| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fecR [H]
Identifier: 78065974
GI number: 78065974
Start: 1467394
End: 1468380
Strand: Direct
Name: fecR [H]
Synonym: Bcep18194_A4503
Alternate gene names: 78065974
Gene position: 1467394-1468380 (Clockwise)
Preceding gene: 78065973
Following gene: 78065975
Centisome position: 39.72
GC content: 75.28
Gene sequence:
>987_bases ATGGCCGCCCCGGGAGCACCGGCGGTGCCGCCGCAGGTGGCGCGGCGCGCGGTGGAATGGTGGGTCGACCGGCAGGCCGG CCGCACCGATGAAGCGTCCGACGCCGCGCTTGCGCGCTGGCGTGCCGAGGATCCGGCGCACGACGCGGCATGGCGCCATA TCGAGACGATGCAGCGCAGGTTCGGCGGGCTGGCGGCCGGGCTTGACCCGCAGGTCGCGCATGCGGCGCTGCTGCCGCCG CGGGCGGGCCGCCGCCGCGCGGCCGTGAAGGCGCTGGCCGTGCTGCTGTTCGCGGGCGGGGCCGCATGGATGGCCGAACC CGCGCGGCGCGCGGCGATCTGGCCGGCCGACCTGCGCACGGCGGTCGGCGAGCGGCGCACGGTGACGCTCGCGGATCGCA CGGTCGTCGTCCTCGATACCGACACCGCGCTCGACGTGCGCTTCGACGCTACGGCACGCCGCCTGCGCCTGCTGCGCGGC ACGATCATGGTGACGAGCGGCCACGACGATCGCGTGCCGGCGCGGCCGCTCGTCGTCGCGACCGCACAGGGTGAGCTGCG GCCGCTCGGCACGCGCTTCGCGGTACGGCAGCGCGACGGCGCGACGCGTGTCGAGGTGTTCGCCGGTGCCGTGCGTGTGC AGCCCGACGATGCGACGGCCGACGCACGCGTGATCGCGGCCGGAGAGGGCGCGGATTTCACGCGCGACACGATCGACGCG CCGGCACCGCTCGATGCGTATGCGTCCGCGTGGACGAGCGGCATGCTCGTCGCGTCGCGCATGCGGCTGGCCGACCTCGT CGCCGAGCTCGACCGCTATCGCCGCGGCAGCCTGCGCTGCGCTGCGGCCGTGGCCGACCTGCGCGTGTCGGGCACCTATC CGCTCGACGATCCCGCGCGCGTGCTCGACACGCTGAAGGCGACGCTGCCGATCGACGTTCACTACCTGACGCGCTACTGG GCGACGGTCGTACCGGCCCGTTCGTGA
Upstream 100 bases:
>100_bases GGCCGAGATCGCGCGCGAACTCGGCGTGTCGCTGGCGACGGTGAAGCGCTATCTCGTGAAGGCCGGCACGCAGTGCTTCT TCGCGATGGCGGCCTGACCG
Downstream 100 bases:
>100_bases GCGTTTCAAAAAAATTTCTCAACGACCTGAGCTGTTTCTCGATGTTCGCGTGACATGGGTAGTGAAAGCAGCACTGGCCC ATCGTCCACCGACCTCCCGA
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAAPGAPAVPPQVARRAVEWWVDRQAGRTDEASDAALARWRAEDPAHDAAWRHIETMQRRFGGLAAGLDPQVAHAALLPP RAGRRRAAVKALAVLLFAGGAAWMAEPARRAAIWPADLRTAVGERRTVTLADRTVVVLDTDTALDVRFDATARRLRLLRG TIMVTSGHDDRVPARPLVVATAQGELRPLGTRFAVRQRDGATRVEVFAGAVRVQPDDATADARVIAAGEGADFTRDTIDA PAPLDAYASAWTSGMLVASRMRLADLVAELDRYRRGSLRCAAAVADLRVSGTYPLDDPARVLDTLKATLPIDVHYLTRYW ATVVPARS
Sequences:
>Translated_328_residues MAAPGAPAVPPQVARRAVEWWVDRQAGRTDEASDAALARWRAEDPAHDAAWRHIETMQRRFGGLAAGLDPQVAHAALLPP RAGRRRAAVKALAVLLFAGGAAWMAEPARRAAIWPADLRTAVGERRTVTLADRTVVVLDTDTALDVRFDATARRLRLLRG TIMVTSGHDDRVPARPLVVATAQGELRPLGTRFAVRQRDGATRVEVFAGAVRVQPDDATADARVIAAGEGADFTRDTIDA PAPLDAYASAWTSGMLVASRMRLADLVAELDRYRRGSLRCAAAVADLRVSGTYPLDDPARVLDTLKATLPIDVHYLTRYW ATVVPARS >Mature_327_residues AAPGAPAVPPQVARRAVEWWVDRQAGRTDEASDAALARWRAEDPAHDAAWRHIETMQRRFGGLAAGLDPQVAHAALLPPR AGRRRAAVKALAVLLFAGGAAWMAEPARRAAIWPADLRTAVGERRTVTLADRTVVVLDTDTALDVRFDATARRLRLLRGT IMVTSGHDDRVPARPLVVATAQGELRPLGTRFAVRQRDGATRVEVFAGAVRVQPDDATADARVIAAGEGADFTRDTIDAP APLDAYASAWTSGMLVASRMRLADLVAELDRYRRGSLRCAAAVADLRVSGTYPLDDPARVLDTLKATLPIDVHYLTRYWA TVVPARS
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=314, Percent_Identity=35.9872611464968, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35452; Mature: 35321
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPGAPAVPPQVARRAVEWWVDRQAGRTDEASDAALARWRAEDPAHDAAWRHIETMQRR CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH FGGLAAGLDPQVAHAALLPPRAGRRRAAVKALAVLLFAGGAAWMAEPARRAAIWPADLRT HCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHCCCCCHHHHH AVGERRTVTLADRTVVVLDTDTALDVRFDATARRLRLLRGTIMVTSGHDDRVPARPLVVA HHCCCEEEEEECCEEEEEECCCEEEEEECHHHHHHHHHHCEEEEECCCCCCCCCCCEEEE TAQGELRPLGTRFAVRQRDGATRVEVFAGAVRVQPDDATADARVIAAGEGADFTRDTIDA ECCCCCCCCCHHEEEECCCCCCEEEEEECEEEECCCCCCCCCEEEEECCCCCCCHHCCCC PAPLDAYASAWTSGMLVASRMRLADLVAELDRYRRGSLRCAAAVADLRVSGTYPLDDPAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCCHHH VLDTLKATLPIDVHYLTRYWATVVPARS HHHHHHHHCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure AAPGAPAVPPQVARRAVEWWVDRQAGRTDEASDAALARWRAEDPAHDAAWRHIETMQRR CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH FGGLAAGLDPQVAHAALLPPRAGRRRAAVKALAVLLFAGGAAWMAEPARRAAIWPADLRT HCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHCCCCCHHHHH AVGERRTVTLADRTVVVLDTDTALDVRFDATARRLRLLRGTIMVTSGHDDRVPARPLVVA HHCCCEEEEEECCEEEEEECCCEEEEEECHHHHHHHHHHCEEEEECCCCCCCCCCCEEEE TAQGELRPLGTRFAVRQRDGATRVEVFAGAVRVQPDDATADARVIAAGEGADFTRDTIDA ECCCCCCCCCHHEEEECCCCCCEEEEEECEEEECCCCCCCCCEEEEECCCCCCCHHCCCC PAPLDAYASAWTSGMLVASRMRLADLVAELDRYRRGSLRCAAAVADLRVSGTYPLDDPAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCCHHH VLDTLKATLPIDVHYLTRYWATVVPARS HHHHHHHHCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]