| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is hexR [C]
Identifier: 78066046
GI number: 78066046
Start: 1550347
End: 1551306
Strand: Direct
Name: hexR [C]
Synonym: Bcep18194_A4575
Alternate gene names: 78066046
Gene position: 1550347-1551306 (Clockwise)
Preceding gene: 78066045
Following gene: 78066048
Centisome position: 41.97
GC content: 67.4
Gene sequence:
>960_bases ATGTATCCAGGTGAGCCCCGGGCCGCGTTCGTCAACCTCGCGCGCACGTCGGGGCCGTCAACTTCGCGCTATCCGATGAG TTCATCCGAGAAACCTCCCGCCACCGTCGAGCAGTTCCTGCAGCACCTGACGCAGGAGTACGACGGCCTCAGCAATCGCC TGAAGGTGATTGCGCGCCACGTGGAAACGCATCGGGACCAGCTTGGCCTGGAAGGCATCCAGTCGCTCGCGGAAGCGTGC GGCGTCCAGCCGTCGGCCGTCGTGCGTTTCGCGAAGCACTTCGGCTTTTCCGGCTTCTCCGAGATGCAGCGGCTGTTCCG CGAAGGGATCGCCCAGCAGATCGCGCCGGGACGCGCGTACAACCTGCGGCTGCGCGACGTGATCGAAGCGGGCTCGTCGA GCCTGCAGCCCGAGCAGATCGCCGACGAGTTCATCAAGGGCAGCATCGCCGGGATGCAGCAGCTGCGGCAAACGCTCGAT TCGCAGGCGCTCGCGCAGGCCGTCGACCTGCTCGCCGAGACGCAGGCGATCTGGATCGCGGGTTCGCGGCGCGCGTTTCC GATTGCCGTGTACCTCGACTATGCGCTGCAGCACACCGACAAGCGCATCGGCCTGTTCAGCGCGCTCGGCAGCATGCATC TCGGGCAGATCCGCTCGGTGCGCGAGGGCGACGTGATGATCGTCATCTCGTTCATGCCGTATGCGGAGGAAACGGTGCAG GTCGCGCAGCAGGCCGTGCAGCGCGGCGCGCGGCTGATCGCGATCACCGACAGCCGGATGAGCCCGCTGGCGCGGGAGGC CGAGGTGACGCTGATGGTGCAGGACAGCGCGACATTCGGCTTCCGCGCACTGACCGCCACGATGGGGCTTGCGCAGAGCC TGTTCGTCGCGCTCGCGTACCGGCTCGAACTGTCGTACCTGCCGACCGCCGACGGCGCGCACGGCACGAAGGCCGGCTGA
Upstream 100 bases:
>100_bases CAGTATTGCCGTGGAGCGTAGGCAAGTGATGATCGAGCGCGTGGGAGCGAGCACGCGGCGCGGGCCGCGCCGCAAACGTG TTTAAATTCGCCCTTCATGC
Downstream 100 bases:
>100_bases CGCATCCTGCCGGCGCACCGCCCGCGTGACAGCGCAGCGGGCGGCGTGCCGTCAGGCGGTTACTTCGCGGTCGGCATCGC GAATTCGGCACCCTTGCCGA
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain-Containing Protein; SIS Domain Protein; Transcriptional Regulator Protein; Sugar Isomerase; Transcriptional Regulator Rpir Family; Transcription Regulator Protein; SIS Family Regulator; Transcriptional Regulator RpiR Family Protein; N-Acetylmannosamine Kinase; N-Acylmannosamine Kinase; GlvR Family Transcriptional Regulator; RpiR-Family Transcriptional Regulator; Conserved Hypothethical Protein; RpiR Family Regulatory; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; Transcriptional Regulator RpiR Family SIS Domain; Transcription Regulator; RpiR Family Transcription Regulator Protein; Bifunctional Protein Glk; HTH/SIS Domain-Containing Protein; Sugar Isomerase Family Protein; Transcriptional Regulator IolR; Helix-Turn-Helix Domain RpiR Family
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MYPGEPRAAFVNLARTSGPSTSRYPMSSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARHVETHRDQLGLEGIQSLAEAC GVQPSAVVRFAKHFGFSGFSEMQRLFREGIAQQIAPGRAYNLRLRDVIEAGSSSLQPEQIADEFIKGSIAGMQQLRQTLD SQALAQAVDLLAETQAIWIAGSRRAFPIAVYLDYALQHTDKRIGLFSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQ VAQQAVQRGARLIAITDSRMSPLAREAEVTLMVQDSATFGFRALTATMGLAQSLFVALAYRLELSYLPTADGAHGTKAG
Sequences:
>Translated_319_residues MYPGEPRAAFVNLARTSGPSTSRYPMSSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARHVETHRDQLGLEGIQSLAEAC GVQPSAVVRFAKHFGFSGFSEMQRLFREGIAQQIAPGRAYNLRLRDVIEAGSSSLQPEQIADEFIKGSIAGMQQLRQTLD SQALAQAVDLLAETQAIWIAGSRRAFPIAVYLDYALQHTDKRIGLFSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQ VAQQAVQRGARLIAITDSRMSPLAREAEVTLMVQDSATFGFRALTATMGLAQSLFVALAYRLELSYLPTADGAHGTKAG >Mature_319_residues MYPGEPRAAFVNLARTSGPSTSRYPMSSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARHVETHRDQLGLEGIQSLAEAC GVQPSAVVRFAKHFGFSGFSEMQRLFREGIAQQIAPGRAYNLRLRDVIEAGSSSLQPEQIADEFIKGSIAGMQQLRQTLD SQALAQAVDLLAETQAIWIAGSRRAFPIAVYLDYALQHTDKRIGLFSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQ VAQQAVQRGARLIAITDSRMSPLAREAEVTLMVQDSATFGFRALTATMGLAQSLFVALAYRLELSYLPTADGAHGTKAG
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34862; Mature: 34862
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPGEPRAAFVNLARTSGPSTSRYPMSSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARH CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH VETHRDQLGLEGIQSLAEACGVQPSAVVRFAKHFGFSGFSEMQRLFREGIAQQIAPGRAY HHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEE NLRLRDVIEAGSSSLQPEQIADEFIKGSIAGMQQLRQTLDSQALAQAVDLLAETQAIWIA EHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE GSRRAFPIAVYLDYALQHTDKRIGLFSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQ CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH VAQQAVQRGARLIAITDSRMSPLAREAEVTLMVQDSATFGFRALTATMGLAQSLFVALAY HHHHHHHCCCEEEEEECCCCCCHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH RLELSYLPTADGAHGTKAG HHHHEECCCCCCCCCCCCC >Mature Secondary Structure MYPGEPRAAFVNLARTSGPSTSRYPMSSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARH CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH VETHRDQLGLEGIQSLAEACGVQPSAVVRFAKHFGFSGFSEMQRLFREGIAQQIAPGRAY HHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEE NLRLRDVIEAGSSSLQPEQIADEFIKGSIAGMQQLRQTLDSQALAQAVDLLAETQAIWIA EHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE GSRRAFPIAVYLDYALQHTDKRIGLFSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQ CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH VAQQAVQRGARLIAITDSRMSPLAREAEVTLMVQDSATFGFRALTATMGLAQSLFVALAY HHHHHHHCCCEEEEEECCCCCCHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH RLELSYLPTADGAHGTKAG HHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA