGAAGCTGCCGGTGGCGCGCCTGCGCAAGGAAAAGCTGACCGCCCGCGTCATCGC
GGTGCAGGGCACGGCCGAACGCGCGTCCGGCGACGCTTACGCGCCGCTCGCGAACGACGCGACGCTCGCCGAGGGCGATC
GCGTGCGCACGGGCCCGAACGGCTTCGTGACACTCGAGCTCGCCGACGGCACGCACATGAGCCTGCCGCCCGACAGCCAG
CTCGACCTGAAGGCGCTGCGCCGCACGGTGCTGACCGGCACGCTCGATCGTGAGTTCGAACTCAGGCGCGGCTCGGTCGA
CAGCGAAGTCACCCATCTGAAGAAACGCGATGACCGCTTCCAGATCCGGTCGCCGTCGGTCGTGGCCGGTGTGCGCGGCA
CGCACTTCCGCGTGAATTACGATGCGGCTGGCAACGCGTCGACGCGCGTCGAAGTGCTCGACGGCACCGTCGGTGTCGCG
GGCGACCGCCAGCCGGCCGGCCCGACGCTCGTGCATGCGAATTTCGGCAGCGTCGCGACATCGTCCGGCGCGGTCGGCGC
GCCCGTCGAGCTGCTGCCCGCACCGGCGCTCGCGCATCCCGACAAGGTGCAGGACGAGCCCGACGTCGCATTCGACGTTG
CACCGCTCGCCCAGGCGCAGGCATACCGCGTCCAGCTCGCGCACGACGCCGGGCTGCTCGACCTGTTCCGCGAAACGCGC
ACCGGTTCGCCGCGCGCGGTCTTCCGCGACGTGCCGAACGGGAACTACTTCGTGCGGGTCGCCGCGATCGATGCGAACGG
CCTCGAGGGCCGGCCGCGTACGTACGCGTTCGAACGCCGCATGATGGGGCTCGACGCGAGCGCGTCGCCCGGTGCCGGCG
GCTACGAGTTCCGCTGGTCGCCGAACGGTTCGGGCAAGGATGCGCGCTACCGGTTCGTGCTGTCGCGCTCGAAGGACCTG
AGTGCGCCGGTCGTCGACCAGGTCGGCCTGCATACGCGCCAGATCACCGTCGCGCACCTGCCGCCGGGCGACTATTTCTG
GGCCGTGACCGTCGAGGAGTTCGAAGGCGGCAAGTTCTACGAGAAGACCAGTCCGGTCAGCGCGTTCACGCTGTCGCGCT
GA

Upstream 100 bases:

>100_bases
TGCGCACCAAGCTCGGCCTGCGGCCCGAAAACGGCTATCGCCTTGCGCCGATCTACGGGTACGGCTACCGGCTCGAGCGG
GTCGGCCAGGGAGAACCGGA

Downstream 100 bases:

>100_bases
TTCGCGGCGCATGAAACCCGACTCCGTTTCTCCACGGCGGCGCCTCGGCCGCCGATTCCTGATCGAATGGATCGCGATCG
GCTGCCTCGGGGTCGCCGTG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: FecR Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein; LysM Domain Protein

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTTGITQRTANLRTVALRAACAVAFAFAAQHAAAQPPAAAGKMVVYRTQAGDTLYDVAARYLQGADDWQLLQKINGVPAP
KHLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGDAYAPLANDATLAEGDRVRTGPNGFVTLELADGTHMSLPPDSQ
LDLKALRRTVLTGTLDREFELRRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTHFRVNYDAAGNASTRVEVLDGTVGVA
GDRQPAGPTLVHANFGSVATSSGAVGAPVELLPAPALAHPDKVQDEPDVAFDVAPLAQAQAYRVQLAHDAGLLDLFRETR
TGSPRAVFRDVPNGNYFVRVAAIDANGLEGRPRTYAFERRMMGLDASASPGAGGYEFRWSPNGSGKDARYRFVLSRSKDL
SAPVVDQVGLHTRQITVAHLPPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR

Sequences:

>Translated_453_residues
MTTGITQRTANLRTVALRAACAVAFAFAAQHAAAQPPAAAGKMVVYRTQAGDTLYDVAARYLQGADDWQLLQKINGVPAP
KHLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGDAYAPLANDATLAEGDRVRTGPNGFVTLELADGTHMSLPPDSQ
LDLKALRRTVLTGTLDREFELRRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTHFRVNYDAAGNASTRVEVLDGTVGVA
GDRQPAGPTLVHANFGSVATSSGAVGAPVELLPAPALAHPDKVQDEPDVAFDVAPLAQAQAYRVQLAHDAGLLDLFRETR
TGSPRAVFRDVPNGNYFVRVAAIDANGLEGRPRTYAFERRMMGLDASASPGAGGYEFRWSPNGSGKDARYRFVLSRSKDL
SAPVVDQVGLHTRQITVAHLPPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR
>Mature_452_residues
TTGITQRTANLRTVALRAACAVAFAFAAQHAAAQPPAAAGKMVVYRTQAGDTLYDVAARYLQGADDWQLLQKINGVPAPK
HLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGDAYAPLANDATLAEGDRVRTGPNGFVTLELADGTHMSLPPDSQL
DLKALRRTVLTGTLDREFELRRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTHFRVNYDAAGNASTRVEVLDGTVGVAG
DRQPAGPTLVHANFGSVATSSGAVGAPVELLPAPALAHPDKVQDEPDVAFDVAPLAQAQAYRVQLAHDAGLLDLFRETRT
GSPRAVFRDVPNGNYFVRVAAIDANGLEGRPRTYAFERRMMGLDASASPGAGGYEFRWSPNGSGKDARYRFVLSRSKDLS
APVVDQVGLHTRQITVAHLPPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48605; Mature: 48474

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGITQRTANLRTVALRAACAVAFAFAAQHAAAQPPAAAGKMVVYRTQAGDTLYDVAAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHH
YLQGADDWQLLQKINGVPAPKHLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGDAY
HHCCCCHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHCCEEEEEEEECCHHHCCCCEE
APLANDATLAEGDRVRTGPNGFVTLELADGTHMSLPPDSQLDLKALRRTVLTGTLDREFE
CCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
LRRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTHFRVNYDAAGNASTRVEVLDGTVGVA
CCCCCCCHHHHHHHHCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEEECEEECC
GDRQPAGPTLVHANFGSVATSSGAVGAPVELLPAPALAHPDKVQDEPDVAFDVAPLAQAQ
CCCCCCCCEEEEECCCCEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECHHHCCC
AYRVQLAHDAGLLDLFRETRTGSPRAVFRDVPNGNYFVRVAAIDANGLEGRPRTYAFERR
EEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHH
MMGLDASASPGAGGYEFRWSPNGSGKDARYRFVLSRSKDLSAPVVDQVGLHTRQITVAHL
HHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEEEEEC
PPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR
CCCCEEEEEEEEECCCCEEEECCCCCCEEEECC
>Mature Secondary Structure 
TTGITQRTANLRTVALRAACAVAFAFAAQHAAAQPPAAAGKMVVYRTQAGDTLYDVAAR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHH
YLQGADDWQLLQKINGVPAPKHLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGDAY
HHCCCCHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHCCEEEEEEEECCHHHCCCCEE
APLANDATLAEGDRVRTGPNGFVTLELADGTHMSLPPDSQLDLKALRRTVLTGTLDREFE
CCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
LRRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTHFRVNYDAAGNASTRVEVLDGTVGVA
CCCCCCCHHHHHHHHCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEEECEEECC
GDRQPAGPTLVHANFGSVATSSGAVGAPVELLPAPALAHPDKVQDEPDVAFDVAPLAQAQ
CCCCCCCCEEEEECCCCEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECHHHCCC
AYRVQLAHDAGLLDLFRETRTGSPRAVFRDVPNGNYFVRVAAIDANGLEGRPRTYAFERR
EEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHH
MMGLDASASPGAGGYEFRWSPNGSGKDARYRFVLSRSKDLSAPVVDQVGLHTRQITVAHL
HHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEEEEEC
PPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR
CCCCEEEEEEEEECCCCEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA