| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yfiI [H]
Identifier: 78066045
GI number: 78066045
Start: 1548952
End: 1550124
Strand: Direct
Name: yfiI [H]
Synonym: Bcep18194_A4574
Alternate gene names: 78066045
Gene position: 1548952-1550124 (Clockwise)
Preceding gene: 78066044
Following gene: 78066046
Centisome position: 41.93
GC content: 66.67
Gene sequence:
>1173_bases ATGATTGACGGACAGATTCTGCTTGGACATTCGATTCGCTGGGGCATGGTCGGCGGCGGGCTCGGCAGCCAGATCGGCTA CAGCCACCGGTCGGCCGCGTTGCGCGACGGCAGCTTCCAGCTGGTCGCCGGCGCGTTCGACATCGACCCCGAACGCGGCC GCCAGTTCGGCGTGAAGCTCGGCGTCGCGGCCGAGCGCTGCTATTCCGACTACGCGACGATGTTCGACGCCGAGGCGCGC CGCCCGGACGGCATCCGCGCGGTGTCGATCGCGACGCCGAACAACACGCACTTCGAGATCTGCCGCGCGGCGCTGAACGC GGGGCTGCACGTGGTGTGCGAGAAGCCGCTGTGCTTCACGACCGAGGAAGCCGAAGCGCTGGAGCGGCTGTCGGTCGAGA AGAATCTGATTGTCGGCGTCGCGTACGGTTATTCCGGACACCAGATGATCGAACAGGCGCGCGAGATGATCGCGCGCGGC GATCTCGGCGAGATCCGCATCGTGCAGATGCAGTTCGCGCACGGGTTCCACAGCGAGGGTGTCGAGGCCGCGAGCGCGGC TGCGCGCTGGCGCGTCGACCCGAAGTTCGCGGGCCCGAGCTATGTGCTCGGCGACATCGGCACGCATCCGCTGTACATCT CCGAAGTGATGGCGCCCGAACTGAAGATCCGCCGCCTGATGTGTTCGCGGCAGAGCTTCGTGAAGAGCCGCGCGCCGCTG GAAGACAACGCGTTCACGATCATGGAATACGACACGGGCGCGGTCGGCTACGTGTGGTCGAGCGCGGTGAACGCGGGCTC GATGCACAGCCAGAAGGTGCGCGTGATCGGCTCGAAGGCGAGCGTCGAGTGGTGGGACGAGCATCCGAACCAGTTGCGCT ACGAAGTGCAGGGGCAGCCCGCGCAGGTGCTCGATCGCGGGATGGGTTATCTGCATCCGCACGCATTGCGCGAGGATCGC ATCGGCGCCGGGCATCCGGAAGGGCTGTTCGAGGCCTGGTCGAATCTCTATGCGCGCTTCGCGCTCGCGATGGATGCGGC CGATCGTGGCGACACCGCGGCGTTGAAGAACATCCGCTATCCGGACGTCCACGCGGGTGTGGAAGGCGTGCGCTGGGTCG AGAACTGCGTGCGCTCCGCCGATGCCGGCGGCGTGTGGATCGACTATCGTTGA
Upstream 100 bases:
>100_bases ACGTCGCCGCGAGCCGCGCGTTTCTCGCGTCGGCCGGCTTCGCATGATGCGGCGCACCCTGCACCCCCTGAACTGAACAC GGACCTGGAACACTACCATC
Downstream 100 bases:
>100_bases ACCGGCGGCACGGGCCGGCTGAGGCGCGCTGCGCGCCCGTCGCGCAAGGCTTCGCACCGACGGCCGGCCTTGGTAGACAC CCTAATCTTTACGACGCCGC
Product: oxidoreductase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MIDGQILLGHSIRWGMVGGGLGSQIGYSHRSAALRDGSFQLVAGAFDIDPERGRQFGVKLGVAAERCYSDYATMFDAEAR RPDGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFTTEEAEALERLSVEKNLIVGVAYGYSGHQMIEQAREMIARG DLGEIRIVQMQFAHGFHSEGVEAASAAARWRVDPKFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL EDNAFTIMEYDTGAVGYVWSSAVNAGSMHSQKVRVIGSKASVEWWDEHPNQLRYEVQGQPAQVLDRGMGYLHPHALREDR IGAGHPEGLFEAWSNLYARFALAMDAADRGDTAALKNIRYPDVHAGVEGVRWVENCVRSADAGGVWIDYR
Sequences:
>Translated_390_residues MIDGQILLGHSIRWGMVGGGLGSQIGYSHRSAALRDGSFQLVAGAFDIDPERGRQFGVKLGVAAERCYSDYATMFDAEAR RPDGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFTTEEAEALERLSVEKNLIVGVAYGYSGHQMIEQAREMIARG DLGEIRIVQMQFAHGFHSEGVEAASAAARWRVDPKFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL EDNAFTIMEYDTGAVGYVWSSAVNAGSMHSQKVRVIGSKASVEWWDEHPNQLRYEVQGQPAQVLDRGMGYLHPHALREDR IGAGHPEGLFEAWSNLYARFALAMDAADRGDTAALKNIRYPDVHAGVEGVRWVENCVRSADAGGVWIDYR >Mature_390_residues MIDGQILLGHSIRWGMVGGGLGSQIGYSHRSAALRDGSFQLVAGAFDIDPERGRQFGVKLGVAAERCYSDYATMFDAEAR RPDGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFTTEEAEALERLSVEKNLIVGVAYGYSGHQMIEQAREMIARG DLGEIRIVQMQFAHGFHSEGVEAASAAARWRVDPKFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL EDNAFTIMEYDTGAVGYVWSSAVNAGSMHSQKVRVIGSKASVEWWDEHPNQLRYEVQGQPAQVLDRGMGYLHPHALREDR IGAGHPEGLFEAWSNLYARFALAMDAADRGDTAALKNIRYPDVHAGVEGVRWVENCVRSADAGGVWIDYR
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 42927; Mature: 42927
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGQILLGHSIRWGMVGGGLGSQIGYSHRSAALRDGSFQLVAGAFDIDPERGRQFGVKL CCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCHHHCCEECEEE GVAAERCYSDYATMFDAEARRPDGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFT CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCEEC TEEAEALERLSVEKNLIVGVAYGYSGHQMIEQAREMIARGDLGEIRIVQMQFAHGFHSEG CHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC VEAASAAARWRVDPKFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL CHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHCCCC EDNAFTIMEYDTGAVGYVWSSAVNAGSMHSQKVRVIGSKASVEWWDEHPNQLRYEVQGQP CCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHCCCCEEEEEECCCC AQVLDRGMGYLHPHALREDRIGAGHPEGLFEAWSNLYARFALAMDAADRGDTAALKNIRY HHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC PDVHAGVEGVRWVENCVRSADAGGVWIDYR CCHHCCHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MIDGQILLGHSIRWGMVGGGLGSQIGYSHRSAALRDGSFQLVAGAFDIDPERGRQFGVKL CCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCHHHCCEECEEE GVAAERCYSDYATMFDAEARRPDGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFT CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCEEC TEEAEALERLSVEKNLIVGVAYGYSGHQMIEQAREMIARGDLGEIRIVQMQFAHGFHSEG CHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC VEAASAAARWRVDPKFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL CHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHCCCC EDNAFTIMEYDTGAVGYVWSSAVNAGSMHSQKVRVIGSKASVEWWDEHPNQLRYEVQGQP CCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHCCCCEEEEEECCCC AQVLDRGMGYLHPHALREDRIGAGHPEGLFEAWSNLYARFALAMDAADRGDTAALKNIRY HHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC PDVHAGVEGVRWVENCVRSADAGGVWIDYR CCHHCCHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8973323; 9384377 [H]