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The map label for this gene is ynbC [H]

Identifier: 78065991

GI number: 78065991

Start: 1484410

End: 1486179

Strand: Direct

Name: ynbC [H]

Synonym: Bcep18194_A4520

Alternate gene names: 78065991

Gene position: 1484410-1486179 (Clockwise)

Preceding gene: 78065990

Following gene: 78065992

Centisome position: 40.18

GC content: 71.47

Gene sequence:

>1770_bases
ATGAGCGCACGCATGGCCCGCGAGGCCGACTTCATCACGCACGACGGCGAAACGCTGTTCTATCGTCACTGGCCCGCCAC
GGGCGCGCGCTGCCGCGGCGCAATCGTGTTGCTGCATCGCGGCCACGAACACTCGGCGCGCGTCGCGCACCTCGTCGACG
AGCTCGACCTGCCCGATTTCGCATTCTTCGCGTGGGATGCGCGCGGCCACGGCCGCTCGCCCGGCGCGCGCGGCTACAGC
CCGAGCGCGGCCGCGTCGGTGCGCGACCTGCAGACCTTCGTTGAACATATCCGCGACACGCACGGCATCGCGATCGAGGA
CATGGCCGTGGTCGGCCAGAGCGTCGGCGCGGTGCTCGCGGCCACCTGGGCGCACGATTATGCGCCGCCGATCCGCGCGC
TCGTCGTCGCGTCGCCGGCGTTCCACATCAAGCTCTACGTACCGTTCGCGCGGCCGGGCCTGCGGCTGATGCACAAGCTG
CGCGGGCTGTTCTACGTGAACAGCTACGTGAAGCCGAAATTCCTCACGCACGATCCCGAGCGGATCGCGAGCTATGCGTC
CGACCCGCTGATCACGCGGCCGATCGCGGTCAACATGCTGCTCGACCTGCACGATACCGCGCAGCGGATCGTCGCCGACG
CGGCCGCGATCACCGTGCCGACGCAGCTGCTGATCTCGGGCGCCGACTGGGTCGTGCATCGCGGCCCGCAGGACCGCTTC
TTCGAGCGCCTCGGCGCCGCGCGCAAGGAGCGCATCGTGCTGCCGGGCTTCTATCACGACACGCTCGGCGAACGCGACCG
CGCGCAGGCGCTCGCACCGCTGCGTGCATTCGTGCTGCGGGAATTCGATGCGCCGAGCCCGCGCGTGTCGCTCGCCGACG
CCGACCGGCGCGGCGCGTTCCACGACGAATACGCGGCGCTCGGCCGCCCGCCCGCGAATGCGTTCGCGCGGGCGTACTGG
GCGCTCACGCGCGCCGGCCTGAAGGCCGGCGGCGCGCTGTCGGACGGCATCGCGCTCGGGCTGCGGCTCGGCTTCGATTC
GGGCTCGACGCTCGACTACGTGTACCGCAACCGCGCGCAGGGGCGTCTCGGCGTCGGCGCGCTGATCGATCGCACCTATC
TCGATTCGCCAGGCTGGGTCGGCATCCGCCAGCGCAAGGTGCATCTGCAGGAACTGATCGGCGCGGCGATCGGCCGCCTG
CGCGGCCACGGCGCGCCGGTGCGGATCGTCGACATCGCGGCCGGGCACGGGCGCTACGTGCTCGACGCGATCGCGTCGGC
CGCCGAGCGCGACGGCGCGGCGCCCGACGACATCACGCTGCGCGACTACAGCCCGCCGAACGTCGAGGCCGGGCGCGTGC
TGATTGCGCAGCGCGGCCTCGATCCGATTGCGCGCTTCGAGCGCGGCGACGCGTTCGACGAGGCGTCGCTCGCGACGCTC
GAGCCGCGTCCGACGCTCGCGATCGTGTCGGGCCTCTACGAGCTGTTCGGCGAGAACGCGCTGATCGAGCGCTCGCTGCG
CGGGCTCGCGCAGGCCGTGCCGCCGGGCGGCTATCTCGTCTATACGGGGCAGCCGTGGCATCCGCAGCTCGAATTCATCG
CGCGCGCGCTGAACAATCACCGCGGCGAAGCGACCTGGGTGATGCGCCGGCGCTCGCAGGCCGAGATGGACGAACTCGTC
GCGCGCGCGGGCTTCCGCAAGCTCGACCAGCGGATCGACGAAATGGGCATCTTCACGGTCAGCCTCGCGCAGCGGGTCGA
CGCGTCATGA

Upstream 100 bases:

>100_bases
TCGCGGAAAAGGGCGGTTAAAGGGTAGTCAGAGCAGTTGCAGTACCGGGCGCCGGAGGGCGGCGCACCAAGATTCGAATA
ACGAAACGAGAGAGAAACGC

Downstream 100 bases:

>100_bases
GCGCGCTCGACGGCGGCGCGAGCGGCCTCGCCGAGCCGGCCTCGGCGGCCGGCGCGCGCGACGCGTCGTTCGCGCTGCGC
TTCGGCTGGCTCGCGGTGAT

Product: Alpha/beta hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MSARMAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGHGRSPGARGYS
PSAAASVRDLQTFVEHIRDTHGIAIEDMAVVGQSVGAVLAATWAHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKL
RGLFYVNSYVKPKFLTHDPERIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTQLLISGADWVVHRGPQDRF
FERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAFHDEYAALGRPPANAFARAYW
ALTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGVGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRL
RGHGAPVRIVDIAAGHGRYVLDAIASAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLDPIARFERGDAFDEASLATL
EPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGEATWVMRRRSQAEMDELV
ARAGFRKLDQRIDEMGIFTVSLAQRVDAS

Sequences:

>Translated_589_residues
MSARMAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGHGRSPGARGYS
PSAAASVRDLQTFVEHIRDTHGIAIEDMAVVGQSVGAVLAATWAHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKL
RGLFYVNSYVKPKFLTHDPERIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTQLLISGADWVVHRGPQDRF
FERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAFHDEYAALGRPPANAFARAYW
ALTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGVGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRL
RGHGAPVRIVDIAAGHGRYVLDAIASAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLDPIARFERGDAFDEASLATL
EPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGEATWVMRRRSQAEMDELV
ARAGFRKLDQRIDEMGIFTVSLAQRVDAS
>Mature_588_residues
SARMAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGHGRSPGARGYSP
SAAASVRDLQTFVEHIRDTHGIAIEDMAVVGQSVGAVLAATWAHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKLR
GLFYVNSYVKPKFLTHDPERIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTQLLISGADWVVHRGPQDRFF
ERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAFHDEYAALGRPPANAFARAYWA
LTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGVGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRLR
GHGAPVRIVDIAAGHGRYVLDAIASAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLDPIARFERGDAFDEASLATLE
PRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGEATWVMRRRSQAEMDELVA
RAGFRKLDQRIDEMGIFTVSLAQRVDAS

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787678, Length=588, Percent_Identity=57.1428571428571, Blast_Score=647, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 64688; Mature: 64557

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARMAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDF
CCCCHHHCCCCEECCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCE
AFFAWDARGHGRSPGARGYSPSAAASVRDLQTFVEHIRDTHGIAIEDMAVVGQSVGAVLA
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ATWAHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKLRGLFYVNSYVKPKFLTHDPE
HHHHHCCCCHHHEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHEECCCCCCCCCCCCHH
RIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTQLLISGADWVVHRGPQDRF
HHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCHHHH
FERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAF
HHHHCCHHHCCEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
HDEYAALGRPPANAFARAYWALTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQ
CHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCC
GRLGVGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRLRGHGAPVRIVDIAAGHGRYV
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHH
LDAIASAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLDPIARFERGDAFDEASLATL
HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEEE
EPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNH
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC
RGEATWVMRRRSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
SARMAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDF
CCCHHHCCCCEECCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCE
AFFAWDARGHGRSPGARGYSPSAAASVRDLQTFVEHIRDTHGIAIEDMAVVGQSVGAVLA
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ATWAHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKLRGLFYVNSYVKPKFLTHDPE
HHHHHCCCCHHHEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHEECCCCCCCCCCCCHH
RIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTQLLISGADWVVHRGPQDRF
HHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCHHHH
FERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAF
HHHHCCHHHCCEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
HDEYAALGRPPANAFARAYWALTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQ
CHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCC
GRLGVGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRLRGHGAPVRIVDIAAGHGRYV
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHH
LDAIASAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLDPIARFERGDAFDEASLATL
HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEEE
EPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNH
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC
RGEATWVMRRRSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]