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The map label for this gene is nudC [H]

Identifier: 78066027

GI number: 78066027

Start: 1529907

End: 1530443

Strand: Direct

Name: nudC [H]

Synonym: Bcep18194_A4556

Alternate gene names: 78066027

Gene position: 1529907-1530443 (Clockwise)

Preceding gene: 78066026

Following gene: 78066028

Centisome position: 41.41

GC content: 68.34

Gene sequence:

>537_bases
ATGACCACCGCCGATTACCGCTTTTGCCCGCGCTGCGCGAGCCCGCTCACCGAGCGCGCCGATCCCGACCATGAAGGCGG
CCGCATTCGCCAGGCGTGCCCCGACGACAGCTGCGGCTATGTCCACTGGAACAACCCGCTGCCCGTCGTCGCCGCGATCG
TCGAGCTCGACGGCAAGATCCTGCTCGCGCGCAACGCGGCCTGGCCCGAAGGCATGTTCGCGCTGATCACCGGCTTCCTC
GAGAACGGCGAGACGCCCGAGGACGGCATCGCGCGCGAGGTGTTCGAGGAAACGGCGCTGAAGGCCGAGCAGGTGTCGCT
CGTCGGCGTCTACGAATTCATCCGCAAGAACGAGCTGATCATCGCGTACCACGTGCGTGCATCGGGCACGGTCGCGCTCT
CGCCGGAACTGCTCGAATACAAGCTCGTCGATCCGCCGCTGCTGCGCCCGTGGCGCGCCGGCACGGGCATCGCGCTCGCC
GACTGGATGCGTGCGCGCGGCCTCGATTTCGAATTCGTCGACCGGCCGGGGCAGTGA

Upstream 100 bases:

>100_bases
TGCGGCACGGGCAAACTCGCTAGAATGAAGCCTTTCCCGCGCCGAGCGGGTGCGCGGGCAGCCGGCTGGCGGCCGTCCGG
CGCCTGCCAGATCTCCATCG

Downstream 100 bases:

>100_bases
CGGACCGGCCCGTCAGCAGGGCTGCATCCGCCGTGCCGCGAGCGATCGCGGCGCGGCGTTCCGCTTCTTGCCGGTGCGCC
GTGTCCCGCGGCCGCCGCGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTTADYRFCPRCASPLTERADPDHEGGRIRQACPDDSCGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFL
ENGETPEDGIAREVFEETALKAEQVSLVGVYEFIRKNELIIAYHVRASGTVALSPELLEYKLVDPPLLRPWRAGTGIALA
DWMRARGLDFEFVDRPGQ

Sequences:

>Translated_178_residues
MTTADYRFCPRCASPLTERADPDHEGGRIRQACPDDSCGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFL
ENGETPEDGIAREVFEETALKAEQVSLVGVYEFIRKNELIIAYHVRASGTVALSPELLEYKLVDPPLLRPWRAGTGIALA
DWMRARGLDFEFVDRPGQ
>Mature_177_residues
TTADYRFCPRCASPLTERADPDHEGGRIRQACPDDSCGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFLE
NGETPEDGIAREVFEETALKAEQVSLVGVYEFIRKNELIIAYHVRASGTVALSPELLEYKLVDPPLLRPWRAGTGIALAD
WMRARGLDFEFVDRPGQ

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=133, Percent_Identity=35.3383458646617, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 19785; Mature: 19654

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTADYRFCPRCASPLTERADPDHEGGRIRQACPDDSCGYVHWNNPLPVVAAIVELDGKI
CCCCCCCCCCHHCCHHHHCCCCCCCCCEECCCCCCCCCCEEEECCCHHHHHHHHHCCCEE
LLARNAAWPEGMFALITGFLENGETPEDGIAREVFEETALKAEQVSLVGVYEFIRKNELI
EEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IAYHVRASGTVALSPELLEYKLVDPPLLRPWRAGTGIALADWMRARGLDFEFVDRPGQ
EEEEECCCCEEEECHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure 
TTADYRFCPRCASPLTERADPDHEGGRIRQACPDDSCGYVHWNNPLPVVAAIVELDGKI
CCCCCCCCCHHCCHHHHCCCCCCCCCEECCCCCCCCCCEEEECCCHHHHHHHHHCCCEE
LLARNAAWPEGMFALITGFLENGETPEDGIAREVFEETALKAEQVSLVGVYEFIRKNELI
EEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IAYHVRASGTVALSPELLEYKLVDPPLLRPWRAGTGIALADWMRARGLDFEFVDRPGQ
EEEEECCCCEEEECHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA