| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78065966
Identifier: 78065966
GI number: 78065966
Start: 1461607
End: 1462353
Strand: Direct
Name: 78065966
Synonym: Bcep18194_A4495
Alternate gene names: NA
Gene position: 1461607-1462353 (Clockwise)
Preceding gene: 78065963
Following gene: 78065967
Centisome position: 39.57
GC content: 68.01
Gene sequence:
>747_bases ATGCCGCTCGCCGGCCTGACCCTTGCCGCCGCCGCCCACGCGGAAAACCAGTATTCGCTGTCGCTGGGTGGCGGTATCGC GCCGCGCTACCCGGGCAGCAACCAGTCTCGCGGTGTCGTTGCGCCGGGGTTTTCGGCGAAGTTCGGCAATGGCTTCTTCA TCGACAGCACCCAGGGCGCCGGTTACCGGCTGGACCTGCCGCACGGGGCGTTCGTGTCGGCGGCCGTGAGCTATGACGCG GGTCGAGCCGACGAGAACCGCCTCGACTTGCCGGGCTCCGACTACCTGAAGGGCATGGGCCGGATTCCGGGCTCGGTGCT GGTCGGCGTGCGCGCGGGCGTGACGCTGTTCAATGCGGCGGAACTGAGTGTCACGATCGACACACCCGTGACGCACACGT CGCACGGCGTGTCGGGGCACATGGATCTCGCGGTGCCGGTGTTCAAGACCGCGCAGCACGAGATCATCGTGACGGGTACC GTGCACGCGGGCTCGGGGCGCTATACGCAGACGTTCTACGGCGTGACCGATGCGCAGTCGATGACGAGCCGGTTCCGGCC GTATTCGACGAGCGGCGGGATCGACAGCGCGTCGATGGCGGTCGCGTGGAACTGGACGCTGTCGCAGCACTGGTCGGTGC TTGCGACCGGCGGCGTGACGCGGCTGCTCGGCCGCTACGGCGACAGCCCGATCGTCCAGTCGCGCAGCAACTACTACGCG ATCGCGGGTGCGACCTACAAGTTCTGA
Upstream 100 bases:
>100_bases TATTCAGGACAGTCTCGGCGCAGGGCGGCCCCTAGACTGCGGGCTCCGTCACTCCTATCTCAATATTGTGCGCCCAATAC TCCGCCGCTACCGCTATTGC
Downstream 100 bases:
>100_bases GCGGATTGTCGCGGCACGCATCGAGCGGCGCAGCCGGCATGCCCGTGCCGTCACGCCGCGCGGCGTGCGGTAACATGCAG GCGGCTTCGGCGGCAAGCCG
Product: MltA-interacting MipA
Products: NA
Alternate protein names: Outer Membrane Protein; MltA-Interacting MipA; MipA Family Protein; Outer Membrane Protein V; MltA Scaffolding Protein; MltA-Interacting Protein MipA Family Protein; MltA-Interacting Protein MipA; Outer Membrane Scaffolding Protein; Conserved Protein; MipA Family MltA-Interacting Protein; Outer Membrane Protein Yiat
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPLAGLTLAAAAHAENQYSLSLGGGIAPRYPGSNQSRGVVAPGFSAKFGNGFFIDSTQGAGYRLDLPHGAFVSAAVSYDA GRADENRLDLPGSDYLKGMGRIPGSVLVGVRAGVTLFNAAELSVTIDTPVTHTSHGVSGHMDLAVPVFKTAQHEIIVTGT VHAGSGRYTQTFYGVTDAQSMTSRFRPYSTSGGIDSASMAVAWNWTLSQHWSVLATGGVTRLLGRYGDSPIVQSRSNYYA IAGATYKF
Sequences:
>Translated_248_residues MPLAGLTLAAAAHAENQYSLSLGGGIAPRYPGSNQSRGVVAPGFSAKFGNGFFIDSTQGAGYRLDLPHGAFVSAAVSYDA GRADENRLDLPGSDYLKGMGRIPGSVLVGVRAGVTLFNAAELSVTIDTPVTHTSHGVSGHMDLAVPVFKTAQHEIIVTGT VHAGSGRYTQTFYGVTDAQSMTSRFRPYSTSGGIDSASMAVAWNWTLSQHWSVLATGGVTRLLGRYGDSPIVQSRSNYYA IAGATYKF >Mature_247_residues PLAGLTLAAAAHAENQYSLSLGGGIAPRYPGSNQSRGVVAPGFSAKFGNGFFIDSTQGAGYRLDLPHGAFVSAAVSYDAG RADENRLDLPGSDYLKGMGRIPGSVLVGVRAGVTLFNAAELSVTIDTPVTHTSHGVSGHMDLAVPVFKTAQHEIIVTGTV HAGSGRYTQTFYGVTDAQSMTSRFRPYSTSGGIDSASMAVAWNWTLSQHWSVLATGGVTRLLGRYGDSPIVQSRSNYYAI AGATYKF
Specific function: Unknown
COG id: COG3713
COG function: function code M; Outer membrane protein V
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26000; Mature: 25869
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLAGLTLAAAAHAENQYSLSLGGGIAPRYPGSNQSRGVVAPGFSAKFGNGFFIDSTQGA CCCCCEEEEEHHCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCC GYRLDLPHGAFVSAAVSYDAGRADENRLDLPGSDYLKGMGRIPGSVLVGVRAGVTLFNAA CEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCEEEEEEE ELSVTIDTPVTHTSHGVSGHMDLAVPVFKTAQHEIIVTGTVHAGSGRYTQTFYGVTDAQS EEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCHHH MTSRFRPYSTSGGIDSASMAVAWNWTLSQHWSVLATGGVTRLLGRYGDSPIVQSRSNYYA HHHHCCCCCCCCCCCCCEEEEEEEEEHHCCCEEEEECCHHHHHHHCCCCCCEECCCCEEE IAGATYKF EEEEEECC >Mature Secondary Structure PLAGLTLAAAAHAENQYSLSLGGGIAPRYPGSNQSRGVVAPGFSAKFGNGFFIDSTQGA CCCCEEEEEHHCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCC GYRLDLPHGAFVSAAVSYDAGRADENRLDLPGSDYLKGMGRIPGSVLVGVRAGVTLFNAA CEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCEEEEEEE ELSVTIDTPVTHTSHGVSGHMDLAVPVFKTAQHEIIVTGTVHAGSGRYTQTFYGVTDAQS EEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCHHH MTSRFRPYSTSGGIDSASMAVAWNWTLSQHWSVLATGGVTRLLGRYGDSPIVQSRSNYYA HHHHCCCCCCCCCCCCCEEEEEEEEEHHCCCEEEEECCHHHHHHHCCCCCCEECCCCEEE IAGATYKF EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA