| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yjjL [C]
Identifier: 78065902
GI number: 78065902
Start: 1388129
End: 1389346
Strand: Direct
Name: yjjL [C]
Synonym: Bcep18194_A4431
Alternate gene names: 78065902
Gene position: 1388129-1389346 (Clockwise)
Preceding gene: 78065901
Following gene: 78065903
Centisome position: 37.58
GC content: 69.46
Gene sequence:
>1218_bases ATGTCGTCGGTGCAGGTGAGAGTGCTCGCGCTGTTTTCGGTCGGGTATTTCGTGTCGTATGTGTTTCGCGGTGTCAATCT GGGCTTCGCGCCGTTCGTCACGCATGAGCTCGGCTTGTCGGCCGCCGATCTCGGCCTGCTGACCAGCCTCTACTTCCTCG GCTTCGCGGGCGCGCAAATCCCGGCCGGCGTGATGCTCGACCACTTCGGCCCCCGCCGCGTGACGGCCGGCATGCTGCTG TTCGCGGCCGCCGGCGCAGCCGTGTTCGGTGCCGCGCACAGCCTCGGCACGATGATGGTGGGCCGGCTGCTGATCGGCGT CGGCGTATCGGTGTGCCTCGGCGCGGCGTTCAAGGCGCTCGCGCAACATTTCCCGGTCGGCCGGCTGCCGCTCGTCAACG GCCTCGTGATGGCCGTGGGCGGCCTCGGCGGCGTGATGGTCGGTTCGCCGCTGACCTGGCTGCTCGGCTGGACGAGCTGG CGTGCGATCTGCTTCGGCCTCGCGGTGCTGACGGTGATCGTCGCGGCGTCGATTGGCCTGGGTGCGCCGGAGGCGAAGCA GGTGCGCCACCAGGGCGGCATCGTCAGCCAGTTCAAGGGCACGTGGCACATCCTGAGCAGCCGCGCGTTCTGGAAGATTT CGTCGTTCTCCGTCGTCACGCAGGGCGTGTTCTACGCGATGCAGTCGCTGTGGGTCGGGCCGTACCTGCGCGATGTCGCG GGGTTCGATGCGCCGCATGCCGCGCGCCTCGTGTCGGTGCTCGGCTTCGCGATGATGGCCGGCTGCGTCGGCTTCGGCGC CGCGGCGCGCGTGCTCGAGCGGCGCGGCGTGTCCGTGTATGCGTTCTGCGGCGTCGGCATGGCGCTGTTCGTCGCGACGC AGGCTGCGATCGTCGCGCGCGTGCCGTTGCCGCCGGCCGTGTTGTGGGCCGCATACGGGATGTTCGGTGGCGTCGGCATC CTGACCTACGCGGTGATGGCCGGGCATTTTCCCGCTCACCTGATCGGCCGCGCGAACACGACGCTCACGCTCGTGATTTT CCTGCTGATCTTTGCGTTCCAGATCGGTGTCGGCGCGGTGCTGTCGCACTGGCCGGCGGTCGACGGCCGCTATCCGGCCG CCGCGCACTTCACCGCATGGGGCGTGCTGCTCGCGCTGCAGCTCGCGAGCGCCGTCTGGTACGTCTGGCCCACGCGCGGC GCTGGTCAAGCGCACTGA
Upstream 100 bases:
>100_bases ACGAAATGCAAGGAAACGCCGTCACCGAGGTGACGGCGTTTTTGTTTGTACGCAGCGCGGGGGCGCTGTTTCGAAGGTCT TCATATAACAAGGGGAAGTG
Downstream 100 bases:
>100_bases TCCGGCGGTACGCTGGCGGGTAGGGCGGCCGCGGAAACGGGGCCGCAGCGCGTTGCGCCGCGTCGCCGGACGCGGCGCGC GCACGAGCGGACGGCCATAT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Transporter MFS Superfamily; Facilitator Family Oxalate/Formate Antiporter; Carbohydrate Transport Membrane Protein; Sugar Transport Family Protein; MFS Family Transporter; Facilitator Family Transporter; Sugar Phosphate Permease; Facilitator Superfamily Permease
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQIPAGVMLDHFGPRRVTAGMLL FAAAGAAVFGAAHSLGTMMVGRLLIGVGVSVCLGAAFKALAQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWTSW RAICFGLAVLTVIVAASIGLGAPEAKQVRHQGGIVSQFKGTWHILSSRAFWKISSFSVVTQGVFYAMQSLWVGPYLRDVA GFDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYAFCGVGMALFVATQAAIVARVPLPPAVLWAAYGMFGGVGI LTYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAVLSHWPAVDGRYPAAAHFTAWGVLLALQLASAVWYVWPTRG AGQAH
Sequences:
>Translated_405_residues MSSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQIPAGVMLDHFGPRRVTAGMLL FAAAGAAVFGAAHSLGTMMVGRLLIGVGVSVCLGAAFKALAQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWTSW RAICFGLAVLTVIVAASIGLGAPEAKQVRHQGGIVSQFKGTWHILSSRAFWKISSFSVVTQGVFYAMQSLWVGPYLRDVA GFDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYAFCGVGMALFVATQAAIVARVPLPPAVLWAAYGMFGGVGI LTYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAVLSHWPAVDGRYPAAAHFTAWGVLLALQLASAVWYVWPTRG AGQAH >Mature_404_residues SSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQIPAGVMLDHFGPRRVTAGMLLF AAAGAAVFGAAHSLGTMMVGRLLIGVGVSVCLGAAFKALAQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWTSWR AICFGLAVLTVIVAASIGLGAPEAKQVRHQGGIVSQFKGTWHILSSRAFWKISSFSVVTQGVFYAMQSLWVGPYLRDVAG FDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYAFCGVGMALFVATQAAIVARVPLPPAVLWAAYGMFGGVGIL TYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAVLSHWPAVDGRYPAAAHFTAWGVLLALQLASAVWYVWPTRGA GQAH
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42340; Mature: 42208
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC PAGVMLDHFGPRRVTAGMLLFAAAGAAVFGAAHSLGTMMVGRLLIGVGVSVCLGAAFKAL CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWTSWRAICFGLAVLTVIVAASIGL HHHCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAPEAKQVRHQGGIVSQFKGTWHILSSRAFWKISSFSVVTQGVFYAMQSLWVGPYLRDVA CCCHHHHHHHHCCCHHHHCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCHHHHHHH GFDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYAFCGVGMALFVATQAAIVAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHEE VPLPPAVLWAAYGMFGGVGILTYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LSHWPAVDGRYPAAAHFTAWGVLLALQLASAVWYVWPTRGAGQAH HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC >Mature Secondary Structure SSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQI CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC PAGVMLDHFGPRRVTAGMLLFAAAGAAVFGAAHSLGTMMVGRLLIGVGVSVCLGAAFKAL CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWTSWRAICFGLAVLTVIVAASIGL HHHCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAPEAKQVRHQGGIVSQFKGTWHILSSRAFWKISSFSVVTQGVFYAMQSLWVGPYLRDVA CCCHHHHHHHHCCCHHHHCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCHHHHHHH GFDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYAFCGVGMALFVATQAAIVAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHEE VPLPPAVLWAAYGMFGGVGILTYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LSHWPAVDGRYPAAAHFTAWGVLLALQLASAVWYVWPTRGAGQAH HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA