Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is yjiJ [H]

Identifier: 78066026

GI number: 78066026

Start: 1528532

End: 1529785

Strand: Direct

Name: yjiJ [H]

Synonym: Bcep18194_A4555

Alternate gene names: 78066026

Gene position: 1528532-1529785 (Clockwise)

Preceding gene: 78066024

Following gene: 78066027

Centisome position: 41.38

GC content: 74.4

Gene sequence:

>1254_bases
ATGTCCCGCTCGAACGCCCCGATCGCCCCGACTGCCGCCGCCGGCGCGTCTCCCGTCGATGATGCCGACCGCCGCGCCCG
CACGGCCGCACTGGCCTGCATGGTCGGCCTCGCGGTCGTGCTCGGTGTCGGCCGCTTTGCGTTCACGCCCTTGTTGCCGC
TGATGCTCGCGGACGGTTCGATCGGCCTGAAGGCCGGCGGCTGGCTCGCGTCGGCGAACTACGCGGGCTACTTCGTCGGC
GCGGTCAGTTGCGCCGCGCTGCGGGTGGCGCCCGCGCGCATGGTGCGCATCGGGCTCGTGGCCACCGTGCTGCTCACCGC
CGCGATGGGTGTCGGCCATCTGCTGCCCGTGTGGCTCGCGGTGCGCTTCGTGGCCGGCGTCGTCAGCGCGTGGACGTTCG
TGTTCGTGTCGCAATGGGGGCTGCGGCGCCTGGCCGAACTGCATGCGCCGGAGTGGAGCGGGGTGATCTACGCGGGGCCC
GGCGTCGGCATCGTGGTGACGGGGCTGATCGGCAGCGCGCTGGCCGGCCAGCGCGCTGCGTCGGGCTGGCTGGGGTTCGC
GGCGCTGTCGGCCGTGCTGTCTGTCGTGATCTGGCGCACGTTTGCAGTTGCCCCGGCGCAAGCCGTGCCGGCGGGCGGTG
CCGCGTCGCACGCGGCCGCCGCAACCGCGACGATGCCGGCCGAGACGCGCCGCCATCACGCGGACGCCGCGTGGCTCGTC
GTGCTGTACGGCATGCCGGGCTTCGGCTACATCATCACCGCGACGTTCCTGCCGGTGATCGCGCGCGCCGCGCTGCCGGC
CGGTTCGCCGTGGCCCGACCTGTTCTGGCCGATGTTCGGCGCGGCGCTGATCGTCGGCGCGATTACCGCCGCGCGACTGC
CCGGCCACTGGGACAACCGGCTGCTGCTGGCCGCCGGCTGCGCGACGCAGGCGCTCGGCATCGCCGCCGGGATCGTGTGG
CCGAACGCGGCCGGCTTCTCGATCGGCAGCGCGCTGCTCGGCCTGCCGTTCACCGCGATCACGCTGTTCGCGATGCGCGA
GGCGCGGCGTTTGCACGGCGAGCGGGCCGCCGGGCTGATGGGCTATGCGACCGCGTCGTACGGGGTCGGGCAGATTCTCG
GCCCGCTCGTCGCGGCGCCGCTGGCCGCGCGCTTCGGGTCGTTTTCCCCCGCGCTGTGGGTTGCGGTAGCCGCGCTGCTG
CTGGGCGCCGCCGGCTTCGCGGCGACCGCCGCACGAAGGCGCCTGCAACCCTGA

Upstream 100 bases:

>100_bases
ATTCTTAATTATTCATTTCTCAAGAACGTTTGGTCAAGCTAGGATGGAAGCATTCCGGTTTCCGATCCGGCCGGCGCGTT
AAACGCCTGCCCATGCCGCC

Downstream 100 bases:

>100_bases
TTTCGGCGGGGCCGGATCGTCTGCGGCACGGGCAAACTCGCTAGAATGAAGCCTTTCCCGCGCCGAGCGGGTGCGCGGGC
AGCCGGCTGGCGGCCGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSRSNAPIAPTAAAGASPVDDADRRARTAALACMVGLAVVLGVGRFAFTPLLPLMLADGSIGLKAGGWLASANYAGYFVG
AVSCAALRVAPARMVRIGLVATVLLTAAMGVGHLLPVWLAVRFVAGVVSAWTFVFVSQWGLRRLAELHAPEWSGVIYAGP
GVGIVVTGLIGSALAGQRAASGWLGFAALSAVLSVVIWRTFAVAPAQAVPAGGAASHAAAATATMPAETRRHHADAAWLV
VLYGMPGFGYIITATFLPVIARAALPAGSPWPDLFWPMFGAALIVGAITAARLPGHWDNRLLLAAGCATQALGIAAGIVW
PNAAGFSIGSALLGLPFTAITLFAMREARRLHGERAAGLMGYATASYGVGQILGPLVAAPLAARFGSFSPALWVAVAALL
LGAAGFAATAARRRLQP

Sequences:

>Translated_417_residues
MSRSNAPIAPTAAAGASPVDDADRRARTAALACMVGLAVVLGVGRFAFTPLLPLMLADGSIGLKAGGWLASANYAGYFVG
AVSCAALRVAPARMVRIGLVATVLLTAAMGVGHLLPVWLAVRFVAGVVSAWTFVFVSQWGLRRLAELHAPEWSGVIYAGP
GVGIVVTGLIGSALAGQRAASGWLGFAALSAVLSVVIWRTFAVAPAQAVPAGGAASHAAAATATMPAETRRHHADAAWLV
VLYGMPGFGYIITATFLPVIARAALPAGSPWPDLFWPMFGAALIVGAITAARLPGHWDNRLLLAAGCATQALGIAAGIVW
PNAAGFSIGSALLGLPFTAITLFAMREARRLHGERAAGLMGYATASYGVGQILGPLVAAPLAARFGSFSPALWVAVAALL
LGAAGFAATAARRRLQP
>Mature_416_residues
SRSNAPIAPTAAAGASPVDDADRRARTAALACMVGLAVVLGVGRFAFTPLLPLMLADGSIGLKAGGWLASANYAGYFVGA
VSCAALRVAPARMVRIGLVATVLLTAAMGVGHLLPVWLAVRFVAGVVSAWTFVFVSQWGLRRLAELHAPEWSGVIYAGPG
VGIVVTGLIGSALAGQRAASGWLGFAALSAVLSVVIWRTFAVAPAQAVPAGGAASHAAAATATMPAETRRHHADAAWLVV
LYGMPGFGYIITATFLPVIARAALPAGSPWPDLFWPMFGAALIVGAITAARLPGHWDNRLLLAAGCATQALGIAAGIVWP
NAAGFSIGSALLGLPFTAITLFAMREARRLHGERAAGLMGYATASYGVGQILGPLVAAPLAARFGSFSPALWVAVAALLL
GAAGFAATAARRRLQP

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790788, Length=377, Percent_Identity=29.973474801061, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010645
- InterPro:   IPR016196 [H]

Pfam domain/function: PF06779 DUF1228 [H]

EC number: NA

Molecular weight: Translated: 42395; Mature: 42264

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSNAPIAPTAAAGASPVDDADRRARTAALACMVGLAVVLGVGRFAFTPLLPLMLADGS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IGLKAGGWLASANYAGYFVGAVSCAALRVAPARMVRIGLVATVLLTAAMGVGHLLPVWLA
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRFVAGVVSAWTFVFVSQWGLRRLAELHAPEWSGVIYAGPGVGIVVTGLIGSALAGQRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHH
SGWLGFAALSAVLSVVIWRTFAVAPAQAVPAGGAASHAAAATATMPAETRRHHADAAWLV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCEEEE
VLYGMPGFGYIITATFLPVIARAALPAGSPWPDLFWPMFGAALIVGAITAARLPGHWDNR
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LLLAAGCATQALGIAAGIVWPNAAGFSIGSALLGLPFTAITLFAMREARRLHGERAAGLM
EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHH
GYATASYGVGQILGPLVAAPLAARFGSFSPALWVAVAALLLGAAGFAATAARRRLQP
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRSNAPIAPTAAAGASPVDDADRRARTAALACMVGLAVVLGVGRFAFTPLLPLMLADGS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IGLKAGGWLASANYAGYFVGAVSCAALRVAPARMVRIGLVATVLLTAAMGVGHLLPVWLA
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRFVAGVVSAWTFVFVSQWGLRRLAELHAPEWSGVIYAGPGVGIVVTGLIGSALAGQRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHH
SGWLGFAALSAVLSVVIWRTFAVAPAQAVPAGGAASHAAAATATMPAETRRHHADAAWLV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCEEEE
VLYGMPGFGYIITATFLPVIARAALPAGSPWPDLFWPMFGAALIVGAITAARLPGHWDNR
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LLLAAGCATQALGIAAGIVWPNAAGFSIGSALLGLPFTAITLFAMREARRLHGERAAGLM
EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHH
GYATASYGVGQILGPLVAAPLAARFGSFSPALWVAVAALLLGAAGFAATAARRRLQP
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]